hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07140031/chunk_1/iprscan-20080502-07140031.nocrc
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Query sequence: KIAA0585
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02373.13.fs JmjC domain                                    147.8    3.2e-43   1
PF02373.13.ls JmjC domain                                    149.7    7.2e-42   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02373.13.fs   1/1     176   290 ..     1   126 []   147.8  3.2e-43
PF02373.13.ls   1/1     176   290 ..     1   126 []   149.7  7.2e-42

Alignments of top-scoring domains:
PF02373.13.fs: domain 1 of 1, from 176 to 290: score 147.8, E = 3.2e-43
                   *->wlYvGmpfSttpwHiEdqglySinylhfgapkvWYgiPseyaekfek
                      w+++G+p+S t++Hi++ g++ +++ ++ ++k+W+++P+++++++  
    KIAA0585   176    WFVMGPPRSGTGIHIDPLGTS-AWNALVQGHKRWCLFPTSTPRELI- 220  

                   lakvlskhfsaPdlnggeqpdldlrhlvtlisPkvleLrengipvyrfvQ
                     kv++++       gg+q+d+++++++ ++++++l+ ++  +++ +++Q
    KIAA0585   221 --KVTRDE-------GGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQ 261  

                   kpGEfVitfPgayHavfNlGfniaeavNF<-*
                   kpGE+V++++g++H+v+Nl+++ia+++NF   
    KIAA0585   262 KPGETVFVPGGWWHVVLNLDTTIAITQNF    290  

PF02373.13.ls: domain 1 of 1, from 176 to 290: score 149.7, E = 7.2e-42
                   *->wlYvGmpfSttpwHiEdqglySinylhfgapkvWYgiPseyaekfek
                      w+++G+p+S t++Hi++ g++ +++ ++ ++k+W+++P+++++++  
    KIAA0585   176    WFVMGPPRSGTGIHIDPLGTS-AWNALVQGHKRWCLFPTSTPRELI- 220  

                   lakvlskhfsaPdlnggeqpdldlrhlvtlisPkvleLrengipvyrfvQ
                     kv++++       gg+q+d+++++++ ++++++l+ ++  +++ +++Q
    KIAA0585   221 --KVTRDE-------GGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQ 261  

                   kpGEfVitfPgayHavfNlGfniaeavNF<-*
                   kpGE+V++++g++H+v+Nl+++ia+++NF   
    KIAA0585   262 KPGETVFVPGGWWHVVLNLDTTIAITQNF    290  

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