hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-07103936/chunk_1/iprscan-20080502-07103936.nocrc
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Query sequence: KIAA0583
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00228                                                 239.7    2.4e-67   4
SM00072                                                 200.8    1.2e-55   1
SM00326                                                  40.6    2.2e-07   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/4     666   743 ..     1    80 []    50.2  2.8e-10
SM00228    2/4     751   829 ..     1    80 []    66.7  2.9e-15
SM00228    3/4    1391  1462 ..     1    80 []    73.6  2.5e-17
SM00228    4/4    1543  1615 ..     1    80 []    49.3  5.1e-10
SM00326    1/1    1629  1693 ..     1    58 []    40.6  2.2e-07
SM00072    1/1    1755  1941 ..     1   203 []   200.8  1.2e-55

Alignments of top-scoring domains:
SM00228: domain 1 of 4, from 666 to 743: score 50.2, E = 2.8e-10
                   *->gglGfsivg...........gifvssvvpGspAakaGrkslglLkvG
                      + lGf ++++ +++  +++ gifv++v +Gs A+  Gr     L+v+
    KIAA0583   666    KALGFDMAEgvnepcfpgdcGIFVTKVDKGSIAD--GR-----LRVN 705  

                   DvIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   D +l++N+ +++ +++  +a+++l +  g      + ++v+R++   
    KIAA0583   706 DWLLRIND-VDLINKDKKQAIKALLNGEG-----AINMVVRRRK    743  

SM00228: domain 2 of 4, from 751 to 829: score 66.7, E = 2.9e-15
                   *->gglGfsivg..........gifvssvvpGspAakaGrkslglLkvGD
                       +l ++++g+++++ + ++g++ + v+pGspAak G      L vGD
    KIAA0583   751    TPLHINLSGqkdsgislenGVYAAAVLPGSPAAKEGS-----LAVGD 792  

                   vIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   +I+++NG + +++++  e   ll+++++     ++tL +l+     
    KIAA0583   793 RIVAING-IALDNKSLNECESLLRSCQD-----SLTLSLLKVF    829  

SM00228: domain 3 of 4, from 1391 to 1462: score 73.6, E = 2.5e-17
                   *->gglGfsivg....gifvssvvpGspAakaGrkslglLkvGDvIleVN
                      ++lG+siv+++++gi+vs+v  Gs A++aG      L  GD++le N
    KIAA0583  1391    EPLGISIVSgekgGIYVSKVTVGSIAHQAG------LEYGDQLLEFN 1431 

                   GetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                   G ++++++t+++a +++ + ++     ++t++ ++++   
    KIAA0583  1432 G-INLRSATEQQARLIIGQQCD-----TITILAQYNP    1462 

SM00228: domain 4 of 4, from 1543 to 1615: score 49.3, E = 5.1e-10
                   *->gglGfsivg....gifvssvvpGspAakaGrkslglLkvGDvIleVN
                        lG+ + g++ +g+fv++v+++spA    +     L +GD Ile  
    KIAA0583  1543    LELGVHLCGgnlhGVFVAEVEDDSPAKGPDG-----LVPGDLILEYG 1584 

                   GetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                      +v+++t ee+ + + k+++      v+L+v++++   
    KIAA0583  1585 S-LDVRNKTVEEVYVEMLKPRD-----GVRLKVQYRP    1615 

SM00326: domain 1 of 1, from 1629 to 1693: score 40.6, E = 2.2e-07
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks....ddgWweGelnr.
                      +y +AlYD  a+ e+ELsFkk+Di++v +  ++++ + W+  +l+ +
    KIAA0583  1629    FYIRALYDRLADVEQELSFKKDDILYVDDTLpqgtFGSWMAWQLDEn 1675 

                   ..tGkeGlfPsnYVeeie<-*
                    ++ ++G +Ps YV  +e   
    KIAA0583  1676 aqKIQRGQIPSKYVMDQE    1693 

SM00072: domain 1 of 1, from 1755 to 1941: score 200.8, E = 1.2e-55
                   *->drRpivLsGpsGvGKstlkakLlqeyPdypkfgfsVshTTRppRpgE
                      d+ ++ +++ ++v ++ l+ +L+       +++++V+ +  +  pg 
    KIAA0583  1755    DSVSLAYQRVQKVDCTALRPVLILG-----PLLDVVKEMLVNEAPGK 1796 

                   vnGPvvDYhFvsLkeefeqdiksgkflEwgeysgnlyYGTskesvrqvae
                   ++ ++ +++ +s ++++e+++k+++f++++  sg+ + +T+++s+++++e
    KIAA0583  1797 FCRCPLEVMKAS-QQAIERGVKDCLFVDYKRRSGH-FDVTTVASIKEITE 1844 

                   kGKhclLDidpqgvkqlkkarRkselnpiviFIapPsleeleerlrgaeq
                   k++hclLDi+p+++++l+++    +++piviFI+++s+++++e++  +++
    KIAA0583  1845 KNRHCLLDIAPHAIERLHHM----HIYPIVIFIHYKSAKHIKEQRD-PIY 1889 

                   RgteteeriqkrlaaaaqkeaqeyskeahlFdlvivnddledayYkeLke
                     ++ ++r++k++++aaqk++qeys   ++F++vi++  l++++ +++++
    KIAA0583  1890 LRDKVTQRHSKEQFEAAQKLEQEYS---RYFTGVIQGGALSSIC-TQILA 1935 

                   ileaeq<-*
                   ++++eq   
    KIAA0583  1936 MVNQEQ    1941 

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