hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06413280/chunk_1/iprscan-20080502-06413280.nocrc
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Query sequence: KIAA0567
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00053                                                  35.1      3e-10   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00053     1/1     283   533 ..     1   246 []    35.1    3e-10

Alignments of top-scoring domains:
SM00053: domain 1 of 1, from 283 to 533: score 35.1, E = 3e-10
                   *->mekliplvnklqdafssLGiekdLdLPqIAVvGgQSaGKSSvLEnlv
                       +    + + l d  +s   + +  LP + VvG+QSaGK SvLE + 
    KIAA0567   283    IDMYSEVLDVLSDYDASYNTQDH--LPRVVVVGDQSAGKTSVLEMIA 327  

                   GkdFLPRGsG.IVTRrPLiLkLikiPtstEykeflhykniskklqhfdEv
                        PRGsG+  TR P    L + P         +     +k ++    
    KIAA0567   328 QARIFPRGSGeMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKEEDLAAL 377  

                   rneIenetDrVtGtnkgISgvlInLrvySPyVlnLTLIDLPGitkVavgd
                   r eIe    +       +S++ I+L v  P    + L+DLPG+       
    KIAA0567   378 RHEIELRMRKNVKEGCTVSPETISLNVKGPGLQRMVLVDLPGVINTVTSG 427  

                   QPqDIeeQIKklIkkfIskeetliLaVvPaNvDlAnsdALKlAkEVDPkG
                     +D  e I  + k       ++iL +    vD   s    l    DP G
    KIAA0567   428 MAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPHG 477  

                   eRTiGviTKlDLvD..eGTdeYardileNkllPLRr.GYigVvn...RsQ
                    RTi v+TK DL  ++      +  i+e kl P+   GY  Vv +++ s 
    KIAA0567   478 RRTIFVLTKVDLAEknVASPSRIQQIIEGKLFPMKAlGYFAVVTgkgNSS 527  

                   kDIegr<-*
                     Ie     
    KIAA0567   528 ESIEAI    533  

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