hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-06395607/chunk_1/iprscan-20080502-06395607.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0566 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR01652 ATPase-Plipid: phospholipid-translocati 465.4 2.3e-137 1 TIGR01494 ATPase_P-type: ATPase, P-type (transpor 278.8 3.6e-81 5 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR01652 1/1 3 973 .. 1 1249 [] 465.4 2.3e-137 TIGR01494 4/5 521 570 .. 317 366 .. 77.2 1.6e-20 TIGR01494 5/5 662 773 .. 360 466 .. 118.5 6.1e-33 Alignments of top-scoring domains: TIGR01652: domain 1 of 1, from 3 to 973: score 465.4, E = 2.3e-137 *->FpsNkIsTtKYtvlTFlPKnLFeQFkrfANiYFLvvAllqqvPilsp K+LF vP KIAA0566 3 ------------------KSLF------------------YVP---- 9 tnrgtsivPLavVLlvtaiKeAiEDirRrkrDkevNNrltevLegveNeN + KIAA0566 10 --------------------------------------------K----- 10 vltdnIsLWRklKKFIsytkedlseelKkkrisRKRHellvtkTVdtish KIAA0566 - -------------------------------------------------- - RsSLdSidayrlSvdydrleldeinleqganeasvvdrsltgssdgkFve s KIAA0566 11 ------------------------------------------S------- 11 ikWKdlrVGDIvKVkkderiPADllLLSSSepdGvCYVETaNLDGETNLK KIAA0566 - -------------------------------------------------- - lRqAleeTqkmlteediknfsGeIecEqPnasLYsFqGnlkidgkakskI dg KIAA0566 12 ------------------------------------------DG------ 13 rqlPLspdNiLLRGctLrNTkwviGvVvYTGhDTKlmrNatkaGPsKRSr +Lsp KIAA0566 14 --SSLSP------------------------------------------- 18 iEkelNflIiiLFllLivLclissvgagiysdadgkdldlirwYleldks v+a++ys KIAA0566 19 ------------------------VTAAVYS------------------- 25 eRPGGkdYeYrnaaangFfsfltalILFssLIPISLYVslElvKsvQAty flt +I+ + LIPISLYVs+E+vK y KIAA0566 26 --------------------FLTMIIVLQVLIPISLYVSIEIVKACRV-Y 54 FInsDlemYhektDtPasvRtSNLnEeLGQVeYiFSDKTGTLTqNiMeFk FIn+D+++Y+e+tD+ ++R++N+ E+LGQ+ YiFSDKTGTLT N+M F KIAA0566 55 FINQDMQLYDEETDSQLQCRALNITEDLGQIQYIFSDKTGTLTENKMVFR 104 KcsIaGvsYgSdgltevkdalrerkgskveees................. c+ Gv Y+ + + + l++ + + eee +++++ +++++ +++ KIAA0566 105 RCTVSGVEYS-HDAN--AQRLARYQEADSEEEEvvprggsvsqrgsigsh 151 .................................................. ++ + +++++++++++++++ + ++ + ++++ +++ +++ +++++ KIAA0566 152 qsvrvvhrtqstkshrrtgsraeakrasmlskhtafsspmekditpdpkl 201 .................................................. ++ ++ +++ +++++ + +++ ++ + + ++ ++++ KIAA0566 202 lekvsecdkslavarhqehllahlspelsdvfdffialticntvvvtspd 251 ......................................akvakDknsmln +++++ + + + +++ ++ ++ ++ +++ +++ ++ a k s + KIAA0566 252 qprtkvrvrfelkspvktiedflrrftpscltsgcssiGSLAANKSSHKL 301 elkilksnsqkapkgftFvdprLvkllktaknkpnakliqeFflaLAiCH ++ + +s d L++l ++ ++p++ ++ + A KIAA0566 302 GSSFPSTPS---------SDGMLLRLEER-LGQPTSAIASNGYSSQA--D 339 tVvPevnd.dddpeKGeitYQAaSPDEaALVkaArdlGFvfieRtpksIs + e ++++ e+ Y+A+SPDEaALV+aAr++ v++eR +s KIAA0566 340 NWASELAQeQESER--ELRYEAESPDEAALVYAARAYNCVLVERLHDQVS 387 llieerGkkGkkeekeYeiLnVlEFnSdRKRMSvIvRfPdgnPGDdgril + +++ G +++e+L+ l F+S RKRMSv++R P + +i KIAA0566 388 VELPHLG------RLTFELLHTLGFDSVRKRMSVVIRHPLTD-----EIN 426 LlcKGADsVifkRLssss.....GsggnqvieeTkeHLenyAsEGLRTLc + KGADsV L s+ + +G ++ +++ +T L+ yA EGLRTLc KIAA0566 427 VYTKGADSVVMDLLQPCSsvdarGRHQKKIRSKTQNYLNVYAAEGLRTLC 476 iAyReLseeEYeeWneeYneAstaLtedReekLdevAelIEkdLiLLGaT iA R Ls+eEY W + eA ++L + ee+L A +E++L LLGaT KIAA0566 477 IAKRVLSKEEYACWLQSHLEAESSLE-NSEELLFQSAIRLETNLHLLGAT 525 AIEDKLQeGVPetIElLreAGIKiWVLTGDKvETAINIGySCrLlsenMe +IED+LQ+GVPetI +Lr+AG iWVLTGDK+ETA NI+y+C+Ll+ + e KIAA0566 526 GIEDRLQDGVPETISKLRQAGLQIWVLTGDKQETAVNIAYACKLLDHDEE 575 livIkeesddIrelEdagdldatervveaaikkiLkeyf........ele +i+++++s ++a++ a++ + L+ ++++ ++ +e + KIAA0566 576 VITLNATS-----------QEACA----ALLDQCLCYVQsrglqrapEKT 610 gteeefnelk....kdh.vpsgnvALvIDGksLkyaLdeeDlekeFLqLA ++ ++++ ++++++ ++ +LvIDG sL yaL+ le++FL LA KIAA0566 611 KGKVSMRFSSlcppSTStASGRRPSLVIDGRSLAYALEKN-LEDKFLFLA 659 lkCkAViCCRVSPsQKAdVVkLVKkstGrlskiTLAIGDGANDVSMIQeA ++C++V+CCR++P+QK+ VVkLV++ +l+++TLAIGDGANDVSMIQ A KIAA0566 660 KQCRSVLCCRSTPLQKSMVVKLVRS---KLKAMTLAIGDGANDVSMIQVA 706 DVGVGIsGkEGmQAvMASDFAIgQFrFLekLLLVHGrWSYkRiskmIlYf DVGVGIsG+EGmQAvMASDFA Fr+Le+LL HG+W+Y R++ m+lYf KIAA0566 707 DVGVGISGQEGMQAVMASDFAVPKFRYLERLLILHGHWCYSRLANMVLYF 756 FYKNlifalilFWYsfyngFsGqtlyedWymvlYNvfFTalPVivLGvfD FYKN+ f+ lFW++f+ gFs +t ++ Wy+ ++N++F +lP+ v Gv+D KIAA0566 757 FYKNTMFVGLLFWFQFFCGFSASTMIDQWYLIFFNLLFSSLPPLVTGVLD 806 qDvsaslslryPqLYreGqkgkefstkvFwgwmldglyQSlviFffpila +Dv a ++l +PqLY+ Gq+ +e+ ++Fw m d+ +QSlv+F +p+la KIAA0566 807 RDVPANVLLTNPQLYKSGQNMEEYRPRTFWFNMADAAFQSLVCFSIPYLA 856 yklgdfvssGevddfssvGvivfTalVvvvnlkiaLeinrWnwisliaiw y + +d+ +G+ + T++ ++ +l++++e+ +W+w i+ + KIAA0566 857 YYD-------SNVDLFTWGTPIVTIALLTFLLHLGIETKTWTWLNWITCG 899 gSiLvwlifvivyssifptl.....PadisrefykaakrvmstfgFWlvL +S+L ++ + +y + +t ++++P y+ +++ ++F+l+ KIAA0566 900 FSVLLFFTVALIYNASCATCyppsnP-------YWTMQALLGDPVFYLTC 942 lvivlisLLPrFtykalqrlfrPtdyeiVqE<-* l +++++LLPr +++lq + +Pt +++++ KIAA0566 943 LMTPVAALLPRLFFRSLQGRVFPTQLQLARQ 973 TIGR01494: domain 4 of 5, from 521 to 570: score 77.2, E = 1.6e-20 *->llGltaieDpLredvketIeeLkraGikvwMlTGDnveTAiaIAkec llG+t+ieD+L+++v+etI++L++aG+ +w+lTGD++eTA++IA++c KIAA0566 521 LLGATGIEDRLQDGVPETISKLRQAGLQIWVLTGDKQETAVNIAYAC 567 glf<-* +l+ KIAA0566 568 KLL 570 TIGR01494: domain 5 of 5, from 662 to 773: score 118.5, E = 6.1e-33 *->AkecglfARvsPeqKaeiVellq.krgaiVamiGDGaNDapALkaAD ++++ l++R++P+qK +V+l+++k +a++++iGDGaND+++++ AD KIAA0566 662 CRSV-LCCRSTPLQKSMVVKLVRsKLKAMTLAIGDGANDVSMIQVAD 707 VGiaig......AkaaaDivltddnlslivlllvhGRwtykrikklilya VG++i+++++ +A++a+D++ ++ ++l +ll+ hG+w+y+r++ ++ly+ KIAA0566 708 VGVGISgqegmqAVMASDFAVPKF-RYLERLLILHGHWCYSRLANMVLYF 756 lyynliliillfvlsvi<-* +y+n ++ llf+++++ KIAA0566 757 FYKNTMFVGLLFWFQFF 773 //