hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-06142592/chunk_1/iprscan-20080502-06142592.nocrc
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Query sequence: KIAA0551
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00036                                                 405.7   2.6e-117   1
SM00220                                                 336.6    1.6e-96   1
SM00219                                                  64.7    3.9e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1      50   314 ..     1   280 []    64.7  3.9e-15
SM00220    1/1      50   314 ..     1   231 []   336.6  1.6e-96
SM00036    1/1    1067  1365 ..     1   375 []   405.7 2.6e-117

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 50 to 314: score 64.7, E = 3.9e-15
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda..keeFlrEak
                       +l +  G+G +G+VykG+  ++++  A+K++    +++ee+ +E++
    KIAA0551    50    FELVELVGNGTYGQVYKGRHVktgQLAAIKVMDVTGdeEEEIKQEIN 96   

                   iMkklGgkHpNiVkLlGvcteegrr.FmevePlmivmEymegGdLldyLr
                   ++kk+  +H Ni   +G+ +++  ++   +++l++vmE++  G+  d ++
    KIAA0551    97 MLKKY-SHHRNIATYYGAFIKK--NpPGMDDQLWLVMEFCGAGSVTDLIK 143  

                   knrpk.lslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkvvK
                   ++++++l+ +   +++  I +G ++L++++++HRD+   N+L++en  vK
    KIAA0551   144 NTKGNtLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 193  

                   IsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEsl.....
                     DFG s  l+          + r  +  g+       WmAPE++  +++
    KIAA0551   194 LVDFGVSAQLDRT--------VGRRNTFIGTP-----YWMAPEVIacden 230  

                   kdgkFtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGy
                    d ++ +kSD WS G++  E+   G++P  +     m + ++l ++ +  
    KIAA0551   231 PDATYDFKSDLWSLGITAIEMAE-GAPPLCD-----MHPMRALFLIPRNP 274  

                   RlpkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                    ++             +++  + +++C   + ++RP  ++l ++ ++   
    KIAA0551   275 APRLKSK-------KWSKKFQSFIESCLVKNHSQRPATEQLmkHPFI    314  

SM00220: domain 1 of 1, from 50 to 314: score 336.6, E = 1.6e-96
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik......erilrEik
                      +el++++G G++G+Vy++r++ktg+l AiKv++ +++++e i++Ei+
    KIAA0551    50    FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDvtgdeeEEIKQEIN 96   

                   iLkk..dHPNIVkLydvfed.......dklylVmEyceGdlGdLfdllkk
                   +Lkk ++H NI ++y++f  +++++ +d l+lVmE+c+   G++ dl+k+
    KIAA0551    97 MLKKysHHRNIATYYGAFIKknppgmdDQLWLVMEFCGA--GSVTDLIKN 144  

                   rgrrglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..
                    +++     l E+++++++r+il++L +LH++++iHRD+K +N+LL+++ 
    KIAA0551   145 TKGNT----LKEeWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEna 190  

                   hvKlaDFGlArql.......ttfvGTpeYmAPEvl........gYgkpav
                   +vKl DFG+++ql+++ ++++tf+GTp++mAPEv+  +++++  Y++ ++
    KIAA0551   191 EVKLVDFGVSAQLdrtvgrrNTFIGTPYWMAPEVIacdenpdaTYDF-KS 239  

                   DiWSlGcilyElltGkpPFp..qldlifkkig............Speakd
                   D WSlG++ +E++ G pP ++ ++++ + +i +++ ++ +++++S+ + +
    KIAA0551   240 DLWSLGITAIEMAEGAPPLCdmHPMRALFLIPrnpaprlkskkwSKKFQS 289  

                   LikklLvkdPekRlta.eaLedeldikaHPff<-*
                   +i+ +Lvk+ ++R+  +++++       HPf+   
    KIAA0551   290 FIESCLVKNHSQRPATeQLMK-------HPFI    314  

SM00036: domain 1 of 1, from 1067 to 1365: score 405.7, E = 2.6e-117
                   *->naakwnhpitcdqLWGkiLLvgTeeGLYvlnisrqlnkdhegtlekl
                      +++++n++i+c++LWG++LLvgTe GL++l++s+q      g+++ l
    KIAA0551  1067    YKKRFNSEILCAALWGVNLLVGTENGLMLLDRSGQ------GKVYNL 1107 

                   isrrsvtqiwvleennvLlmisGkkpqlyshpLsaltekkltqgntpiik
                   i rr+++q++vle++nvL++isGkk +l++++Ls+l+++           
    KIAA0551  1108 INRRRFQQMDVLEGLNVLVTISGKKNKLRVYYLSWLRNR----------- 1146 

                   dalgsarlviRknvlttkipdvkGNchlcavkvngkrtgilflcaalqss
                     l+++  v++k+++ ++++d++G c++++v v+++r  i+fl+ al+ +
    KIAA0551  1147 -ILHNDPEVEKKQGW-ITVGDLEG-CIHYKV-VKYER--IKFLVIALKNA 1190 

                   VvllaqwynplkkfklvksSNNiLNNEledikkflkklivplplfvelvs
                   V+++a++++p++kf+ +ks                ++ + + pl+v+l++
    KIAA0551  1191 VEIYAWAPKPYHKFMAFKS----------------FADLQHKPLLVDLTV 1224 

                   ssfelpkvciGsdkPVGGdaggdvvqfhqdphlNslkfkeslvskedlsl
                   ++ +++kv++Gs +      g++v++++             + + +d+++
    KIAA0551  1225 EEGQRLKVIFGSHT------GFHVIDVD-------------SGNSYDIYI 1255 

                   pfaseetssddaTCkpisvvqvqasdgGqRdelLlcydefgvfVNlqGle
                   p++++  +      +p+++v+++ +dg   +e L+cy+++gv+VN++G  
    KIAA0551  1256 PSHIQGNI------TPHAIVILPKTDG---MEMLVCYEDEGVYVNTYG-- 1294 

                   vrrsrkpiltwefmpesfayve.pyllafhsngieIrsiktgelNlqela
                    r +++++l+w++mp+s+ay+ +++++++++++ieIrs++tg+l +++++
    KIAA0551  1295 -RITKDVVLQWGEMPTSVAYIHsNQIMGWGEKAIEIRSVETGHL-DGVFM 1342 

                   drsiikarkiRlLgsCeisdrkIllsssp<-*
                   ++   +a+++++L++   +++k++++s +   
    KIAA0551  1343 HK---RAQRLKFLCE---RNDKVFFASVR    1365 

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