hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-06142592/chunk_1/iprscan-20080502-06142592.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0551 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00780.12.ls CNH domain 334.5 1.6e-97 1 PF00780.12.fs CNH domain 332.8 5.6e-97 1 PF00069.15.ls Protein kinase domain 294.2 2.3e-85 1 PF00069.15.fs Protein kinase domain 292.3 8.5e-85 1 PF07714.7.fs Protein tyrosine kinase 137.0 1.2e-39 1 PF07714.7.ls Protein tyrosine kinase 131.7 1.8e-36 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.ls 1/1 50 314 .. 1 287 [] 294.2 2.3e-85 PF00069.15.fs 1/1 50 314 .. 1 287 [] 292.3 8.5e-85 PF07714.7.fs 1/1 50 270 .. 1 230 [. 137.0 1.2e-39 PF07714.7.ls 1/1 50 314 .. 1 272 [] 131.7 1.8e-36 PF00780.12.fs 1/1 1072 1363 .. 1 363 [] 332.8 5.6e-97 PF00780.12.ls 1/1 1072 1363 .. 1 363 [] 334.5 1.6e-97 Alignments of top-scoring domains: PF00069.15.ls: domain 1 of 1, from 50 to 314: score 294.2, E = 2.3e-85 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr +el+e +G G++G+Vyk++h++tg++ A+K++++ ++++++ k+ KIAA0551 50 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ--- 93 lsEiqilkrL.sHpNIvrlidvfed......kdhlylVlEycegGLrvld Ei +lk+ ++H NI +++++f +++++ +d l+lV+E+c+ G + KIAA0551 94 --EINMLKKYsHHRNIATYYGAFIKknppgmDDQLWLVMEFCGAG----S 137 LfdylsetrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNI d+++ ++++l e+ + i+++ilrgl +LH++++iHRD+K +N+ KIAA0551 138 VTDLIK-NTKGNTL--KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 184 LldnngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll... Ll +n +v K+ DFG++++l + ++ +tf GTp++mAPEv+ ++ KIAA0551 185 LLTENAEV----KLVDFGVSAQL-DrTVGrRNTFIGTPYWMAPEVIAcde 229 .ggngygtkvDvWSlGvilyelltGkpPFsgevqds.ldqlqlirkilgp + + y+ k+D WSlG++ +e++ G pP ++ ++ + l+li ++ p KIAA0551 230 nPDATYDFKSDLWSLGITAIEMAEGAPPLCDM---HpMRALFLIPRNPAP 276 plefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilq +l++ + s+ ++++i++cL k+ s+R+ e++++ KIAA0551 277 RLKSKKW----------------SKKFQSFIESCLVKNHSQRPATEQLMK 310 HPwf<-* HP++ KIAA0551 311 HPFI 314 PF00069.15.fs: domain 1 of 1, from 50 to 314: score 292.3, E = 8.5e-85 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr +el+e +G G++G+Vyk++h++tg++ A+K++++ ++++++ k+ KIAA0551 50 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ--- 93 lsEiqilkrL.sHpNIvrlidvfed......kdhlylVlEycegGLrvld Ei +lk+ ++H NI +++++f +++++ +d l+lV+E+c+ G + KIAA0551 94 --EINMLKKYsHHRNIATYYGAFIKknppgmDDQLWLVMEFCGAG----S 137 LfdylsetrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNI d+++ ++++l e+ + i+++ilrgl +LH++++iHRD+K +N+ KIAA0551 138 VTDLIK-NTKGNTL--KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV 184 LldnngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll... Ll +n +v K+ DFG++++l + ++ +tf GTp++mAPEv+ ++ KIAA0551 185 LLTENAEV----KLVDFGVSAQL-DrTVGrRNTFIGTPYWMAPEVIAcde 229 .ggngygtkvDvWSlGvilyelltGkpPFsgevqds.ldqlqlirkilgp + + y+ k+D WSlG++ +e++ G pP ++ ++ + l+li ++ p KIAA0551 230 nPDATYDFKSDLWSLGITAIEMAEGAPPLCDM---HpMRALFLIPRNPAP 276 plefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilq +l++ + s+ ++++i++cL k+ s+R+ e++++ KIAA0551 277 RLKSKKW----------------SKKFQSFIESCLVKNHSQRPATEQLMK 310 HPwf<-* HP++ KIAA0551 311 HPFI 314 PF07714.7.fs: domain 1 of 1, from 50 to 270: score 137.0, E = 1.2e-39 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie ++l + G G +G VykG+ +t++ A+K++ + + +e KIAA0551 50 FELVELVGNGTYGQVYKGRHV----KTGQLAAIKVM---DVTGDE-- 87 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpg.lyiVtEymegGd e+ +E++++kk+ +H Ni ++G+ +k Pg +++l++V+E++ G+ KIAA0551 88 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDqLWLVMEFCGAGS 137 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV d ++ g+ L+ +++ ++++i +G+++L++++ +HRD+ N+L+ KIAA0551 138 VTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 186 senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygk... +en VK DFG + ++ d + + ++ WmAPE+++ ++++ KIAA0551 187 TENAEVKLVDFGVSAQL---DRT-VGRRNTFiGTPYWMAPEVIACDEnpd 232 ..FtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlell<-* ++ kSD WS G++ E+ G++P +m + + l l+ KIAA0551 233 atYDFKSDLWSLGITAIEMAE-GAPP-LCDMHPMRALFLI 270 PF07714.7.ls: domain 1 of 1, from 50 to 314: score 131.7, E = 1.8e-36 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtLkeigaseeeie ++l + G G +G VykG+ +t++ A+K++ + + +e KIAA0551 50 FELVELVGNGTYGQVYKGRHV----KTGQLAAIKVM---DVTGDE-- 87 redFlrEAsiMkklGdHpNiVrLlGvctkegePggpg.lyiVtEymegGd e+ +E++++kk+ +H Ni ++G+ +k Pg +++l++V+E++ G+ KIAA0551 88 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDqLWLVMEFCGAGS 137 LldfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDLAARNcLV d ++ g+ L+ +++ ++++i +G+++L++++ +HRD+ N+L+ KIAA0551 138 VTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 186 senlvVKIsDFGLaRdiynddyYvrkkgggk.lPvkWmAPEslkygk... +en VK DFG + ++ d + + ++ WmAPE+++ ++++ KIAA0551 187 TENAEVKLVDFGVSAQL---DRT-VGRRNTFiGTPYWMAPEVIACDEnpd 232 ..FtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlellyedGyRLprP ++ kSD WS G++ E+ G++P +m + + l l+ ++ + KIAA0551 233 atYDFKSDLWSLGITAIEMAE-GAPP-LCDMHPMRALFLIPRNPAPRLKS 280 enCPdelYdlMlqCWaedPedRPtFsel..veeL<-* ++ +++ + + +C ++ ++RP ++l ++ ++ KIAA0551 281 KKWSKKFQSFIESCLVKNHSQRPATEQLmkHPFI 314 PF00780.12.fs: domain 1 of 1, from 1072 to 1363: score 332.8, E = 5.6e-97 *->kvnwihaitggqnLLvGTeeGLYvlnrsdqhdaflgklvkiigrrsv ++++ +a ++g+nLLvGTe GL++l+rs+q gk++ +i+rr++ KIAA0551 1072 NSEILCAALWGVNLLVGTENGLMLLDRSGQ-----GKVYNLINRRRF 1113 tqlevieelnlLllLseGKkrhLylhpLsaLetekkdtaqgsskilrlpe +q++v+e+ln+L+++s GKk++L++++Ls+L ++ KIAA0551 1114 QQMDVLEGLNVLVTIS-GKKNKLRVYYLSWL-----------------RN 1145 ktlarrfavskKipetkghCklccvgfiaegycggtkFLcvvAlksddls ++l+++++v kK ++ +++++++c++ + + y+++ kFL++ Alk KIAA0551 1146 RILHNDPEVEKKQGWITVGDLEGCIHYKVVKYERI-KFLVI-ALKN---- 1189 tsillyeWPlkeyklpnnyekllkfinrkktrfrkpkeldvpepvqsief +++y+W ++kp++++++++++ KIAA0551 1190 -AVEIYAW------------------------APKPYHKFMAFKSFADLQ 1214 lkpslcvGcskgfeillvlfgss.gfhsldleGqseaaldlllPsndlsl +kp+l++++++ +++l+v+fgs +gfh++d++ s++++d++ Ps+ KIAA0551 1215 HKPLLVDLTVEEGQRLKVIFGSHtGFHVIDVD--SGNSYDIYIPSHI--- 1259 efakklsQsvdalrakevvsaiqidrdeyLLCfsefgvfVNlqGrrsrkk +++++ +v +++ d++e L+C++++gv+VN++Gr +++ KIAA0551 1260 --------QGNITPHAIV-ILPKTDGMEMLVCYEDEGVYVNTYGRITKDV 1300 kdiselmWegaPesfayslypyllafhdngieIrsletgeltqeladrvq +l+W ++P+s+ay+ +++++++++++ieIrs+etg+l+++++++ + KIAA0551 1301 ----VLQWGEMPTSVAYIHSNQIMGWGEKAIEIRSVETGHLDGVFMHKRA 1346 tillnkirllvslrsls<-* + l+++++++++++++s KIAA0551 1347 QRLKFLCERNDKVFFAS 1363 PF00780.12.ls: domain 1 of 1, from 1072 to 1363: score 334.5, E = 1.6e-97 *->kvnwihaitggqnLLvGTeeGLYvlnrsdqhdaflgklvkiigrrsv ++++ +a ++g+nLLvGTe GL++l+rs+q gk++ +i+rr++ KIAA0551 1072 NSEILCAALWGVNLLVGTENGLMLLDRSGQ-----GKVYNLINRRRF 1113 tqlevieelnlLllLseGKkrhLylhpLsaLetekkdtaqgsskilrlpe +q++v+e+ln+L+++s GKk++L++++Ls+L ++ KIAA0551 1114 QQMDVLEGLNVLVTIS-GKKNKLRVYYLSWL-----------------RN 1145 ktlarrfavskKipetkghCklccvgfiaegycggtkFLcvvAlksddls ++l+++++v kK ++ +++++++c++ + + y+++ kFL++ Alk KIAA0551 1146 RILHNDPEVEKKQGWITVGDLEGCIHYKVVKYERI-KFLVI-ALKN---- 1189 tsillyeWPlkeyklpnnyekllkfinrkktrfrkpkeldvpepvqsief +++y+W ++kp++++++++++ KIAA0551 1190 -AVEIYAW------------------------APKPYHKFMAFKSFADLQ 1214 lkpslcvGcskgfeillvlfgss.gfhsldleGqseaaldlllPsndlsl +kp+l++++++ +++l+v+fgs +gfh++d++ s++++d++ Ps+ KIAA0551 1215 HKPLLVDLTVEEGQRLKVIFGSHtGFHVIDVD--SGNSYDIYIPSHI--- 1259 efakklsQsvdalrakevvsaiqidrdeyLLCfsefgvfVNlqGrrsrkk +++++ +v +++ d++e L+C++++gv+VN++Gr +++ KIAA0551 1260 --------QGNITPHAIV-ILPKTDGMEMLVCYEDEGVYVNTYGRITKDV 1300 kdiselmWegaPesfayslypyllafhdngieIrsletgeltqeladrvq +l+W ++P+s+ay+ +++++++++++ieIrs+etg+l+++++++ + KIAA0551 1301 ----VLQWGEMPTSVAYIHSNQIMGWGEKAIEIRSVETGHLDGVFMHKRA 1346 tillnkirllvslrsls<-* + l+++++++++++++s KIAA0551 1347 QRLKFLCERNDKVFFAS 1363 //