hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05503722/chunk_1/iprscan-20080502-05503722.nocrc
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Query sequence: KIAA0537
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 366.7   1.5e-105   1
SM00219                                                  93.6    2.4e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1      92   341 ..     1   280 []    93.6  2.4e-23
SM00220    1/1      92   343 ..     1   231 []   366.7 1.5e-105

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 92 to 341: score 93.6, E = 2.4e-23
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda......keeFl
                       +l ++LG G +G+V ++t + +++ VA+K++++d+ ++++++  ++
    KIAA0537    92    YELQETLGKGTYGKVKRATERfsgRVVAIKSIRKDKikdeqdMVHIR 138  

                   rEakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLld
                   rE++iM++l  +Hp+i+ ++ v   +       + + i+mEy+++G L d
    KIAA0537   139 REIEIMSSL--NHPHIISIYEVFENK-------DKIVIIMEYASKGELYD 179  

                   yLrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkv
                   y+ ++r+ ls ++  +f  QI +   Y +++++vHRDL   N+L+++n  
    KIAA0537   180 YISERRR-LSERETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDNCN 228  

                   vKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdg
                   +KI+DFGLs     d      k   +     +g    P+   +PE  + +
    KIAA0537   229 IKIADFGLSNLYQKD------KFLQTF----CG---SPL-YASPEIVNGR 264  

                   kF.tskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyRl
                    ++ ++ D W+ GVlL+  + +G +P  g      + + +++++ +G+++
    KIAA0537   265 PYrGPEVDSWALGVLLY-TLVYGTMPFDG-----FDHKNLIRQISSGEYR 308  

                   pkPendlpiSsvtCPdelYd.lMlqCWaedPedRPtFselverl<-*
                   ++ +               ++l+++  + +P+ R t +++   +   
    KIAA0537   309 EPTQP-----------SDARgLIRWMLMVNPDRRATIEDIANHW    341  

SM00220: domain 1 of 1, from 92 to 343: score 366.7, E = 1.5e-105
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik..........eril
                      Yel ++lGkG++GkV++a+++ +gr+vAiK i++++ +++++  +i+
    KIAA0537    92    YELQETLGKGTYGKVKRATERFSGRVVAIKSIRkdkikdeqdmVHIR 138  

                   rEikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgr
                   rEi+i+++ +HP+I+ +y+vfe++dk+ ++mEy++   G+L+d++ +r+r
    KIAA0537   139 REIEIMSSlNHPHIISIYEVFENkDKIVIIMEYASK--GELYDYISERRR 186  

                   rglrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvK
                         lsE+e+r++frQi+sa+ Y+H++g++HRDLK eNiLLd++ ++K
    KIAA0537   187 ------LSErETRHFFRQIVSAVHYCHKNGVVHRDLKLENILLDDncNIK 230  

                   laDFGlArql......ttfvGTpeYmAPEvl...gYgkpavDiWSlGcil
                   +aDFGl+ ++++++   tf+G+p Y +PE++++++Y +p+vD W+lG++l
    KIAA0537   231 IADFGLSNLYqkdkflQTFCGSPLYASPEIVngrPYRGPEVDSWALGVLL 280  

                   yElltGkpPFp..qldlifkkig.........SpeakdLikklLvkdPek
                   y l++G  PF++ +++ ++++i ++++++++ +++a+ Li+ +L ++P++
    KIAA0537   281 YTLVYGTMPFDgfDHKNLIRQISsgeyreptqPSDARGLIRWMLMVNPDR 330  

                   Rlta.eaLedeldikaHPff<-*
                   R t++++ +       H ++   
    KIAA0537   331 RATIeDIAN-------HWWV    343  

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