hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05485450/chunk_1/iprscan-20080502-05485450.nocrc
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Query sequence: KIAA0536
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.fs Protein kinase domain                       156.6    2.2e-44   2
PF00069.15.ls Protein kinase domain                       153.3    5.9e-43   1
PF07714.7.fs Protein tyrosine kinase                      17.6    5.2e-05   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/2     708   928 ..     1   234 [.   131.7  2.7e-37
PF00069.15.ls   1/1     708  1024 ..     1   287 []   153.3  5.9e-43
PF07714.7.fs   1/1     841   921 ..   143   229 ..    17.6  5.2e-05
PF00069.15.fs   2/2     997  1024 ..   260   287 .]    25.0  5.7e-07

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 2, from 708 to 928: score 131.7, E = 2.7e-37
                   *->yelleklGsGsfGtVykak.hkgtgkiVAvKiikkrkekskkdktar
                      y + +  G+G f+ V +a+++   +++VAvKii+   +++ ++kt +
    KIAA0536   708    YNVYGYTGQGVFSNVVRARdNARANQEVAVKIIR---NNELMQKTGL 751  

                   rlsEiqilkrLs........HpNIvrlidvfedkdhlylVlEycegGLrv
                   +  E++ lk+L++ +++++ H+  +rl++ f+ k+hl+lV+E + +    
    KIAA0536   752 K--ELEFLKKLNdadpddkfHC--LRLFRHFYHKQHLCLVFEPLSM---- 793  

                   ldLfdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKP
                     L ++l+   ++g+  ++  + ++++  Q++ +l+ L +++i+H D+KP
    KIAA0536   794 -NLREVLK---KYGKDVgLHIKAVRSYSQQLFLALKLLKRCNILHADIKP 839  

                   eNILldnngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll
                   +NIL+++  ++   lK++DFG+A    +  + + t + ++++Y+APE++ 
    KIAA0536   840 DNILVNESKTI---LKLCDFGSAS---HvADNdITPYLVSRFYRAPEIII 883  

                   ggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpp<
                    g+ y++ +D+WS+G++lyel+tGk +F+g+   +++++ +++++l+++ 
    KIAA0536   884 -GKSYDYGIDMWSVGCTLYELYTGKILFPGK---TNNHMLKLAMDLKGK  928  

                   -*
                     
    KIAA0536     -    -    

PF00069.15.ls: domain 1 of 1, from 708 to 1024: score 153.3, E = 5.9e-43
                   *->yelleklGsGsfGtVykak.hkgtgkiVAvKiikkrkekskkdktar
                      y + +  G+G f+ V +a+++   +++VAvKii+   +++ ++kt +
    KIAA0536   708    YNVYGYTGQGVFSNVVRARdNARANQEVAVKIIR---NNELMQKTGL 751  

                   rlsEiqilkrLs........HpNIvrlidvfedkdhlylVlEycegGLrv
                   +  E++ lk+L++ +++++ H+  +rl++ f+ k+hl+lV+E + +    
    KIAA0536   752 K--ELEFLKKLNdadpddkfHC--LRLFRHFYHKQHLCLVFEPLSM---- 793  

                   ldLfdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKP
                     L ++l+   ++g+  ++  + ++++  Q++ +l+ L +++i+H D+KP
    KIAA0536   794 -NLREVLK---KYGKDVgLHIKAVRSYSQQLFLALKLLKRCNILHADIKP 839  

                   eNILldnngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvll
                   +NIL+++  ++   lK++DFG+A    +  + + t + ++++Y+APE++ 
    KIAA0536   840 DNILVNESKTI---LKLCDFGSAS---HvADNdITPYLVSRFYRAPEIII 883  

                   ggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgppl
                    g+ y++ +D+WS+G++lyel+tGk +F+g+   +++++ +++++l+++ 
    KIAA0536   884 -GKSYDYGIDMWSVGCTLYELYTGKILFPGK---TNNHMLKLAMDLKGK- 928  

                   efdspewdsisrse.fr.................................
                             ++ + +r++  ++++ +++ +    + ++ +++++ +  +
    KIAA0536   929 ----------MPNKmIRkgvfkdqhfdqnlnfmyievdkvterekvtvms 968  

                   ...................r.l.pnlseeakdLikkcLnkDPskRltaee
                   + +++++   +  + ++ +++ ++++++ +kdL++ +L +DP+kR+++ +
    KIAA0536   969 tinptkdlladligcqrlpEdQrKKVHQ-LKDLLDQILMLDPAKRISINQ 1017 

                   ilqHPwf<-*
                   +lqH ++   
    KIAA0536  1018 ALQHAFI    1024 

PF07714.7.fs: domain 1 of 1, from 841 to 921: score 17.6, E = 5.2e-05
                   *->NcLVsenl.vVKIsDFGLaRdiynddyY.vrkkgggklPvkWmAPEs
                      N+LV+e++++ K +DFG a  + + d  ++ ++       +  APE 
    KIAA0536   841    NILVNESKtILKLCDFGSASHVADNDITpYLVSR------FYRAPEI 881  

                   lkygkFtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlel<-*
                   +  + +    D WS G++L+E++t G++  +pg +n+ +l+l   
    KIAA0536   882 IIGKSYDYGIDMWSVGCTLYELYT-GKIL-FPGKTNNHMLKL    921  

PF00069.15.fs: domain 2 of 2, from 997 to 1024: score 25.0, E = 5.7e-07
                   *->akdLikkcLnkDPskRltaeeilqHPwf<-*
                      +kdL++ +L +DP+kR+++ ++lqH ++   
    KIAA0536   997    LKDLLDQILMLDPAKRISINQALQHAFI    1024 

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