hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05385105/chunk_1/iprscan-20080502-05385105.nocrc
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Query sequence: KIAA0531
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00129                                                 591.5   3.1e-173   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00129     1/1      48   377 ..     1   404 []   591.5 3.1e-173

Alignments of top-scoring domains:
SM00129: domain 1 of 1, from 48 to 377: score 591.5, E = 3.1e-173
                   *->kgnIrVavRvdrdRPlnkrEksekakeespsvvtv....tvtvn...
                      +++I+V +R+   RPln+ E+ ++     + + ++++++tv++ +++
    KIAA0531    48    ECSIKVMCRF---RPLNEAEILRG----DKFIPKFkgdeTVVIGqgk 87   

                   .FtFDkVFWrydvddpsasQedVFeevaaPLvdsaldGYNvaTIFAYGQT
                   ++ FD+V       +p+++Qe+V++ +a+++v ++l+GYN+ TIFAYGQT
    KIAA0531    88 pYVFDRVL------PPNTTQEQVYNACAKQIVKDVLEGYNG-TIFAYGQT 130  

                   GSGKTyTMsGtptdpgilsndladitpdepGiIPRaledlFekide....
                    SGKT+TM+G   dp            + +GiIPR+ +d+F++i + +++
    KIAA0531   131 SSGKTHTMEGKLHDP------------QLMGIIPRIAHDIFDHIYSmden 168  

                   ..fsVkvSylEIYNEkirDLLspspenSksrGkhakqsskkkLrirEdkn
                    +f++kvSy+EIY +kirDLL+ s++n               L ++Edkn
    KIAA0531   169 leFHIKVSYFEIYLDKIRDLLDVSKTN---------------LAVHEDKN 203  

                   gnrhdapkLtrlrgqggvyVvGLtevsVsSaeevlellerGnknRtvaaT
                                  + +yV+G+te+ VsS+eev++++++G++nR+va T
    KIAA0531   204 ---------------RVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVT 238  

                   kmNeeSSRSHaiFtitleqkeklepiadektesstnegteqiksskLnLV
                   +mNe+SSRSH+iF i ++q+               n +te ++s+kL+LV
    KIAA0531   239 NMNEHSSRSHSIFLINIKQE---------------NVETEKKLSGKLYLV 273  

                   DLAGSERaskTgseaeGdRLkEaqnINkSLlaLGnVInALaddshdsaes
                   DLAGSE++skTg  aeG  L Ea+nINkSL+aLGnVI+ALa+        
    KIAA0531   274 DLAGSEKVSKTG--AEGAVLDEAKNINKSLSALGNVISALAE-------- 313  

                   eatkqaggkssHIPYRDSKLTrLLQdSLGGNsKTlMIanvSPsssnyeET
                          g ++H+PYRDSK Tr+LQdSLGGN++T++++++SPs  n +ET
    KIAA0531   314 -------GTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAET 356  

                   lsTLrFAsRaksIknkpavne<-*
                    sTL F++Rak+Ikn+++vn    
    KIAA0531   357 KSTLMFGQRAKTIKNTVSVNL    377  

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