hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05385105/chunk_1/iprscan-20080502-05385105.nocrc
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Query sequence: KIAA0531
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00225.13.ls Kinesin motor domain                           575.3   5.3e-170   1
PF00225.13.fs Kinesin motor domain                           573.7   1.7e-169   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00225.13.fs   1/1      56   370 ..     1   424 []   573.7 1.7e-169
PF00225.13.ls   1/1      56   370 ..     1   424 []   575.3 5.3e-170

Alignments of top-scoring domains:
PF00225.13.fs: domain 1 of 1, from 56 to 370: score 573.7, E = 1.7e-169
                   *->RvRPlnerEksrgssdvvnvsedvessvitn.gkektFtFDkVFdpe
                      R+RPlne E+ rg +++    ++ +++ +   g+ k ++FD+V +p+
    KIAA0531    56    RFRPLNEAEILRGDKFI----PKFKGDETVViGQGKPYVFDRVLPPN 98   

                   atQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKTYTMe
                   +t         qe+vy+ +ak++v++vleGyN+tIFAYGQT SGKT+TMe
    KIAA0531    99 TT---------QEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGKTHTME 139  

                   GstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpvfKPk
                   G+                +++ +GiiPR+ +d+F++i             
    KIAA0531   140 GKLH--------------DPQLMGIIPRIAHDIFDHI------------- 162  

                   lnekgwellncqetligvsfdtrglsSdly.v.edlefsvkvSylEIYNE
                                                y+++e+lef++kvSy+EIY  
    KIAA0531   163 -----------------------------YsMdENLEFHIKVSYFEIYLD 183  

                   kirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGLte
                   kirDLL+ s             k++  L ++eD++r      +yVkG+te
    KIAA0531   184 KIRDLLDVS-------------KTN--LAVHEDKNR-----VPYVKGCTE 213  

                   veVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntdtt
                     V+s+eev++++++G +nR+va T+mNe+SSRSH+iF i ++q+n +t+
    KIAA0531   214 RFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQENVETE 263  

                   gsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaanI
                                  +++kL+LVDLAGSE++skTg   A+g  L Ea+nI
    KIAA0531   264 KK-------------LSGKLYLVDLAGSEKVSKTG---AEGAVLDEAKNI 297  

                   NkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlMIa
                   NkSLsaLGnVI+ALa++  ++H+PYRDSK Tr+LQDSLGG  N++T ++ 
    KIAA0531   298 NKSLSALGNVISALAEG-TKTHVPYRDSKMTRILQDSLGG--NCRTTIVI 344  

                   niSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   ++SPs      n  ET sTL F++RAK Ik   
    KIAA0531   345 CCSPSVF----NEAETKSTLMFGQRAKTIK    370  

PF00225.13.ls: domain 1 of 1, from 56 to 370: score 575.3, E = 5.3e-170
                   *->RvRPlnerEksrgssdvvnvsedvessvitn.gkektFtFDkVFdpe
                      R+RPlne E+ rg +++    ++ +++ +   g+ k ++FD+V +p+
    KIAA0531    56    RFRPLNEAEILRGDKFI----PKFKGDETVViGQGKPYVFDRVLPPN 98   

                   atQelsepYAsqefvyestakplvesvleGyNvtIFAYGQTGSGKTYTMe
                   +t         qe+vy+ +ak++v++vleGyN+tIFAYGQT SGKT+TMe
    KIAA0531    99 TT---------QEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGKTHTME 139  

                   GstdsdksspnpsdsCttpeeepGiiPRaledlFerieerkerkpvfKPk
                   G+                +++ +GiiPR+ +d+F++i             
    KIAA0531   140 GKLH--------------DPQLMGIIPRIAHDIFDHI------------- 162  

                   lnekgwellncqetligvsfdtrglsSdly.v.edlefsvkvSylEIYNE
                                                y+++e+lef++kvSy+EIY  
    KIAA0531   163 -----------------------------YsMdENLEFHIKVSYFEIYLD 183  

                   kirDLLspsppqrgspskdnekkkkkpLrireDpkrGgkmdgvyVkGLte
                   kirDLL+ s             k++  L ++eD++r      +yVkG+te
    KIAA0531   184 KIRDLLDVS-------------KTN--LAVHEDKNR-----VPYVKGCTE 213  

                   veVtsaeevlelLelGnknRtvasTkmNeeSSRSHaiFtitveqrntdtt
                     V+s+eev++++++G +nR+va T+mNe+SSRSH+iF i ++q+n +t+
    KIAA0531   214 RFVSSPEEVMDVIDEGKANRHVAVTNMNEHSSRSHSIFLINIKQENVETE 263  

                   gsvvtgkdnsgeesvrvskLnLVDLAGSERaskTgatgAggrRLkEaanI
                                  +++kL+LVDLAGSE++skTg   A+g  L Ea+nI
    KIAA0531   264 KK-------------LSGKLYLVDLAGSEKVSKTG---AEGAVLDEAKNI 297  

                   NkSLsaLGnVInALadnqkssHiPYRDSKLTrLLQDSLGGGDNsKTlMIa
                   NkSLsaLGnVI+ALa++  ++H+PYRDSK Tr+LQDSLGG  N++T ++ 
    KIAA0531   298 NKSLSALGNVISALAEG-TKTHVPYRDSKMTRILQDSLGG--NCRTTIVI 344  

                   niSPsssrNntnyeETLsTLrFAsRAKnIk<-*
                   ++SPs      n  ET sTL F++RAK Ik   
    KIAA0531   345 CCSPSVF----NEAETKSTLMFGQRAKTIK    370  

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