hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-05271960/chunk_1/iprscan-20080502-05271960.nocrc
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Query sequence: KIAA0524
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00454                                                 129.1    4.8e-34   2
SM00255                                                  89.2    4.9e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00454    1/2     283   350 ..     1    67 []    79.0  5.9e-19
SM00454    2/2     353   422 ..     1    67 []    50.1  2.8e-10
SM00255    1/1     435   576 ..     1   147 []    89.2  4.9e-22

Alignments of top-scoring domains:
SM00454: domain 1 of 2, from 283 to 350: score 79.0, E = 5.9e-19
                   *->vs.wspesVaeWLesigleqYadnFrkngidgeelllltseedLkel
                      v++w++ +V+ WL+ ig+++Y++ Fr++++dg++ll+lt+ee+ ++l
    KIAA0524   283    VPsWKEAEVQTWLQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDL 329  

                   GitllGhRkkIlsaiqklkeq<-*
                   G+++   Rk++++++ +lk++   
    KIAA0524   330 GMKSGITRKRFFRELTELKTF    350  

SM00454: domain 2 of 2, from 353 to 422: score 50.1, E = 2.8e-10
                   *->vs.wspesVaeWLesigleq..YadnFrkngidgeelllltseedLk
                      +s+++ +++a+WL s++   ++Y++ + ++g+d ++l++ +++++L+
    KIAA0524   353    YStCDRSNLADWLGSLDPRFrqYTYGLVSCGLDRSLLHRVSEQQLLE 399  

                   elGitllGhRkkIlsaiqklkeq<-*
                   ++Gi+l  hR +Il a ++++++   
    KIAA0524   400 DCGIHLGVHRARILTAAREMLHS    422  

SM00255: domain 1 of 1, from 435 to 576: score 89.2, E = 4.9e-22
                   *->eydvFiSfrgdeedvrnefvshLlkalrgkgklcvFiDdfepgggda
                      ++dvFiS+r+ + + +++ +  ++ +l+g+    vFiD++ +++g++
    KIAA0524   435    TPDVFISYRR-NSGSQLASLLKVHLQLHGF---SVFIDVEKLEAGKF 477  

                   enkllpelfeaIekSriaivvlSpnYaeSeWCld.lElvaalecale..g
                   e+k    l++++  +r +++vlSp  ++ +++++++  + ++e ++  ++
    KIAA0524   478 EDK----LIQSVMGARNFVLVLSPGALDKCMQDHdCKDWVHKEIVTAlsC 523  

                   glrvIPIfyevi.sdvrkqtgkfgkvfkkngpedtylkwted....fWkk
                   g++++PI+ + +  ++ ++++++++v+++n      +kw+++ ++   +k
    KIAA0524   524 GKNIVPIIDGFEwPEPQVLPEDMQAVLTFN-----GIKWSHEyqeaTIEK 568  

                   alysvpnk<-*
                     ++++ +   
    KIAA0524   569 IIRFLQGR    576  

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