# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh00345.fasta.nr -Q ../query/KIAA0510.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0510, 95 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826671 sequences Expectation_n fit: rho(ln(x))= 4.9076+/-0.000184; mu= 6.5714+/- 0.010 mean_var=72.4598+/-13.831, 0's: 37 Z-trim: 37 B-trim: 0 in 0/66 Lambda= 0.150670 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|28375503|emb|CAD66575.1| unnamed protein produc ( 598) 438 103.6 2.9e-20 gi|119586817|gb|EAW66413.1| hypothetical protein F ( 606) 438 103.6 3e-20 gi|10440440|dbj|BAB15753.1| FLJ00056 protein [Homo (1310) 438 103.9 5.2e-20 gi|119586816|gb|EAW66412.1| hypothetical protein F (1471) 438 103.9 5.7e-20 gi|119586815|gb|EAW66411.1| hypothetical protein F (1498) 438 103.9 5.8e-20 gi|50843837|ref|NP_060541.3| hypothetical protein (1519) 438 103.9 5.8e-20 gi|166200296|sp|Q8TER5.2|SOLO_HUMAN RecName: Full= (1519) 438 103.9 5.8e-20 gi|18676462|dbj|BAB84883.1| FLJ00128 protein [Homo (1546) 438 103.9 5.9e-20 gi|109082757|ref|XP_001095724.1| PREDICTED: simila (1708) 420 100.1 9.6e-19 gi|194207044|ref|XP_001918331.1| PREDICTED: simila (1523) 381 91.5 3.1e-16 gi|119902128|ref|XP_605753.3| PREDICTED: similar t (1730) 373 89.9 1.1e-15 gi|73978117|ref|XP_532621.2| PREDICTED: similar to (1619) 357 86.4 1.2e-14 gi|74141017|dbj|BAE22088.1| unnamed protein produc ( 537) 322 78.3 1.1e-12 gi|74188786|dbj|BAE28120.1| unnamed protein produc (1015) 325 79.2 1.1e-12 gi|74212820|dbj|BAE33372.1| unnamed protein produc ( 401) 320 77.8 1.1e-12 gi|37748142|gb|AAH59018.1| E130112L23Rik protein [ (1469) 325 79.4 1.4e-12 gi|148710325|gb|EDL42271.1| RIKEN cDNA E130112L23, (1488) 325 79.4 1.4e-12 gi|148710321|gb|EDL42267.1| RIKEN cDNA E130112L23, (1517) 325 79.4 1.4e-12 gi|123788266|sp|Q3UPH7.1|SOLO_MOUSE RecName: Full= (1517) 325 79.4 1.4e-12 gi|148710323|gb|EDL42269.1| RIKEN cDNA E130112L23, (1521) 325 79.4 1.4e-12 gi|148710322|gb|EDL42268.1| RIKEN cDNA E130112L23, (1524) 325 79.4 1.4e-12 gi|149033660|gb|EDL88458.1| similar to FLJ00128 pr ( 284) 316 76.8 1.6e-12 gi|47847428|dbj|BAD21386.1| mFLJ00128 protein [Mus (1517) 320 78.3 3.1e-12 gi|149033658|gb|EDL88456.1| similar to FLJ00128 pr (1324) 316 77.4 5.1e-12 gi|149033656|gb|EDL88454.1| similar to FLJ00128 pr (1331) 316 77.4 5.1e-12 gi|109502333|ref|XP_001075554.1| PREDICTED: simila (1569) 316 77.4 5.7e-12 gi|109501579|ref|XP_341310.3| PREDICTED: similar t (1646) 316 77.4 5.9e-12 gi|126278006|ref|XP_001379443.1| PREDICTED: hypoth (1628) 232 59.2 1.8e-06 >>gi|28375503|emb|CAD66575.1| unnamed protein product [H (598 aa) initn: 430 init1: 430 opt: 438 Z-score: 520.0 bits: 103.6 E(): 2.9e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:403-474) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|283 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 380 390 400 410 420 430 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|283 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 440 450 460 470 480 490 90 KIAA05 QWKQKSSFY gi|283 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 500 510 520 530 540 550 >>gi|119586817|gb|EAW66413.1| hypothetical protein FLJ10 (606 aa) initn: 430 init1: 430 opt: 438 Z-score: 519.9 bits: 103.6 E(): 3e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:362-433) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|119 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 340 350 360 370 380 390 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|119 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 400 410 420 430 440 450 90 KIAA05 QWKQKSSFY gi|119 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 460 470 480 490 500 510 >>gi|10440440|dbj|BAB15753.1| FLJ00056 protein [Homo sap (1310 aa) initn: 430 init1: 430 opt: 438 Z-score: 515.4 bits: 103.9 E(): 5.2e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:153-224) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|104 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 130 140 150 160 170 180 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|104 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 190 200 210 220 230 240 90 KIAA05 QWKQKSSFY gi|104 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 250 260 270 280 290 300 >>gi|119586816|gb|EAW66412.1| hypothetical protein FLJ10 (1471 aa) initn: 430 init1: 430 opt: 438 Z-score: 514.8 bits: 103.9 E(): 5.7e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:362-433) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|119 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 340 350 360 370 380 390 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|119 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 400 410 420 430 440 450 90 KIAA05 QWKQKSSFY gi|119 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 460 470 480 490 500 510 >>gi|119586815|gb|EAW66411.1| hypothetical protein FLJ10 (1498 aa) initn: 430 init1: 430 opt: 438 Z-score: 514.7 bits: 103.9 E(): 5.8e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:362-433) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|119 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 340 350 360 370 380 390 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|119 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 400 410 420 430 440 450 90 KIAA05 QWKQKSSFY gi|119 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 460 470 480 490 500 510 >>gi|50843837|ref|NP_060541.3| hypothetical protein LOC5 (1519 aa) initn: 430 init1: 430 opt: 438 Z-score: 514.6 bits: 103.9 E(): 5.8e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:362-433) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|508 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 340 350 360 370 380 390 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|508 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 400 410 420 430 440 450 90 KIAA05 QWKQKSSFY gi|508 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 460 470 480 490 500 510 >>gi|166200296|sp|Q8TER5.2|SOLO_HUMAN RecName: Full=Prot (1519 aa) initn: 430 init1: 430 opt: 438 Z-score: 514.6 bits: 103.9 E(): 5.8e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:362-433) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|166 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 340 350 360 370 380 390 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|166 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 400 410 420 430 440 450 90 KIAA05 QWKQKSSFY gi|166 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 460 470 480 490 500 510 >>gi|18676462|dbj|BAB84883.1| FLJ00128 protein [Homo sap (1546 aa) initn: 430 init1: 430 opt: 438 Z-score: 514.5 bits: 103.9 E(): 5.9e-20 Smith-Waterman score: 438; 90.278% identity (93.056% similar) in 72 aa overlap (1-68:389-460) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|186 EVSEPPAEAVGEASGSCPLRPGELRGGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 360 370 380 390 400 410 40 50 60 70 80 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHA----HFIKEVEMEKDYVLSIQVKVKKH :::::::::::::::::::::::::::::::: :..:: gi|186 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHKLPECHLVKEEYEGSGKPESEPKELKTA 420 430 440 450 460 470 90 KIAA05 QWKQKSSFY gi|186 GEKEPQLSEACGPTEEGAGERELEGPGLLCMAGHTGPEGPLSDTPTPPLETVQEGKGDNI 480 490 500 510 520 530 >>gi|109082757|ref|XP_001095724.1| PREDICTED: similar to (1708 aa) initn: 462 init1: 420 opt: 420 Z-score: 492.8 bits: 100.1 E(): 9.6e-19 Smith-Waterman score: 420; 96.774% identity (100.000% similar) in 62 aa overlap (1-62:550-611) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|109 LEVSEPPAEAVGEASESCPLRPGELRGGGGGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 520 530 540 550 560 570 40 50 60 70 80 90 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHAHFIKEVEMEKDYVLSIQVKVKKHQWKQ :::::::::::::::.::::::::::::::.: gi|109 SRGGDSAPLSPGDKEEASHQEALGNLPSPSDHKLPECSLVKEEYEDSGKPDSEPKEFKTA 580 590 600 610 620 630 KIAA05 KSSFY gi|109 GEKEPQPSEACGPTEEDAREREQEGPGLVCMAGHAGPEGLLSDTPTPLLETVQEGKADSI 640 650 660 670 680 690 >>gi|194207044|ref|XP_001918331.1| PREDICTED: similar to (1523 aa) initn: 381 init1: 381 opt: 381 Z-score: 447.6 bits: 91.5 E(): 3.1e-16 Smith-Waterman score: 381; 88.710% identity (95.161% similar) in 62 aa overlap (1-62:371-432) 10 20 30 KIAA05 GQGAEGPPGTPRRTGKGNRRKKRAAGRGAL :::::::::::::::::::::::::::::: gi|194 ALEVSEPPAEALGEASESCPLRPGEVGGGAGQGAEGPPGTPRRTGKGNRRKKRAAGRGAL 350 360 370 380 390 400 40 50 60 70 80 90 KIAA05 SRGGDSAPLSPGDKEDASHQEALGNLPSPSEHAHFIKEVEMEKDYVLSIQVKVKKHQWKQ ::::::.:::: :::..:::::: ::: :.:: gi|194 SRGGDSTPLSPEDKEETSHQEALVNLPPPNEHQLPGRSPSKEEHEGLGKPESDLKEELKP 410 420 430 440 450 460 KIAA05 KSSFY gi|194 AGEKEPWPPEACGPIEERAREREQEGPSLVSMAGPTGPEELLSDPPTPPLETVQEVKEDS 470 480 490 500 510 520 95 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Thu Mar 5 03:02:26 2009 done: Thu Mar 5 03:08:49 2009 Total Scan time: 905.430 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]