hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-04143747/chunk_1/iprscan-20080502-04143747.nocrc
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Query sequence: KIAA0480
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01302.15.ls CAP-Gly domain                                 128.3    1.9e-35   1
PF01302.15.fs CAP-Gly domain                                 126.5    7.1e-35   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01302.15.fs   1/1     670   735 ..     1    74 []   126.5  7.1e-35
PF01302.15.ls   1/1     670   735 ..     1    74 []   128.3  1.9e-35

Alignments of top-scoring domains:
PF01302.15.fs: domain 1 of 1, from 670 to 735: score 126.5, E = 7.1e-35
                   *->iGsRVevggggeedrrGtVRYvGetdfapGtniWvGVELDePlrGKN
                      iG+RV++g+    + +G++R+ Get+fa+G   W+GVELD+P+ G+N
    KIAA0480   670    IGDRVLIGN----VQPGILRFKGETSFAKGF--WAGVELDKPE-GNN 709  

                   DGsvkGvrYFqCegpkyGiFvrpskve<-*
                   +G+++G+ YF+C+ +k+GiF++p+k++   
    KIAA0480   710 NGTYDGIAYFECK-EKHGIFAPPQKIS    735  

PF01302.15.ls: domain 1 of 1, from 670 to 735: score 128.3, E = 1.9e-35
                   *->iGsRVevggggeedrrGtVRYvGetdfapGtniWvGVELDePlrGKN
                      iG+RV++g+    + +G++R+ Get+fa+G   W+GVELD+P+ G+N
    KIAA0480   670    IGDRVLIGN----VQPGILRFKGETSFAKGF--WAGVELDKPE-GNN 709  

                   DGsvkGvrYFqCegpkyGiFvrpskve<-*
                   +G+++G+ YF+C+ +k+GiF++p+k++   
    KIAA0480   710 NGTYDGIAYFECK-EKHGIFAPPQKIS    735  

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