hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-04044428/chunk_1/iprscan-20080502-04044428.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0474 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00390 48.6 8e-10 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00390 1/1 96 118 .. 1 23 [] 48.6 8e-10 Alignments of top-scoring domains: SM00390: domain 1 of 1, from 96 to 118: score 48.6, E = 8e-10 *->dEdlfdlllrmQssRmDDQRcel<-* + dlf+++++mQ+sRmD+QRc++ KIAA0474 96 NTDLFEMIEKMQGSRMDEQRCSF 118 //