hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03320123/chunk_1/iprscan-20080502-03320123.nocrc
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Query sequence: KIAA0456
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00324                                                 210.8    1.2e-58   1
SM00055                                                  74.9      1e-17   1
SM00326                                                  65.3    7.8e-15   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00055    1/1      46   144 ..     1   103 []    74.9    1e-17
SM00324    1/1     526   700 ..     1   193 []   210.8  1.2e-58
SM00326    1/1     755   810 ..     1    58 []    65.3  7.8e-15

Alignments of top-scoring domains:
SM00055: domain 1 of 1, from 46 to 144: score 74.9, E = 1e-17
                   *->mgfwselwsddGfeaLlsrlknglrlledlkkflreRakiEeeYAkk
                      ++++ +l   +++++L ++ +  ++ll+dl+ f+r++a+iE++Y+++
    KIAA0456    46    KEIRAQL--TEQMKCLDQQCELRVQLLQDLQDFFRKKAEIEMDYSRN 90   

                   Lqklskkyfnkkssvgdlravreteselgslkkswevllsetdalakshl
                   L kl+++++ k   +++ +++++++ +l+++ ++w+ ll ++ ++++ h 
    KIAA0456    91 LEKLAERFLAKTR-STKDQQFKKDQNVLSPV-NCWNLLLNQVKRESRDHT 138  

                   qlsedL<-*
                   +ls+ +   
    KIAA0456   139 TLSDIY    144  

SM00324: domain 1 of 1, from 526 to 700: score 210.8, E = 1.2e-58
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      + iP++ve+Ci+++ ++Gl+ eGI+RvsGs+ +v+ +++af++ged+
    KIAA0456   526    QAIPLVVESCIRFISRHGLQHEGIFRVSGSQVEVNDIKNAFERGEDp 572  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                               + d +++d  ++Ag+LKly+R L +PL++++ +++++ 
    KIAA0456   573 L-----------AGDQNDHDMDSIAGVLKLYFRGLEHPLFPKDIFHDLMA 611  

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                   +  +              ++ +er  ++r++l  LP+  +  +ryL+ +L
    KIAA0456   612 CVTM--------------DNLQERALHIRKVLLVLPKTTLIIMRYLFaFL 647  

                   nrVaehsevNkMtarNLAivFgPtLlrpp.....ltdikhqnkvvetlie
                   n+++++se+N+M++ NLAi+FgP+L+  p++++++++ +h+n++++t+i 
    KIAA0456   648 NHLSQFSEENMMDPYNLAICFGPSLMSVPeghdqVSCQAHVNELIKTIII 697  

                   nad<-*
                   +++   
    KIAA0456   698 QHE    700  

SM00326: domain 1 of 1, from 755 to 810: score 65.3, E = 7.8e-15
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                       +++A++Dy ++++ ELsFkkG  +++ ++ +d+WweG++n  G  G
    KIAA0456   755    IEAIAKFDYVGRTARELSFKKGASLLLYQRASDDWWEGRHN--GIDG 799  

                   lfPsnYVeeie<-*
                   l+P+ Y+ +++   
    KIAA0456   800 LIPHQYIVVQD    810  

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