hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-03221787/chunk_1/iprscan-20080502-03221787.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0451 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00780.12.ls CNH domain 351.9 9.8e-103 1 PF00780.12.fs CNH domain 350.2 3.2e-102 1 PF08826.1.ls DMPK coiled coil domain like 120.7 3.8e-33 1 PF08826.1.fs DMPK coiled coil domain like 118.7 7.7e-33 1 PF00130.12.fs Phorbol esters/diacylglycerol binding domai 54.9 1.5e-14 1 PF00130.12.ls Phorbol esters/diacylglycerol binding domai 56.9 6.2e-14 1 PF00169.19.fs PH domain 24.9 3.9e-07 1 PF00786.18.fs P21-Rho-binding domain 24.3 3.4e-06 2 PF00169.19.ls PH domain 27.0 6.4e-05 1 PF00786.18.ls P21-Rho-binding domain 12.4 0.0063 2 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF08826.1.fs 1/1 83 143 .. 1 61 [] 118.7 7.7e-33 PF08826.1.ls 1/1 83 143 .. 1 61 [] 120.7 3.8e-33 PF00130.12.fs 1/1 202 254 .. 1 55 [] 54.9 1.5e-14 PF00130.12.ls 1/1 202 254 .. 1 55 [] 56.9 6.2e-14 PF00169.19.fs 1/1 272 390 .. 1 92 [] 24.9 3.9e-07 PF00169.19.ls 1/1 272 390 .. 1 92 [] 27.0 6.4e-05 PF00780.12.ls 1/1 417 688 .. 1 363 [] 351.9 9.8e-103 PF00780.12.fs 1/1 417 688 .. 1 363 [] 350.2 3.2e-102 Alignments of top-scoring domains: PF08826.1.fs: domain 1 of 1, from 83 to 143: score 118.7, E = 7.7e-33 *->eLQsALEaEIRAKQslqeeLekVkaanlafeskLqeaEkkNreLeae eLQsAL+aEIRAKQ++qeeL+kVka+n+++e+kL+++EkkN eL++e KIAA0451 83 ELQSALDAEIRAKQAIQEELNKVKASNIITECKLKDSEKKNLELLSE 129 leqLkkemEelRar<-* +eqL+k++EelR++ KIAA0451 130 IEQLIKDTEELRSE 143 PF08826.1.ls: domain 1 of 1, from 83 to 143: score 120.7, E = 3.8e-33 *->eLQsALEaEIRAKQslqeeLekVkaanlafeskLqeaEkkNreLeae eLQsAL+aEIRAKQ++qeeL+kVka+n+++e+kL+++EkkN eL++e KIAA0451 83 ELQSALDAEIRAKQAIQEELNKVKASNIITECKLKDSEKKNLELLSE 129 leqLkkemEelRar<-* +eqL+k++EelR++ KIAA0451 130 IEQLIKDTEELRSE 143 PF00130.12.fs: domain 1 of 1, from 202 to 254: score 54.9, E = 1.5e-14 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F ++ +f pt+C +C +++ g l++qG++C++C++ +H C++k KIAA0451 202 HQFFVK-SFTTPTKCHQCTSLMVG-LIRQGCSCEVCGFSCHITCVNK 246 VppeCgcg<-* +p+ C+ KIAA0451 247 APTTCPVP 254 PF00130.12.ls: domain 1 of 1, from 202 to 254: score 56.9, E = 6.2e-14 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F ++ +f pt+C +C +++ g l++qG++C++C++ +H C++k KIAA0451 202 HQFFVK-SFTTPTKCHQCTSLMVG-LIRQGCSCEVCGFSCHITCVNK 246 VppeCgcg<-* +p+ C+ KIAA0451 247 APTTCPVP 254 PF00169.19.fs: domain 1 of 1, from 272 to 390: score 24.9, E = 3.9e-07 *->vikeGwLlkkg...gkkswkkRyfvLfddvLlyykdkk.kkpkgsip +eG+++ ++ + kk+w++ ++++d +L++y+ +k + s+ KIAA0451 272 TAYEGHVRIPKpagVKKGWQRALAIVCDFKLFLYDIAEgKASQPSVV 318 Lsgi.qvtkvpdn...............krkncFeirt.dr......etl +s++ ++ + + ++ ++ + ++++ +++F+++ ++ + ++++ ++ KIAA0451 319 ISQViDMRDEEFSvssvlasdvihasrkDIPCIFRVTAsQLsasnnkCSI 368 llqaeseeerkeWvkaiqsair<-* l a++e e+++Wv ++++++ KIAA0451 369 LMLADTENEKNKWVGVLSELHK 390 PF00169.19.ls: domain 1 of 1, from 272 to 390: score 27.0, E = 6.4e-05 *->vikeGwLlkkg...gkkswkkRyfvLfddvLlyykdkk.kkpkgsip +eG+++ ++ + kk+w++ ++++d +L++y+ +k + s+ KIAA0451 272 TAYEGHVRIPKpagVKKGWQRALAIVCDFKLFLYDIAEgKASQPSVV 318 Lsgi.qvtkvpdn...............krkncFeirt.dr......etl +s++ ++ + + ++ ++ + ++++ +++F+++ ++ + ++++ ++ KIAA0451 319 ISQViDMRDEEFSvssvlasdvihasrkDIPCIFRVTAsQLsasnnkCSI 368 llqaeseeerkeWvkaiqsair<-* l a++e e+++Wv ++++++ KIAA0451 369 LMLADTENEKNKWVGVLSELHK 390 PF00780.12.ls: domain 1 of 1, from 417 to 688: score 351.9, E = 9.8e-103 *->kvnwihaitggqnLLvGTeeGLYvlnrsdqhdaflgklvkiigrrsv k+++++ai+++ ++++G eeGL+v +++++ +++++++++++ KIAA0451 417 KTTQAAAIIDHERIALGNEEGLFVVHVTKD------EIIRVGDNKKI 457 tqlevieelnlLllLseGKkrhLylhpLsaLetekkdtaqgsskilrlpe +q+e+i+ +l++++s G++rh++l+p+saL KIAA0451 458 HQIELIPNDQLVAVIS-GRNRHVRLFPMSAL------------------- 487 ktlarrfavskKipetkghCklccvgfiaegycggtkFLcvvAlksddls ++r ++K+ etkg C+ ++ g++++g++ + Lcv A+k+ KIAA0451 488 ---DGRETDFYKLSETKG-CQTVTSGKVRHGALTC---LCV-AMKR---- 525 tsillyeWPlkeyklpnnyekllkfinrkktrfrkpkeldvpepvqsief ++l+ye ++++ktr+rk+ke++vp++vq++++ KIAA0451 526 -QVLCYE------------------LFQSKTRHRKFKEIQVPYNVQWMAI 556 lkpslcvGcskgfeillvlfgssgfhsldleGqseaaldlllPsndlsle ++++lcvG+++gf ++ ++ e + ++l+snd++l+ KIAA0451 557 FSEQLCVGFQSGFLRYPLN--------------GEGNPYSMLHSNDHTLS 592 fakklsQsvdalrakevvsaiqidrdeyLLCfsefgvfVNlqGrrsrkkk f+ + Q++da++a+e+ ++ eyLLCf+ +g+++++qGrrsr++ KIAA0451 593 FIAH--QPMDAICAVEI------SSKEYLLCFNSIGIYTDCQGRRSRQQ- 633 diselmWegaPesfayslypyllafhdngieIrsletgeltqeladrvqt elmW+++P+s++y+ pyl ++++n+++I++++++e+ +qt KIAA0451 634 ---ELMWPANPSSCCYN-APYLSVYSENAVDIFDVNSMEW-------IQT 672 illnkirllvslrsls<-* +l+k r+l++++sl+ KIAA0451 673 LPLKKVRPLNNEGSLN 688 PF00780.12.fs: domain 1 of 1, from 417 to 688: score 350.2, E = 3.2e-102 *->kvnwihaitggqnLLvGTeeGLYvlnrsdqhdaflgklvkiigrrsv k+++++ai+++ ++++G eeGL+v +++++ +++++++++++ KIAA0451 417 KTTQAAAIIDHERIALGNEEGLFVVHVTKD------EIIRVGDNKKI 457 tqlevieelnlLllLseGKkrhLylhpLsaLetekkdtaqgsskilrlpe +q+e+i+ +l++++s G++rh++l+p+saL KIAA0451 458 HQIELIPNDQLVAVIS-GRNRHVRLFPMSAL------------------- 487 ktlarrfavskKipetkghCklccvgfiaegycggtkFLcvvAlksddls ++r ++K+ etkg C+ ++ g++++g++ + Lcv A+k+ KIAA0451 488 ---DGRETDFYKLSETKG-CQTVTSGKVRHGALTC---LCV-AMKR---- 525 tsillyeWPlkeyklpnnyekllkfinrkktrfrkpkeldvpepvqsief ++l+ye ++++ktr+rk+ke++vp++vq++++ KIAA0451 526 -QVLCYE------------------LFQSKTRHRKFKEIQVPYNVQWMAI 556 lkpslcvGcskgfeillvlfgssgfhsldleGqseaaldlllPsndlsle ++++lcvG+++gf ++ ++ e + ++l+snd++l+ KIAA0451 557 FSEQLCVGFQSGFLRYPLN--------------GEGNPYSMLHSNDHTLS 592 fakklsQsvdalrakevvsaiqidrdeyLLCfsefgvfVNlqGrrsrkkk f+ + Q++da++a+e+ ++ eyLLCf+ +g+++++qGrrsr++ KIAA0451 593 FIAH--QPMDAICAVEI------SSKEYLLCFNSIGIYTDCQGRRSRQQ- 633 diselmWegaPesfayslypyllafhdngieIrsletgeltqeladrvqt elmW+++P+s++y+ pyl ++++n+++I++++++e+ +qt KIAA0451 634 ---ELMWPANPSSCCYN-APYLSVYSENAVDIFDVNSMEW-------IQT 672 illnkirllvslrsls<-* +l+k r+l++++sl+ KIAA0451 673 LPLKKVRPLNNEGSLN 688 //