hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-03004585/chunk_1/iprscan-20080502-03004585.nocrc
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Query sequence: KIAA0438
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           30.5    2.5e-10   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           32.3    1.6e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1     652   692 ..     1    50 []    30.5  2.5e-10
PF00097.15.ls   1/1     652   692 ..     1    50 []    32.3  1.6e-06

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 652 to 692: score 30.5, E = 2.5e-10
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+IC+ e++ +    +++lpC+H      f+++C++ wl+  ++ tC
    KIAA0438   652    CPICCSEYIKDD--IATELPCHHF-----FHKPCVSIWLQ--KSGTC 689  

                   plC<-*
                   p+C   
    KIAA0438   690 PVC    692  

PF00097.15.ls: domain 1 of 1, from 652 to 692: score 32.3, E = 1.6e-06
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlsssgnttC
                      C+IC+ e++ +    +++lpC+H      f+++C++ wl+  ++ tC
    KIAA0438   652    CPICCSEYIKDD--IATELPCHHF-----FHKPCVSIWLQ--KSGTC 689  

                   plC<-*
                   p+C   
    KIAA0438   690 PVC    692  

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