hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02455103/chunk_1/iprscan-20080502-02455103.nocrc
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Query sequence: KIAA0429
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08397.1.fs IRSp53/MIM homology domain                     323.7    2.9e-99   1
PF08397.1.ls IRSp53/MIM homology domain                     264.0    2.9e-76   1
PF02205.10.fs WH2 motif                                       21.3    4.8e-05   1
PF02205.10.ls WH2 motif                                       23.1    0.00091   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF08397.1.fs   1/1       1   173 [.    50   225 .]   323.7  2.9e-99
PF08397.1.ls   1/1       1   173 [.     1   225 []   264.0  2.9e-76
PF02205.10.fs   1/1     638   655 ..     1    21 []    21.3  4.8e-05
PF02205.10.ls   1/1     638   655 ..     1    21 []    23.1  0.00091

Alignments of top-scoring domains:
PF08397.1.fs: domain 1 of 1, from 1 to 173: score 323.7, E = 2.9e-99
                   *->AtnSrgASkElGsvLtrmsevHrkinsqLeeflkaFhdeLiqpLEkk
                      Atn+rg+++E+Gs+Ltrm+++Hr+i+++L++f +a++d+Li+pL+++
    KIAA0429     1    ATNTRGGTREIGSALTRMCMRHRSIEAKLRQFSSALIDCLINPLQEQ 47   

                   tElDkKyvnatdKryqkEyKkkrdsLeKsqSdlkKlrkKsqKGkndtkye
                   +E++kK++n++dK+++kEyKk+r++++K++Sd++Kl+kK++KG++d++++
    KIAA0429    48 MEEWKKVANQLDKDHAKEYKKARQEIKKKSSDTLKLQKKAKKGRGDIQPQ 97   

                   lkeaeyledvndrqaeLeefikdgcreALlEErRRFCflVekhcpvskee
                   l++a  l+dvnd+++ Lee++k+++r+AL+EEr+RFC+++++++pv++ee
    KIAA0429    98 LDSA--LQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISMLRPVIEEE 145  

                   lafhgeakelLqnkledwqelcadpskvP<-*
                   ++++ge +++Lq++ ed+++l++dp+k+P   
    KIAA0429   146 ISMLGE-ITHLQTISEDLKSLTMDPHKLP    173  

PF08397.1.ls: domain 1 of 1, from 1 to 173: score 264.0, E = 2.9e-76
                   *->yqnImeqfnnsyPglrnlvalGknYekaLaamvlAakaYfDAlqKIg
                                                                     
    KIAA0429     -    ----------------------------------------------- -    

                   elAtnSrgASkElGsvLtrmsevHrkinsqLeeflkaFhdeLiqpLEkkt
                     Atn+rg+++E+Gs+Ltrm+++Hr+i+++L++f +a++d+Li+pL++++
    KIAA0429     1 --ATNTRGGTREIGSALTRMCMRHRSIEAKLRQFSSALIDCLINPLQEQM 48   

                   ElDkKyvnatdKryqkEyKkkrdsLeKsqSdlkKlrkKsqKGkndtkyel
                   E++kK++n++dK+++kEyKk+r++++K++Sd++Kl+kK++KG++d++++l
    KIAA0429    49 EEWKKVANQLDKDHAKEYKKARQEIKKKSSDTLKLQKKAKKGRGDIQPQL 98   

                   keaeyledvndrqaeLeefikdgcreALlEErRRFCflVekhcpvskeel
                   ++a  l+dvnd+++ Lee++k+++r+AL+EEr+RFC+++++++pv++ee+
    KIAA0429    99 DSA--LQDVNDKYLLLEETEKQAVRKALIEERGRFCTFISMLRPVIEEEI 146  

                   afhgeakelLqnkledwqelcadpskvP<-*
                   +++ge +++Lq++ ed+++l++dp+k+P   
    KIAA0429   147 SMLGE-ITHLQTISEDLKSLTMDPHKLP    173  

PF02205.10.fs: domain 1 of 1, from 638 to 655: score 21.3, E = 4.8e-05
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      ++ ++L+aIr   +G+kLKK+   
    KIAA0429   638    QGEDMLNAIR---RGVKLKKT    655  

PF02205.10.ls: domain 1 of 1, from 638 to 655: score 23.1, E = 0.00091
                   *->aRsaLLaaIrsagqGikLKKv<-*
                      ++ ++L+aIr   +G+kLKK+   
    KIAA0429   638    QGEDMLNAIR---RGVKLKKT    655  

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