hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02405534/chunk_1/iprscan-20080502-02405534.nocrc
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Query sequence: KIAA0426
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00431                                                 287.7    8.5e-82   1
SM00355                                                 284.1    1.1e-80  10

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00431      1/1      51   163 ..     1   113 []   287.7  8.5e-82
SM00355      1/10    283   305 ..     1    23 []    27.3    0.002
SM00355      2/10    311   333 ..     1    23 []    28.5  0.00092
SM00355      3/10    339   361 ..     1    23 []    32.2  7.1e-05
SM00355      4/10    367   389 ..     1    23 []    28.8  0.00075
SM00355      5/10    395   417 ..     1    23 []    27.7   0.0016
SM00355      6/10    423   445 ..     1    23 []    25.7   0.0064
SM00355      7/10    451   472 ..     1    23 []    24.8    0.012
SM00355      8/10    478   500 ..     1    23 []    30.4  0.00024
SM00355      9/10    506   528 ..     1    23 []    31.8  9.5e-05
SM00355     10/10    534   556 ..     1    23 []    26.8   0.0031

Alignments of top-scoring domains:
SM00431: domain 1 of 1, from 51 to 163: score 287.7, E = 8.5e-82
                   *->pEifRqrFRqFrYqEtsGPREALSRLRELCrqWLRPElhTKEQILEL
                      +E+fRq+FRqF+YqEtsGPREALSRLRELC+qWLRPE+hTKEQILEL
    KIAA0426    51    REVFRQYFRQFCYQETSGPREALSRLRELCHQWLRPETHTKEQILEL 97   

                   LVLEQFLTILPgELQaWVrehhPeSGEEAVtLlEdLereLdepgqqVsah
                   LVLEQFLTILP+ELQaWV+e+hPeSGEE+Vt+lEdLereLdepg+qVs+h
    KIAA0426    98 LVLEQFLTILPEELQAWVQEQHPESGEEVVTVLEDLERELDEPGEQVSVH 147  

                   vhgqevLleemvplga<-*
                   + +qe++l+e+v l++   
    KIAA0426   148 TGEQEMFLQETVRLRK    163  

SM00355: domain 1 of 10, from 283 to 305: score 27.3, E = 0.002
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C+  Cgk fs++++L++H+r+H   
    KIAA0426   283    YGCDD-CGKAFSQHsHLIEHQRIH    305  

SM00355: domain 2 of 10, from 311 to 333: score 28.5, E = 0.00092
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cgk f+ ++ L+rH  +H   
    KIAA0426   311    YKCEE-CGKAFRGRtVLIRHKIIH    333  

SM00355: domain 3 of 10, from 339 to 361: score 32.2, E = 7.1e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cgk f +++aL++H+r H   
    KIAA0426   339    YKCNE-CGKAFGRWsALNQHQRLH    361  

SM00355: domain 4 of 10, from 367 to 389: score 28.8, E = 0.00075
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C+  Cgk fs+k  L +H+++H   
    KIAA0426   367    YHCND-CGKAFSQKaGLFHHIKIH    389  

SM00355: domain 5 of 10, from 395 to 417: score 27.7, E = 0.0016
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ C+ksfs+++ L++H+ vH   
    KIAA0426   395    YQCTQ-CNKSFSRRsILTQHQGVH    417  

SM00355: domain 6 of 10, from 423 to 445: score 25.7, E = 0.0064
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f   ++L+ H+ +H   
    KIAA0426   423    YECNE-CGKAFVYNsSLVSHQEIH    445  

SM00355: domain 7 of 10, from 451 to 472: score 24.8, E = 0.012
                   *->ykCpigCgksfsskaLkrHmrvH<-*
                      y+C++ Cgksfs+  L++H+r+H   
    KIAA0426   451    YQCKE-CGKSFSQSGLIQHQRIH    472  

SM00355: domain 8 of 10, from 478 to 500: score 30.4, E = 0.00024
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ C k f ++++L++H+r+H   
    KIAA0426   478    YKCDV-CEKAFIQRtSLTEHQRIH    500  

SM00355: domain 9 of 10, from 506 to 528: score 31.8, E = 9.5e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cgk f++++ L++H+r+H   
    KIAA0426   506    YKCDK-CGKAFTQRsVLTEHQRIH    528  

SM00355: domain 10 of 10, from 534 to 556: score 26.8, E = 0.0031
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cg  f+  ++L++H+r+H   
    KIAA0426   534    YKCDE-CGNAFRGItSLIQHQRIH    556  

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