hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-02340782/chunk_1/iprscan-20080502-02340782.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0422 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00211.10.ls Adenylate and Guanylate cyclase catalyt 576.8 2e-170 2 PF00211.10.fs Adenylate and Guanylate cyclase catalyt 573.1 2.5e-169 2 PF06327.4.ls Domain of Unknown Function (DUF1053) 206.2 7.1e-59 1 PF06327.4.fs Domain of Unknown Function (DUF1053) 204.4 2.5e-58 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00211.10.ls 1/2 415 599 .. 1 223 [] 290.1 4e-84 PF00211.10.fs 1/2 415 599 .. 1 223 [] 288.2 1.4e-83 PF06327.4.fs 1/1 605 714 .. 1 127 [] 204.4 2.5e-58 PF06327.4.ls 1/1 605 714 .. 1 127 [] 206.2 7.1e-59 PF00211.10.fs 2/2 962 1156 .. 1 223 [] 284.9 1.5e-82 PF00211.10.ls 2/2 962 1156 .. 1 223 [] 286.7 4.1e-83 Alignments of top-scoring domains: PF00211.10.ls: domain 1 of 2, from 415 to 599: score 290.1, E = 4e-84 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y q +dnV+ilFaDI+GFT+l+s+++ ++e+v LN+l++rFD KIAA0422 415 IYIQKHDNVSILFADIEGFTSLASQCT----AQELVMTLNELFARFD 457 eLldehkfgvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaakl +L++e+ ++ ++K++GD+Y+++sGlp+a +a+Ha+++ KIAA0422 458 KLAAEN--HCLRIKILGDCYYCVSGLPEA-------------RADHAHCC 492 admALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGlt ++m+ dm+eai+ v++ +++ + +++R+GiH+G V +Gv+G KIAA0422 493 VEMGVDMIEAISLVREVTGV--N-------VNMRVGIHSGRVHCGVLG-- 531 akrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefef ++++++dvw+++V+lA+ mE++G +g +Ih++ +t ++L++++++e+++ KIAA0422 532 LRKWQFDVWSNDVTLANHMEAGGRAG--RIHITRATLQYLNGDYEVEPGR 579 aleprgeveVkGkgkpGeietYfLkg<-* +ge++ + k++ iet+++ g KIAA0422 580 ----GGERNAYLKEQH--IETFLILG 599 PF00211.10.fs: domain 1 of 2, from 415 to 599: score 288.2, E = 1.4e-83 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y q +dnV+ilFaDI+GFT+l+s+++ ++e+v LN+l++rFD KIAA0422 415 IYIQKHDNVSILFADIEGFTSLASQCT----AQELVMTLNELFARFD 457 eLldehkfgvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaakl +L++e+ ++ ++K++GD+Y+++sGlp+a +a+Ha+++ KIAA0422 458 KLAAEN--HCLRIKILGDCYYCVSGLPEA-------------RADHAHCC 492 admALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGlt ++m+ dm+eai+ v++ +++ + +++R+GiH+G V +Gv+G KIAA0422 493 VEMGVDMIEAISLVREVTGV--N-------VNMRVGIHSGRVHCGVLG-- 531 akrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefef ++++++dvw+++V+lA+ mE++G +g +Ih++ +t ++L++++++e+++ KIAA0422 532 LRKWQFDVWSNDVTLANHMEAGGRAG--RIHITRATLQYLNGDYEVEPGR 579 aleprgeveVkGkgkpGeietYfLkg<-* +ge++ + k++ iet+++ g KIAA0422 580 ----GGERNAYLKEQH--IETFLILG 599 PF06327.4.fs: domain 1 of 1, from 605 to 714: score 204.4, E = 2.5e-58 *->kglkaelesltdrrsnsmtrylesWgPerPFaNLnsresglkaatsi k++ka+l++l+++r+nsm++++++W+P+r+F sr++++ka++++ KIAA0422 605 KEEKAMLAKLQRTRANSMEGLMPRWVPDRAF----SRTKDSKAFRQM 647 giddkpkhrvsaqvrtnpelhskKgrdEldEiDefieqaIdirSndklCw gidd++k+++++q+++npe dE+Def+++aId+rS+d+l KIAA0422 648 GIDDSSKDNRGTQDALNPE----------DEVDEFLSRAIDARSIDQL-- 685 kRrEhlnpftLtFkdkslEkKYsqlrdprF<-* R++h+++f+LtF++++lEkKYs+++dprF KIAA0422 686 -RKDHVRRFLLTFQREDLEKKYSRKVDPRF 714 PF06327.4.ls: domain 1 of 1, from 605 to 714: score 206.2, E = 7.1e-59 *->kglkaelesltdrrsnsmtrylesWgPerPFaNLnsresglkaatsi k++ka+l++l+++r+nsm++++++W+P+r+F sr++++ka++++ KIAA0422 605 KEEKAMLAKLQRTRANSMEGLMPRWVPDRAF----SRTKDSKAFRQM 647 giddkpkhrvsaqvrtnpelhskKgrdEldEiDefieqaIdirSndklCw gidd++k+++++q+++npe dE+Def+++aId+rS+d+l KIAA0422 648 GIDDSSKDNRGTQDALNPE----------DEVDEFLSRAIDARSIDQL-- 685 kRrEhlnpftLtFkdkslEkKYsqlrdprF<-* R++h+++f+LtF++++lEkKYs+++dprF KIAA0422 686 -RKDHVRRFLLTFQREDLEKKYSRKVDPRF 714 PF00211.10.fs: domain 2 of 2, from 962 to 1156: score 284.9, E = 1.5e-82 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y+q+ ++V+++Fa+I++F +++ + + Nn+++e++rlLN+++++FD KIAA0422 962 LYYQSCECVAVMFASIANFSEFYVELEANNEGVECLRLLNEIIADFD 1008 eLldehkf.gvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaak e+++e +f+ +K+KTIG++YM+asGl + +++H+ KIAA0422 1009 EIISEERFrQLEKIKTIGSTYMAASGLNAS--------TYDQVGRSHITA 1050 ladmALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGl lad A+ ++e ++ +n++++n + +++ iG++ GpVvaGviG KIAA0422 1051 LADYAMRLMEQMKHINEHSFN--N-------FQMKIGLNMGPVVAGVIG- 1090 takrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefe a++p+Yd+wG+TVN+ SRm+StGvp +I+v++ y++L +++ ++ e KIAA0422 1091 -ARKPQYDIWGNTVNVSSRMDSTGVPD--RIQVTTDLYQVLAAKG-YQLE 1136 faleprgeveVkGkgkpGeietYfLkg<-* + rg v+VkGkg+ ++tYfL+g KIAA0422 1137 C----RGVVKVKGKGE---MTTYFLNG 1156 PF00211.10.ls: domain 2 of 2, from 962 to 1156: score 286.7, E = 4.1e-83 *->vyaqrydnVtilFaDIvGFTalssrhsvNngpeevvrlLNdlytrFD +y+q+ ++V+++Fa+I++F +++ + + Nn+++e++rlLN+++++FD KIAA0422 962 LYYQSCECVAVMFASIANFSEFYVELEANNEGVECLRLLNEIIADFD 1008 eLldehkf.gvyKvKTIGDaYMvasGlppaadqtkLakklqldsaaHaak e+++e +f+ +K+KTIG++YM+asGl + +++H+ KIAA0422 1009 EIISEERFrQLEKIKTIGSTYMAASGLNAS--------TYDQVGRSHITA 1050 ladmALdmveaiqevnvehanrepPtvLyrGlrvRiGiHtGpVvaGviGl lad A+ ++e ++ +n++++n + +++ iG++ GpVvaGviG KIAA0422 1051 LADYAMRLMEQMKHINEHSFN--N-------FQMKIGLNMGPVVAGVIG- 1090 takrprYdvwGdTVNlASRmEStGvpgsekIhvseetyrlLkeeesfefe a++p+Yd+wG+TVN+ SRm+StGvp +I+v++ y++L +++ ++ e KIAA0422 1091 -ARKPQYDIWGNTVNVSSRMDSTGVPD--RIQVTTDLYQVLAAKG-YQLE 1136 faleprgeveVkGkgkpGeietYfLkg<-* + rg v+VkGkg+ ++tYfL+g KIAA0422 1137 C----RGVVKVKGKGE---MTTYFLNG 1156 //