hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02271617/chunk_1/iprscan-20080502-02271617.nocrc
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Query sequence: KIAA0418
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00326                                                 279.2    3.2e-79   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00326    1/5      53   108 ..     1    58 []    69.1  5.4e-16
SM00326    2/5     125   180 ..     1    58 []    68.1  1.1e-15
SM00326    3/5     307   362 ..     1    58 []    48.7  7.6e-10
SM00326    4/5     699   754 ..     1    58 []    47.8  1.4e-09
SM00326    5/5     931   989 .]     1    58 []    45.5  7.2e-09

Alignments of top-scoring domains:
SM00326: domain 1 of 5, from 53 to 108: score 69.1, E = 5.4e-16
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      e++v++ +y+ q+  ELs+++G+++ v+ek+++gWw +      ++G
    KIAA0418    53    EQYVVVSNYKKQENSELSLQAGEVVDVIEKNESGWWFVSTS--EEQG 97   

                   lfPsnYVeeie<-*
                   ++P++Y+e ++   
    KIAA0418    98 WVPATYLEAQN    108  

SM00326: domain 2 of 5, from 125 to 180: score 68.1, E = 1.1e-15
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      e++v + +y++q+ dE+ F+kG +++v++k+ +gWw+ +    GkeG
    KIAA0418   125    EKYVTVQPYTSQSKDEIGFEKGVTVEVIRKNLEGWWYIRYL--GKEG 169  

                   lfPsnYVeeie<-*
                   + P++Y+++ +   
    KIAA0418   170 WAPASYLKKAK    180  

SM00326: domain 3 of 5, from 307 to 362: score 48.7, E = 7.6e-10
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      +++  +  ++++ +d +sF+ G++ +v++k+++gWw+++++   keG
    KIAA0418   307    VEYYTIAEFQSCISDGISFRGGQKAEVIDKNSGGWWYVQIG--EKEG 351  

                   lfPsnYVeeie<-*
                   + P++Y+ + +   
    KIAA0418   352 WAPASYIDKRK    362  

SM00326: domain 4 of 5, from 699 to 754: score 47.8, E = 1.4e-09
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                        +    +y+  ++ E+sF +G  ++vlek ++gWw+++ +    eG
    KIAA0418   699    TSYMTCSAYQKVQDSEISFPAGVEVQVLEKQESGWWYVRFG--ELEG 743  

                   lfPsnYVeeie<-*
                   + Ps Y+ + e   
    KIAA0418   744 WAPSHYLVLDE    754  

SM00326: domain 5 of 5, from 931 to 989: score 45.5, E = 7.2e-09
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnr..tGk
                       ++v + Dye+ +e+   F++G  ++vle++ +gWw++++ ++ +  
    KIAA0418   931    DVYVSIADYEG-DEETAGFQEGVSMEVLERNPNGWWYCQILDgvKPF 976  

                   eGlfPsnYVeeie<-*
                   +G++PsnY+e+++   
    KIAA0418   977 KGWVPSNYLEKKN    989  

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