hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02235290/chunk_1/iprscan-20080502-02235290.nocrc
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Query sequence: KIAA0416
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00369                                                 168.6    6.3e-46   9

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00369      1/9      97   120 ..     1    24 []    25.8    0.006
SM00369      2/9     121   144 ..     1    24 []    23.0    0.041
SM00369      3/9     145   168 ..     1    24 []    30.8  0.00019
SM00369      4/9     169   192 ..     1    24 []    29.4  0.00048
SM00369      5/9     193   216 ..     1    24 []    18.0      1.3
SM00369      6/9     217   237 ..     1    24 []    14.5      7.1
SM00369      7/9     241   264 ..     1    24 []     8.2       41
SM00369      8/9     265   288 ..     1    24 []     1.9  2.4e+02
SM00369      9/9     289   312 ..     1    24 []    16.9      2.8

Alignments of top-scoring domains:
SM00369: domain 1 of 9, from 97 to 120: score 25.8, E = 0.006
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       ++L+ L+L++Nq++++ ++aFqg   
    KIAA0416    97    FSQLTWLHLDHNQISTVKEDAFQG    120  

SM00369: domain 2 of 9, from 121 to 144: score 23.0, E = 0.041
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L +L+eL Ls+N++  LP+ +F     
    KIAA0416   121    LYKLKELILSSNKIFYLPNTTFTQ    144  

SM00369: domain 3 of 9, from 145 to 168: score 30.8, E = 0.00019
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L nL+ LdLs+NqL+sL+p++F g   
    KIAA0416   145    LINLQNLDLSFNQLSSLHPELFYG    168  

SM00369: domain 4 of 9, from 169 to 192: score 29.4, E = 0.00048
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L++L++L+L +N L+++P ++F++   
    KIAA0416   169    LRKLQTLHLRSNSLRTIPVRLFWD    192  

SM00369: domain 5 of 9, from 193 to 216: score 18.0, E = 1.3
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       ++L+ LdLs N+L+sL ++ F+g   
    KIAA0416   193    CRSLEFLDLSTNRLRSLARNGFAG    216  

SM00369: domain 6 of 9, from 217 to 237: score 14.5, E = 7.1
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L +LreL+L++NqLt +    F++   
    KIAA0416   217    LIKLRELHLEHNQLTKIN---FAH    237  

SM00369: domain 7 of 9, from 241 to 264: score 8.2, E = 41
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L++L +L L++N+++ L  g+ +    
    KIAA0416   241    LSSLHTLFLQWNKISNLTCGMEWT    264  

SM00369: domain 8 of 9, from 265 to 288: score 1.9, E = 2.4e+02
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                       + L++LdL +N ++++   +F+    
    KIAA0416   265    WGTLEKLDLTGNEIKAIDLTVFET    288  

SM00369: domain 9 of 9, from 289 to 312: score 16.9, E = 2.8
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      +pnL+ L  +nN+L sL + ++++   
    KIAA0416   289    MPNLKILLMDNNKLNSLDSKILNS    312  

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