# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01877.fasta.nr -Q ../query/KIAA0410.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0410, 505 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7820035 sequences Expectation_n fit: rho(ln(x))= 6.8014+/-0.000196; mu= 4.7173+/- 0.011 mean_var=119.6560+/-23.424, 0's: 32 Z-trim: 68 B-trim: 43 in 2/64 Lambda= 0.117248 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|57162674|emb|CAI39901.1| nucleoporin like 1 [Ho ( 485) 3032 523.7 4.3e-146 gi|119628775|gb|EAX08370.1| nucleoporin like 1, is ( 485) 3021 521.8 1.6e-145 gi|56788379|ref|NP_001008565.1| nucleoporin like 1 ( 516) 2996 517.6 3.1e-144 gi|44888845|sp|Q9BVL2.1|NUPL1_HUMAN RecName: Full= ( 599) 2996 517.7 3.5e-144 gi|119628773|gb|EAX08368.1| nucleoporin like 1, is ( 570) 2985 515.8 1.2e-143 gi|119628774|gb|EAX08369.1| nucleoporin like 1, is ( 599) 2985 515.8 1.3e-143 gi|114649053|ref|XP_001155335.1| PREDICTED: simila ( 516) 2975 514.1 3.6e-143 gi|114649051|ref|XP_001155405.1| PREDICTED: simila ( 562) 2975 514.1 3.9e-143 gi|55639597|ref|XP_509592.1| PREDICTED: hypothetic ( 570) 2975 514.1 3.9e-143 gi|114649045|ref|XP_001155775.1| PREDICTED: simila ( 599) 2975 514.1 4.1e-143 gi|67969052|dbj|BAE00881.1| unnamed protein produc ( 570) 2967 512.7 1e-142 gi|67967731|dbj|BAE00348.1| unnamed protein produc ( 570) 2967 512.7 1e-142 gi|194221787|ref|XP_001490543.2| PREDICTED: simila ( 511) 2874 497.0 5e-138 gi|73993405|ref|XP_860034.1| PREDICTED: similar to ( 485) 2870 496.3 7.6e-138 gi|114649047|ref|XP_001155659.1| PREDICTED: simila ( 576) 2834 490.3 6e-136 gi|73993407|ref|XP_534528.2| PREDICTED: similar to ( 599) 2834 490.3 6.2e-136 gi|193784832|dbj|BAG53985.1| unnamed protein produ ( 576) 2823 488.4 2.2e-135 gi|149598952|ref|XP_001516735.1| PREDICTED: hypoth ( 598) 2623 454.6 3.4e-125 gi|126327385|ref|XP_001366702.1| PREDICTED: simila ( 600) 2613 452.9 1.1e-124 gi|53130806|emb|CAG31732.1| hypothetical protein [ ( 601) 2587 448.5 2.3e-123 gi|114649049|ref|XP_001155721.1| PREDICTED: simila ( 587) 2474 429.4 1.3e-117 gi|194381070|dbj|BAG64103.1| unnamed protein produ ( 587) 2466 428.0 3.3e-117 gi|56788377|ref|NP_001008564.1| nucleoporin like 1 ( 587) 2465 427.8 3.7e-117 gi|194382584|dbj|BAG64462.1| unnamed protein produ ( 440) 2463 427.4 3.8e-117 gi|57162675|emb|CAI39902.1| nucleoporin like 1 [Ho ( 463) 2437 423.0 8.2e-116 gi|26325620|dbj|BAC26564.1| unnamed protein produc ( 532) 2337 406.2 1.1e-110 gi|148704173|gb|EDL36120.1| nucleoporin like 1, is ( 558) 2334 405.7 1.7e-110 gi|74227471|dbj|BAE21799.1| unnamed protein produc ( 581) 2334 405.7 1.7e-110 gi|44888844|sp|Q8R332.1|NUPL1_MOUSE RecName: Full= ( 587) 2334 405.7 1.7e-110 gi|148704172|gb|EDL36119.1| nucleoporin like 1, is ( 603) 2334 405.7 1.8e-110 gi|146186783|gb|AAI40494.1| NUPL1 protein [Bos tau ( 586) 2332 405.3 2.2e-110 gi|26347103|dbj|BAC37200.1| unnamed protein produc ( 558) 2330 405.0 2.7e-110 gi|26352053|dbj|BAC39663.1| unnamed protein produc ( 537) 2329 404.8 2.9e-110 gi|149598954|ref|XP_001516744.1| PREDICTED: hypoth ( 586) 2302 400.3 7.4e-109 gi|149030201|gb|EDL85257.1| nucleoporin like 1, is ( 468) 2283 397.0 5.8e-108 gi|149030198|gb|EDL85254.1| nucleoporin like 1, is ( 556) 2283 397.0 6.6e-108 gi|149030197|gb|EDL85253.1| nucleoporin like 1, is ( 583) 2283 397.1 6.9e-108 gi|48429022|sp|P70581.1|NUPL1_RAT RecName: Full=Nu ( 585) 2283 397.1 6.9e-108 gi|126327387|ref|XP_001366757.1| PREDICTED: simila ( 588) 2213 385.2 2.5e-104 gi|27371279|gb|AAH41268.1| Nupl1-prov protein [Xen ( 560) 2104 366.8 8.7e-99 gi|133777336|gb|AAI12951.1| Nupl1 protein [Xenopus ( 593) 2102 366.4 1.1e-98 gi|46250240|gb|AAH68367.1| Nucleoporin like 1 [Dan ( 567) 1887 330.1 9.8e-88 gi|58701923|gb|AAH90209.1| MGC84997 protein [Xenop ( 599) 1754 307.6 6.1e-81 gi|60552302|gb|AAH91643.1| Nupl1 protein [Xenopus ( 527) 1734 304.2 5.7e-80 gi|89268939|emb|CAJ81930.1| nucleoporin like 1 [Xe ( 618) 1670 293.4 1.2e-76 gi|68534035|gb|AAH98882.1| Nupl1 protein [Danio re ( 437) 1582 278.4 2.7e-72 gi|3941277|gb|AAC82318.1| p45 [Rattus norvegicus] ( 513) 1503 265.1 3.2e-68 gi|119628776|gb|EAX08371.1| nucleoporin like 1, is ( 325) 1299 230.4 5.5e-58 gi|47210743|emb|CAF94428.1| unnamed protein produc ( 479) 1202 214.1 6.5e-53 gi|3941279|gb|AAC82319.1| p23 [Rattus norvegicus] ( 208) 1185 211.0 2.5e-52 >>gi|57162674|emb|CAI39901.1| nucleoporin like 1 [Homo s (485 aa) initn: 3032 init1: 3032 opt: 3032 Z-score: 2779.0 bits: 523.7 E(): 4.3e-146 Smith-Waterman score: 3032; 100.000% identity (100.000% similar) in 485 aa overlap (21-505:1-485) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV :::::::::::::::::::::::::::::::::::::::: gi|571 MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|571 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::::::::: gi|571 AAAVAMAATLTQQQQPATGLNAFKL 470 480 >>gi|119628775|gb|EAX08370.1| nucleoporin like 1, isofor (485 aa) initn: 3021 init1: 3021 opt: 3021 Z-score: 2769.0 bits: 521.8 E(): 1.6e-145 Smith-Waterman score: 3021; 99.588% identity (99.794% similar) in 485 aa overlap (21-505:1-485) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV :::::::::::::::::::::::::::::::::.:::::: gi|119 MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGTSSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TTTTAPTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::::::::: gi|119 AAAVAMAATLTQQQQPATGLNAFKL 470 480 >>gi|56788379|ref|NP_001008565.1| nucleoporin like 1 iso (516 aa) initn: 2996 init1: 2996 opt: 2996 Z-score: 2745.7 bits: 517.6 E(): 3.1e-144 Smith-Waterman score: 2996; 100.000% identity (100.000% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV :::::::::::::::::::::::::::::::::::::::: gi|567 MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|567 AAAVAMAATLTQQQQPATGDKWCNVAELKNRTQLSLFVNKLELSCYCVIDLLYNEQ 470 480 490 500 510 >>gi|44888845|sp|Q9BVL2.1|NUPL1_HUMAN RecName: Full=Nucl (599 aa) initn: 2996 init1: 2996 opt: 2996 Z-score: 2744.8 bits: 517.7 E(): 3.5e-144 Smith-Waterman score: 2996; 100.000% identity (100.000% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV :::::::::::::::::::::::::::::::::::::::: gi|448 MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|448 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|448 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|448 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|448 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|448 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|448 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|448 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|448 AAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFG 470 480 490 500 510 520 >>gi|119628773|gb|EAX08368.1| nucleoporin like 1, isofor (570 aa) initn: 2985 init1: 2985 opt: 2985 Z-score: 2735.1 bits: 515.8 E(): 1.2e-143 Smith-Waterman score: 2985; 99.582% identity (99.791% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV :::::::::::::::::::::::::::::::::.:::::: gi|119 MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGTSSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TTTTAPTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|119 AAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFG 470 480 490 500 510 520 >>gi|119628774|gb|EAX08369.1| nucleoporin like 1, isofor (599 aa) initn: 2985 init1: 2985 opt: 2985 Z-score: 2734.8 bits: 515.8 E(): 1.3e-143 Smith-Waterman score: 2985; 99.582% identity (99.791% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV :::::::::::::::::::::::::::::::::.:::::: gi|119 MSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGTSSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TTTTAPTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|119 AAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFG 470 480 490 500 510 520 >>gi|114649053|ref|XP_001155335.1| PREDICTED: similar to (516 aa) initn: 2975 init1: 2975 opt: 2975 Z-score: 2726.5 bits: 514.1 E(): 3.6e-143 Smith-Waterman score: 2975; 99.582% identity (99.582% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV ::: :::::::::::::::::::::: ::::::::::::: gi|114 MSTVFSFGSGTLGSTTVAAGGTSTGGGFSFGTGASSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|114 AAAVAMAATLTQQQQPATGDKWCNVAELKNRTQLSLFVNKLELSCYCVIDLLYNEQ 470 480 490 500 510 >>gi|114649051|ref|XP_001155405.1| PREDICTED: similar to (562 aa) initn: 2975 init1: 2975 opt: 2975 Z-score: 2726.0 bits: 514.1 E(): 3.9e-143 Smith-Waterman score: 2975; 99.582% identity (99.582% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV ::: :::::::::::::::::::::: ::::::::::::: gi|114 MSTVFSFGSGTLGSTTVAAGGTSTGGGFSFGTGASSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|114 AAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFG 470 480 490 500 510 520 >>gi|55639597|ref|XP_509592.1| PREDICTED: hypothetical p (570 aa) initn: 2975 init1: 2975 opt: 2975 Z-score: 2725.9 bits: 514.1 E(): 3.9e-143 Smith-Waterman score: 2975; 99.582% identity (99.582% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV ::: :::::::::::::::::::::: ::::::::::::: gi|556 MSTVFSFGSGTLGSTTVAAGGTSTGGGFSFGTGASSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|556 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|556 AAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFG 470 480 490 500 510 520 >>gi|114649045|ref|XP_001155775.1| PREDICTED: similar to (599 aa) initn: 2975 init1: 2975 opt: 2975 Z-score: 2725.6 bits: 514.1 E(): 4.1e-143 Smith-Waterman score: 2975; 99.582% identity (99.582% similar) in 479 aa overlap (21-499:1-479) 10 20 30 40 50 60 KIAA04 GERSVPDPFRLADGVEPWPDMSTGFSFGSGTLGSTTVAAGGTSTGGVFSFGTGASSNPSV ::: :::::::::::::::::::::: ::::::::::::: gi|114 MSTVFSFGSGTLGSTTVAAGGTSTGGGFSFGTGASSNPSV 10 20 30 40 70 80 90 100 110 120 KIAA04 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GLNFGNLGSTSTPATTSAPSSGFGTGLFGSKPATGFTLGGTNTGIATTITTGLTLGTPAT 50 60 70 80 90 100 130 140 150 160 170 180 KIAA04 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSAATTGFSLGFNKPAASATPFALPITSTSASGLTLSSALTSTPAASTGFTLNNLGGTTA 110 120 130 140 150 160 190 200 210 220 230 240 KIAA04 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TTTTASTGLSLGGALAGLGGSLFQSTNTGTSGLGQNALGLTLGTTAATSTAGNEGLGGID 170 180 190 200 210 220 250 260 270 280 290 300 KIAA04 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FSSSSDKKSDKTGTRPEDSKALKDENLPPVICQDVENLQKFVKEQKQVQEEISRMSSKAM 230 240 250 260 270 280 310 320 330 340 350 360 KIAA04 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKVQEDIKALKQLLSLAANGIQRNTLNIDKLKIETAQELKNAEIALRTQKTPPGLQHEYA 290 300 310 320 330 340 370 380 390 400 410 420 KIAA04 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 APADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA 350 360 370 380 390 400 430 440 450 460 470 480 KIAA04 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFETRRAEAKKWQNTPRVTTGPTPFSTMPN 410 420 430 440 450 460 490 500 KIAA04 AAAVAMAATLTQQQQPATGLNAFKL ::::::::::::::::::: gi|114 AAAVAMAATLTQQQQPATGPQPSLGVSFGTPFGSGIGTGLQSSGLGSSNLGGFGTSSGFG 470 480 490 500 510 520 505 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 19:09:42 2009 done: Wed Mar 4 19:13:40 2009 Total Scan time: 1476.850 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]