hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-02015158/chunk_1/iprscan-20080502-02015158.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0403
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  81.8    8.4e-20   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1      21   121 ..     1    82 []    81.8  8.4e-20

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 21 to 121: score 81.8, E = 8.4e-20
                   *->vikeGwLlkks......k.swkkryfvLfngvLlyyksk...kpkgs
                        ++GwL+kk+ +++  +++wkk +++L++++L++y +   +k  g+
    KIAA0403    21    ADCQGWLYKKKekgsflSnKWKKFWVILKGSSLYWYSNQmaeKADGF 67   

                   ipLsgcsvre.p......cFeivt.dr.tlllqAeseeereeWvealqsa
                   ++L + +v++  + +++++F+i++++ +t++++Ae+ +e++ W++ l sa
    KIAA0403    68 VNLPDFTVERaSeckkkhAFKISHpQIkTFYFAAENVQEMNVWLNKLGSA 117  

                   iaka<-*
                   + ++   
    KIAA0403   118 VIHQ    121  

//