# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hj00118.fasta.nr -Q ../query/KIAA0391.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0391, 571 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826929 sequences Expectation_n fit: rho(ln(x))= 4.8694+/-0.000183; mu= 13.4403+/- 0.010 mean_var=69.5311+/-13.506, 0's: 35 Z-trim: 39 B-trim: 0 in 0/67 Lambda= 0.153810 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|194384400|dbj|BAG64973.1| unnamed protein produ ( 567) 3833 859.9 0 gi|109083318|ref|XP_001084913.1| PREDICTED: hypoth ( 514) 3148 707.8 1.9e-201 gi|109083316|ref|XP_001084800.1| PREDICTED: simila ( 473) 1987 450.2 6.5e-124 gi|75075257|sp|Q4R366.1|MRRP3_MACFA RecName: Full= ( 473) 1982 449.0 1.4e-123 gi|194377976|dbj|BAG63351.1| unnamed protein produ ( 488) 1667 379.2 1.6e-102 gi|151555748|gb|AAI49195.1| LOC532995 protein [Bos ( 395) 1657 376.9 6.3e-102 gi|148704784|gb|EDL36731.1| mCG22352, isoform CRA_ ( 342) 1567 356.8 5.8e-96 gi|109083314|ref|XP_001085149.1| PREDICTED: simila ( 581) 1508 343.9 7.6e-92 gi|194382740|dbj|BAG64540.1| unnamed protein produ ( 211) 1442 328.9 9.1e-88 gi|148704783|gb|EDL36730.1| mCG22352, isoform CRA_ ( 271) 1394 318.4 1.8e-84 gi|12834350|dbj|BAB22879.1| unnamed protein produc ( 317) 1394 318.4 2e-84 gi|81900785|sp|Q8JZY4.1|MRRP3_MOUSE RecName: Full= ( 584) 1394 318.6 3.1e-84 gi|26327069|dbj|BAC27278.1| unnamed protein produc ( 584) 1390 317.8 5.8e-84 gi|57090505|ref|XP_547772.1| PREDICTED: similar to ( 581) 1381 315.8 2.3e-83 gi|221272061|sp|B5DF07.1|MRRP3_RAT RecName: Full=M ( 587) 1374 314.2 6.8e-83 gi|149410405|ref|XP_001512026.1| PREDICTED: simila ( 585) 1210 277.8 6.1e-72 gi|125841408|ref|XP_683289.2| PREDICTED: similar t ( 465) 1048 241.8 3.4e-61 gi|50748428|ref|XP_421241.1| PREDICTED: similar to ( 542) 938 217.4 8.5e-54 gi|210129624|gb|EEA77298.1| hypothetical protein B ( 523) 928 215.2 3.9e-53 gi|12843137|dbj|BAB25874.1| unnamed protein produc ( 140) 808 188.1 1.5e-45 gi|210090686|gb|EEA38956.1| hypothetical protein B ( 459) 715 167.9 5.9e-39 gi|194160357|gb|EDW75258.1| GK20077 [Drosophila wi ( 528) 649 153.3 1.7e-34 gi|193606109|ref|XP_001949258.1| PREDICTED: simila ( 531) 615 145.7 3.2e-32 gi|47209081|emb|CAF91538.1| unnamed protein produc ( 502) 609 144.4 7.6e-32 gi|193908200|gb|EDW07067.1| GI15064 [Drosophila mo ( 537) 600 142.4 3.2e-31 gi|194147310|gb|EDW63025.1| GJ14858 [Drosophila vi ( 541) 584 138.9 3.8e-30 gi|194103962|gb|EDW26005.1| GL14442 [Drosophila pe ( 530) 581 138.2 5.9e-30 gi|198149353|gb|EAL31524.2| GA14011 [Drosophila ps ( 530) 579 137.8 8e-30 gi|156540938|ref|XP_001603527.1| PREDICTED: simila ( 533) 575 136.9 1.5e-29 gi|190618809|gb|EDV34333.1| GF21257 [Drosophila an ( 544) 564 134.4 8.2e-29 gi|167876388|gb|EDS39771.1| conserved hypothetical ( 519) 560 133.5 1.5e-28 gi|17946134|gb|AAL49108.1| RE55427p [Drosophila me ( 364) 549 131.0 6.1e-28 gi|7290700|gb|AAF46147.1| CG15896 [Drosophila mela ( 544) 550 131.3 7.1e-28 gi|54650516|gb|AAV36837.1| SD17694p [Drosophila me ( 544) 548 130.9 9.6e-28 gi|190650082|gb|EDV47360.1| GG19582 [Drosophila er ( 545) 544 130.0 1.8e-27 gi|108880556|gb|EAT44781.1| conserved hypothetical ( 515) 543 129.8 2e-27 gi|194130913|gb|EDW52956.1| GM12478 [Drosophila se ( 544) 543 129.8 2.1e-27 gi|91080915|ref|XP_973846.1| PREDICTED: similar to ( 473) 542 129.5 2.2e-27 gi|193893366|gb|EDV92232.1| GH24799 [Drosophila gr ( 537) 539 128.9 3.8e-27 gi|157012444|gb|EAA01143.4| AGAP001968-PA [Anophel ( 518) 534 127.8 8e-27 gi|115754771|ref|XP_784164.2| PREDICTED: similar t ( 417) 485 116.8 1.3e-23 gi|215504586|gb|EEC14080.1| conserved hypothetical ( 306) 464 112.0 2.6e-22 gi|157348844|emb|CAO23845.1| unnamed protein produ ( 339) 333 83.0 1.6e-13 gi|157352365|emb|CAO43428.1| unnamed protein produ ( 459) 325 81.3 6.7e-13 gi|218190470|gb|EEC72897.1| hypothetical protein O ( 719) 303 76.6 2.8e-11 gi|47848046|dbj|BAD21831.1| putative pentatricopep ( 719) 303 76.6 2.8e-11 gi|222836038|gb|EEE74459.1| predicted protein [Pop ( 486) 280 71.4 7.1e-10 gi|222848225|gb|EEE85772.1| predicted protein [Pop ( 516) 273 69.8 2.2e-09 gi|195612160|gb|ACG27910.1| antiporter/ drug trans ( 553) 268 68.8 4.9e-09 gi|20259520|gb|AAM13880.1| unknown protein [Arabid ( 572) 261 67.2 1.5e-08 >>gi|194384400|dbj|BAG64973.1| unnamed protein product [ (567 aa) initn: 3833 init1: 3833 opt: 3833 Z-score: 4593.6 bits: 859.9 E(): 0 Smith-Waterman score: 3833; 99.824% identity (100.000% similar) in 567 aa overlap (5-571:1-567) 10 20 30 40 50 60 KIAA03 SHCIMTFYLFGIRSFPKLWKSPYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MTFYLFGIRSFPKLWKSPYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNT 10 20 30 40 50 70 80 90 100 110 120 KIAA03 KATNLIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KATNLIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPT 60 70 80 90 100 110 130 140 150 160 170 180 KIAA03 QPLNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QPLNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYD 120 130 140 150 160 170 190 200 210 220 230 240 KIAA03 LLVKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LLVKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA03 KKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDN 240 250 260 270 280 290 310 320 330 340 350 360 KIAA03 YSNKLLDILSYLRNNQLYPGESFAHSIKTWFESGQCSGCGKTIESIQLSPEEYECLKGKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YSNKLLDILSYLRNNQLYPGESFAHSIKTWFESGQCSGCGKTIESIQLSPEEYECLKGKI 300 310 320 330 340 350 370 380 390 400 410 420 KIAA03 MRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQ 360 370 380 390 400 410 430 440 450 460 470 480 KIAA03 LAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNH ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LAKRSLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNH 420 430 440 450 460 470 490 500 510 520 530 540 KIAA03 CRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSYDTVVQTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSYDTVVQTT 480 490 500 510 520 530 550 560 570 KIAA03 GDSWHIPYDEDLVERCSCEVPTKWLCLHQKT ::::::::::::::::::::::::::::::: gi|194 GDSWHIPYDEDLVERCSCEVPTKWLCLHQKT 540 550 560 >>gi|109083318|ref|XP_001084913.1| PREDICTED: hypothetic (514 aa) initn: 2700 init1: 2700 opt: 3148 Z-score: 3772.7 bits: 707.8 E(): 1.9e-201 Smith-Waterman score: 3148; 90.329% identity (95.745% similar) in 517 aa overlap (55-571:1-514) 30 40 50 60 70 80 KIAA03 GLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQNTKATNLIAKARYLRKDEGSNKQVYS ::::::::::::::::::::.::::::: : gi|109 MSPQNTKATNLIAKARYLRKEEGSNKQVSS 10 20 30 90 100 110 120 130 140 KIAA03 VPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQPLNSEEWDKLKEDLKENTGKTSF ::::: :::::.::::: :..:::: ::::::::::::::::::::: :.: ::::: gi|109 VPHFFSAGAAKKRSQMNPQSKDHALPSVRNTIQLPTQPLNSEEWDKLKADFK---GKTSF 40 50 60 70 80 150 160 170 180 190 200 KIAA03 ESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVKYLYLCVFHMQTSEVIDVFEI : .:::::: :::.::::::::::::::::::::::::.:::::::::::::::::::: gi|109 ERFIISQMAHSHSSVDVAKSLLAWVAAKNNGIVSYDLLVRYLYLCVFHMQTSEVIDVFEI 90 100 110 120 130 140 210 220 230 240 250 260 KIAA03 MKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVITPSKKNYNDCIQGALLHQDV ::.::::::: ::::::.::::::::::.::::::::::::::::::::::::::::::. gi|109 MKTRYKTLEPGGYSLLIQGLIHSDRWRESLLLLEDIKKVITPSKKNYNDCIQGALLHQDI 150 160 170 180 190 200 270 280 290 300 310 320 KIAA03 NTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNKLLDILSYLRNNQLYPGESFA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|109 NTAWNLYQELLGHDFVPMLETLKAFFDFGKDIKDDNYSNKLLDILSYLRNNQLYPGESFA 210 220 230 240 250 260 330 340 350 360 370 380 KIAA03 HSIKTWFESGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFEN :::::::::::: ::::::::::::::::: :::.::::::::::::.:::::::::::: gi|109 HSIKTWFESGQCLGCGKTIESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKRFEN 270 280 290 300 310 320 390 400 410 420 430 440 KIAA03 FIKSRPPFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWS :.:: ::::.:::::::::::::.::::.::::::::::.::::::::::::::.: :: gi|109 FVKSCPPFDIVIDGLNVAKMFPKARESQVLLNVVSQLAKQNLRLLVLGRKHMLRQSFQWR 330 340 350 360 370 380 450 460 470 480 490 500 KIAA03 RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRL .::: ::::::::::::.::.::::::::::::::::::::.:::::::::::::::::: gi|109 KDEMAEVQKQASCFFADNISKDDPFLLYATLHSGNHCRFITKDLMRDHKACLPDAKTQRL 390 400 410 420 430 440 510 520 530 540 550 560 KIAA03 FFKWQQGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKW ::::::::::::.: :::::::::.::::::::::::::::::::::.::: : :::::: gi|109 FFKWQQGHQLAIINGFPGSKLTFQHILSYDTVVQTTGDSWHIPYDEDVVERYSYEVPTKW 450 460 470 480 490 500 570 KIAA03 LCLHQKT ::::::: gi|109 LCLHQKT 510 >>gi|109083316|ref|XP_001084800.1| PREDICTED: similar to (473 aa) initn: 2100 init1: 1214 opt: 1987 Z-score: 2380.8 bits: 450.2 E(): 6.5e-124 Smith-Waterman score: 2710; 86.765% identity (92.227% similar) in 476 aa overlap (5-463:1-473) 10 20 30 40 50 KIAA03 SHCIMTFYLFGIRSFPKLWKS-PYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQN ::::::::::::::::: ::::::::::::::::.: ::::.:::::::::::::: gi|109 MTFYLFGIRSFPKLWKSNPYLGLGPGHSYVSLFLSDSCGIRSQQRLFSLKTMSPQN 10 20 30 40 50 60 70 80 90 100 110 KIAA03 TKATNLIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLP :::::::::::::::.::::::: :::::: :::::.::::: :..:::: :::::::: gi|109 TKATNLIAKARYLRKEEGSNKQVSSVPHFFSAGAAKKRSQMNPQSKDHALPSVRNTIQLP 60 70 80 90 100 110 120 130 140 150 160 170 KIAA03 TQPLNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSY ::::::::::::: :.: :::::: .:::::: :::.:::::::::::::::::::: gi|109 TQPLNSEEWDKLKADFK---GKTSFERFIISQMAHSHSSVDVAKSLLAWVAAKNNGIVSY 120 130 140 150 160 170 180 190 200 210 220 230 KIAA03 DLLVKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLED ::::.::::::::::::::::::::::.::::::: ::::::.::::::::::.:::::: gi|109 DLLVRYLYLCVFHMQTSEVIDVFEIMKTRYKTLEPGGYSLLIQGLIHSDRWRESLLLLED 180 190 200 210 220 230 240 250 260 270 280 290 KIAA03 IKKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDD ::::::::::::::::::::::::.::::::::::::::.:::::::::::::::::::: gi|109 IKKVITPSKKNYNDCIQGALLHQDINTAWNLYQELLGHDFVPMLETLKAFFDFGKDIKDD 240 250 260 270 280 290 300 310 320 330 340 KIAA03 NYSNKLLDILSYLRNNQLYPGESFAHSIKTWFES----------------GQCSGCGKTI :::::::::::::::::::::::::::::::::: ::: :::::: gi|109 NYSNKLLDILSYLRNNQLYPGESFAHSIKTWFESVPGKQWKGQFTTVQKSGQCLGCGKTI 300 310 320 330 340 350 350 360 370 380 390 400 KIAA03 ESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAK ::::::::::: :::.::::::::::::.:::::::::::::.:: ::::.::::::::: gi|109 ESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKRFENFVKSCPPFDIVIDGLNVAK 360 370 380 390 400 410 410 420 430 440 450 460 KIAA03 MFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDI ::::.::::.::::::::::.::::::::::::::.: :: .::: ::::::::::::.. gi|109 MFPKARESQVLLNVVSQLAKQNLRLLVLGRKHMLRQSFQWRKDEMAEVQKQASCFFADNM 420 430 440 450 460 470 470 480 490 500 510 520 KIAA03 SEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGS >>gi|75075257|sp|Q4R366.1|MRRP3_MACFA RecName: Full=Mito (473 aa) initn: 2090 init1: 1209 opt: 1982 Z-score: 2374.8 bits: 449.0 E(): 1.4e-123 Smith-Waterman score: 2700; 86.765% identity (91.807% similar) in 476 aa overlap (5-463:1-473) 10 20 30 40 50 KIAA03 SHCIMTFYLFGIRSFPKLWKS-PYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQN ::::::::::::::::: ::::::::::::::::.: ::::.:::::::::::::: gi|750 MTFYLFGIRSFPKLWKSNPYLGLGPGHSYVSLFLSDSCGIRSQQRLFSLKTMSPQN 10 20 30 40 50 60 70 80 90 100 110 KIAA03 TKATNLIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLP :::::::::::::::.::::::: :::::: :::::.::::: :..:::: :::::::: gi|750 TKATNLIAKARYLRKEEGSNKQVSSVPHFFSAGAAKKRSQMNPQSKDHALPSVRNTIQLP 60 70 80 90 100 110 120 130 140 150 160 170 KIAA03 TQPLNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSY ::::::::::::: :.: :::::: .:::::: :::.:::::::::::::::::::: gi|750 TQPLNSEEWDKLKADFK---GKTSFERFIISQMAHSHSSVDVAKSLLAWVAAKNNGIVSY 120 130 140 150 160 170 180 190 200 210 220 230 KIAA03 DLLVKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLED :::: ::::::::::::::::::::::.::::::: ::::::.::::::::::.:::::: gi|750 DLLVGYLYLCVFHMQTSEVIDVFEIMKTRYKTLEPGGYSLLIQGLIHSDRWRESLLLLED 180 190 200 210 220 230 240 250 260 270 280 290 KIAA03 IKKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDD ::::::::::::::::::::::::.::::::::::::::.:::::::::::::::::::: gi|750 IKKVITPSKKNYNDCIQGALLHQDINTAWNLYQELLGHDFVPMLETLKAFFDFGKDIKDD 240 250 260 270 280 290 300 310 320 330 340 KIAA03 NYSNKLLDILSYLRNNQLYPGESFAHSIKTWFES----------------GQCSGCGKTI :::::::::::::::::::::::::::::::::: ::: :::::: gi|750 NYSNKLLDILSYLRNNQLYPGESFAHSIKTWFESVPGKQWKGQFTTVQKSGQCLGCGKTI 300 310 320 330 340 350 350 360 370 380 390 400 KIAA03 ESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAK ::::::::::: ::: ::::::::::::.:::::::::::::.:: ::::.::::::::: gi|750 ESIQLSPEEYEFLKGGIMRDVIDGGDQYKKTTPQELKRFENFVKSCPPFDIVIDGLNVAK 360 370 380 390 400 410 410 420 430 440 450 460 KIAA03 MFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDI ::::.::::.::::::::::.::::::::::::::.: :: .::: ::::::::::::.. gi|750 MFPKARESQVLLNVVSQLAKQNLRLLVLGRKHMLRQSFQWRKDEMAEVQKQASCFFADNM 420 430 440 450 460 470 470 480 490 500 510 520 KIAA03 SEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGS >>gi|194377976|dbj|BAG63351.1| unnamed protein product [ (488 aa) initn: 1667 init1: 1667 opt: 1667 Z-score: 1996.9 bits: 379.2 E(): 1.6e-102 Smith-Waterman score: 3146; 96.516% identity (96.516% similar) in 488 aa overlap (100-571:1-488) 70 80 90 100 110 120 KIAA03 RYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLPTQPLNSEEWD :::::::::::::::::::::::::::::: gi|194 MNSQTEDHALAPVRNTIQLPTQPLNSEEWD 10 20 30 130 140 150 160 170 180 KIAA03 KLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVKYLYLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVKYLYLC 40 50 60 70 80 90 190 200 210 220 230 240 KIAA03 VFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVITPSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLEDIKKVITPSKK 100 110 120 130 140 150 250 260 270 280 290 300 KIAA03 NYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNKLLDIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDDNYSNKLLDIL 160 170 180 190 200 210 310 320 330 340 350 KIAA03 SYLRNNQLYPGESFAHSIKTWFES----------------GQCSGCGKTIESIQLSPEEY ::::::::: :::::::::::::: :::::::::::::::::::: gi|194 SYLRNNQLYLGESFAHSIKTWFESVPGKQWKGQFTTVRKSGQCSGCGKTIESIQLSPEEY 220 230 240 250 260 270 360 370 380 390 400 410 KIAA03 ECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQL 280 290 300 310 320 330 420 430 440 450 460 470 KIAA03 LLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDPFLLYA 340 350 360 370 380 390 480 490 500 510 520 530 KIAA03 TLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSY 400 410 420 430 440 450 540 550 560 570 KIAA03 DTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT :::::::::::::::::::::::::::::::::::::: gi|194 DTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT 460 470 480 >>gi|151555748|gb|AAI49195.1| LOC532995 protein [Bos tau (395 aa) initn: 1316 init1: 1223 opt: 1657 Z-score: 1986.1 bits: 376.9 E(): 6.3e-102 Smith-Waterman score: 1862; 74.046% identity (86.514% similar) in 393 aa overlap (5-377:1-390) 10 20 30 40 50 KIAA03 SHCIMTFYLFGIRSFPKLWKS-PYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQN ::::. ::::::::::: :.::. .:::.:::: : :::::.. ::.:::: :: gi|151 MTFYFTGIRSFPKLWKSNSYFGLSSSHSYLSLFLKDCYGIRNQEKCFSVKTMSAQN 10 20 30 40 50 60 70 80 90 100 110 KIAA03 TKATNL-IAKARYLRK-DEGSNKQVYS-VPHFFLAGAAKERSQMNSQTEDHALAPVRNTI ::: :: ::::: .:: ::.::::: . :.: :::::.::::: ...: .: ::.: : gi|151 TKAMNLLIAKARCVRKLDESSNKQVSADSSHMFAAGAAKKRSQMNPSSKDPVLPPVENII 60 70 80 90 100 110 120 130 140 150 160 170 KIAA03 QLPTQPLNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGI ::::.::::::::::::..:: :..::.::: ::. ::::.:::::.::::::::.:: gi|151 QLPTKPLNSEEWDKLKEEFKE---KANFENWIILQMVKCHSSVDVAKSVLAWVAAKNSGI 120 130 140 150 160 170 180 190 200 210 220 230 KIAA03 VSYDLLVKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLL :.:::::::::::::: ::::.:::.:::::::: :: .:.::.::::..::::::::: gi|151 VGYDLLVKYLYLCVFHKQTSEIIDVYEIMKARYKRLESGAYTLLMRGLIYTDRWREALLL 180 190 200 210 220 230 240 250 260 270 280 290 KIAA03 LEDIKKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDI :::.:::. ::::::.:::::::.:::::.:::::::::.:::::::::::::::::::. gi|151 LEDLKKVMIPSKKNYDDCIQGALFHQDVNVAWNLYQELLSHDIVPMLETLKAFFDFGKDM 240 250 260 270 280 290 300 310 320 330 340 KIAA03 KDDNYSNKLLDILSYLRNNQLYPGESFAHSIKTWFES----------------GQCSGCG :::.::::: .:: ::::::::::::::::::::::: ::: ::: gi|151 KDDQYSNKLHNILLYLRNNQLYPGESFAHSIKTWFESIPGEQWKGQFTTIQQSGQCLGCG 300 310 320 330 340 350 350 360 370 380 390 400 KIAA03 KTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLN ::.:::.:: :::: ::.:::::::::::::.::::: gi|151 KTVESIHLSSEEYEFLKAKIMRDVIDGGDQYKKTTPQIGSLW 360 370 380 390 410 420 430 440 450 460 KIAA03 VAKMFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFA >>gi|148704784|gb|EDL36731.1| mCG22352, isoform CRA_b [M (342 aa) initn: 1267 init1: 1095 opt: 1567 Z-score: 1879.0 bits: 356.8 E(): 5.8e-96 Smith-Waterman score: 1567; 73.273% identity (87.387% similar) in 333 aa overlap (5-333:1-326) 10 20 30 40 50 KIAA03 SHCIMTFYLFGIRSFPKLWKS-PYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQN ::::: :.::.:::::: ::. :::. : . .:: :.: :::: ::.: .: : gi|148 MTFYLSGFRSIPKLWKSNPYFELGPATSSTPFFL---CAIGNQQRWFSVKPTTPPN 10 20 30 40 50 60 70 80 90 100 110 KIAA03 TKATNLI-AKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQM--NSQTEDHALAPVRNTI .:: ::. .::: :: . .: :: : ::.: :::::.::.. : :.. ::: :::... gi|148 SKALNLLDTKARTHRKGNDNNGQVSSDPHYFAAGAAKKRSHIGANPQNQGHAL-PVRSSV 60 70 80 90 100 110 120 130 140 150 160 170 KIAA03 QLPTQPLNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGI ::::.:::: ::::::::.: ::.:::..:::::: :.::::::::::::::::: gi|148 QLPTKPLNSAEWDKLKEDFK---GKASFEDFIISQMARNCCSVDVAKSLLAWVAAKNNGI 120 130 140 150 160 180 190 200 210 220 230 KIAA03 VSYDLLVKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLL :.:.:::::::::::: ::::::::.:::::.::.:: ::.::::::::::::::.::: gi|148 VGYNLLVKYLYLCVFHKQTSEVIDVYEIMKAKYKSLESGGYTLLIRGLIHSDRWRESLLL 170 180 190 200 210 220 240 250 260 270 280 290 KIAA03 LEDIKKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDI :::::::..::::::.::::::::::::::::::::::.::...: :::::::::.:::: gi|148 LEDIKKVMVPSKKNYGDCIQGALLHQDVNTAWNLYQELIGHNLIPPLETLKAFFDYGKDI 230 240 250 260 270 280 300 310 320 330 340 350 KIAA03 KDDNYSNKLLDILSYLRNNQLYPGESFAHSIKTWFESGQCSGCGKTIESIQLSPEEYECL .::.::.:::::: ::::::::::::::::::::::: gi|148 NDDHYSDKLLDILLYLRNNQLYPGESFAHSIKTWFESIPGRQWKGQFTTIQKR 290 300 310 320 330 340 360 370 380 390 400 410 KIAA03 KGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKVRESQLLLN >>gi|109083314|ref|XP_001085149.1| PREDICTED: similar to (581 aa) initn: 2173 init1: 1508 opt: 1508 Z-score: 1805.2 bits: 343.9 E(): 7.6e-92 Smith-Waterman score: 3425; 88.014% identity (93.151% similar) in 584 aa overlap (5-571:1-581) 10 20 30 40 50 KIAA03 SHCIMTFYLFGIRSFPKLWKS-PYLGLGPGHSYVSLFLADRCGIRNQQRLFSLKTMSPQN ::::::::::::::::: ::::::::::::::::.: ::::.:::::::::::::: gi|109 MTFYLFGIRSFPKLWKSNPYLGLGPGHSYVSLFLSDSCGIRSQQRLFSLKTMSPQN 10 20 30 40 50 60 70 80 90 100 110 KIAA03 TKATNLIAKARYLRKDEGSNKQVYSVPHFFLAGAAKERSQMNSQTEDHALAPVRNTIQLP :::::::::::::::.::::::: :::::: :::::.::::: :..:::: :::::::: gi|109 TKATNLIAKARYLRKEEGSNKQVSSVPHFFSAGAAKKRSQMNPQSKDHALPSVRNTIQLP 60 70 80 90 100 110 120 130 140 150 160 170 KIAA03 TQPLNSEEWDKLKEDLKENTGKTSFESWIISQMAGCHSSIDVAKSLLAWVAAKNNGIVSY ::::::::::::: :.: :::::: .:::::: :::.:::::::::::::::::::: gi|109 TQPLNSEEWDKLKADFK---GKTSFERFIISQMAHSHSSVDVAKSLLAWVAAKNNGIVSY 120 130 140 150 160 170 180 190 200 210 220 230 KIAA03 DLLVKYLYLCVFHMQTSEVIDVFEIMKARYKTLEPRGYSLLIRGLIHSDRWREALLLLED ::::.::::::::::::::::::::::.::::::: ::::::.::::::::::.:::::: gi|109 DLLVRYLYLCVFHMQTSEVIDVFEIMKTRYKTLEPGGYSLLIQGLIHSDRWRESLLLLED 180 190 200 210 220 230 240 250 260 270 280 290 KIAA03 IKKVITPSKKNYNDCIQGALLHQDVNTAWNLYQELLGHDIVPMLETLKAFFDFGKDIKDD ::::::::::::::::::::::::.::::::::::::::.:::::::::::::::::::: gi|109 IKKVITPSKKNYNDCIQGALLHQDINTAWNLYQELLGHDFVPMLETLKAFFDFGKDIKDD 240 250 260 270 280 290 300 310 320 330 340 KIAA03 NYSNKLLDILSYLRNNQLYPGESFAHSIKTWFES----------------GQCSGCGKTI :::::::::::::::::::::::::::::::::: ::: :::::: gi|109 NYSNKLLDILSYLRNNQLYPGESFAHSIKTWFESVPGKQWKGQFTTVQKSGQCLGCGKTI 300 310 320 330 340 350 350 360 370 380 390 400 KIAA03 ESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAK ::::::::::: :::.::::::::::::.:::::::::::::.:: ::::.::::::::: gi|109 ESIQLSPEEYEFLKGRIMRDVIDGGDQYKKTTPQELKRFENFVKSCPPFDIVIDGLNVAK 360 370 380 390 400 410 410 420 430 440 450 460 KIAA03 MFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDI ::::.::::.::::::::::.::::::::::::::.: :: .::: ::::::::::::.: gi|109 MFPKARESQVLLNVVSQLAKQNLRLLVLGRKHMLRQSFQWRKDEMAEVQKQASCFFADNI 420 430 440 450 460 470 470 480 490 500 510 520 KIAA03 SEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGS :.::::::::::::::::::::.::::::::::::::::::::::::::::::.: :::: gi|109 SKDDPFLLYATLHSGNHCRFITKDLMRDHKACLPDAKTQRLFFKWQQGHQLAIINGFPGS 480 490 500 510 520 530 530 540 550 560 570 KIAA03 KLTFQRILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT :::::.::::::::::::::::::::::.::: : ::::::::::::: gi|109 KLTFQHILSYDTVVQTTGDSWHIPYDEDVVERYSYEVPTKWLCLHQKT 540 550 560 570 580 >>gi|194382740|dbj|BAG64540.1| unnamed protein product [ (211 aa) initn: 1442 init1: 1442 opt: 1442 Z-score: 1732.0 bits: 328.9 E(): 9.1e-88 Smith-Waterman score: 1442; 99.052% identity (99.526% similar) in 211 aa overlap (361-571:1-211) 340 350 360 370 380 390 KIAA03 FESGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRP :::::::::::::::::::::::::::::: gi|194 MRDVIDGGDQYRKTTPQELKRFENFIKSRP 10 20 30 400 410 420 430 440 450 KIAA03 PFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEE ::::::::::::::::::::::::::::::::::.::::::::::::::: ::::::::: gi|194 PFDVVIDGLNVAKMFPKVRESQLLLNVVSQLAKRSLRLLVLGRKHMLRRSFQWSRDEMEE 40 50 60 70 80 90 460 470 480 490 500 510 KIAA03 VQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQ 100 110 120 130 140 150 520 530 540 550 560 570 KIAA03 GHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GHQLAIVNRFPGSKLTFQRILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQK 160 170 180 190 200 210 KIAA03 T : gi|194 T >>gi|148704783|gb|EDL36730.1| mCG22352, isoform CRA_a [M (271 aa) initn: 1394 init1: 1394 opt: 1394 Z-score: 1672.9 bits: 318.4 E(): 1.8e-84 Smith-Waterman score: 1394; 79.447% identity (92.490% similar) in 253 aa overlap (319-571:15-267) 290 300 310 320 330 340 KIAA03 FFDFGKDIKDDNYSNKLLDILSYLRNNQLYPGESFAHSIKTWFESGQCSGCGKTIESIQL ::... .. : .::::::::.::: :.: gi|148 MVLYHHPLPAADSIPGRQWKGQFTTIQKSGQCSGCGRTIEPIHL 10 20 30 40 350 360 370 380 390 400 KIAA03 SPEEYECLKGKIMRDVIDGGDQYRKTTPQELKRFENFIKSRPPFDVVIDGLNVAKMFPKV :::::: :: :::::::::::::.:::::::::::.:..: ::::.::::::::::::: gi|148 SPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKRFESFVNSCPPFDIVIDGLNVAKMFPKG 50 60 70 80 90 100 410 420 430 440 450 460 KIAA03 RESQLLLNVVSQLAKRNLRLLVLGRKHMLRRSSQWSRDEMEEVQKQASCFFADDISEDDP :::: ::.::::::..::.::::::::::: :::: ..:::.:.::: :::::.:::::: gi|148 RESQNLLGVVSQLAQQNLQLLVLGRKHMLRPSSQWRKEEMEQVRKQAHCFFADNISEDDP 110 120 130 140 150 160 470 480 490 500 510 520 KIAA03 FLLYATLHSGNHCRFITRDLMRDHKACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQ :::::::.:::::.:::.::.::::::::::.::::::::::::::::.. : :::::: gi|148 FLLYATLNSGNHCKFITKDLLRDHKACLPDARTQRLFFKWQQGHQLAIMKGFQKSKLTFQ 170 180 190 200 210 220 530 540 550 560 570 KIAA03 RILSYDTVVQTTGDSWHIPYDEDLVERCSCEVPTKWLCLHQKT .::::::::: ::::::::::::::.: :::::::::::..:: gi|148 HILSYDTVVQRTGDSWHIPYDEDLVQRSSCEVPTKWLCLQRKTPDPC 230 240 250 260 270 571 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 17:45:07 2009 done: Wed Mar 4 17:49:26 2009 Total Scan time: 1616.310 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]