hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01081063/chunk_1/iprscan-20080502-01081063.nocrc
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Query sequence: KIAA0372
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00028                                                 239.7    2.4e-67  14

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00028    1/14     10    43 ..     1    34 []     9.8       39
SM00028    2/14     44    77 ..     1    34 []    23.1    0.038
SM00028    3/14    276   309 ..     1    34 []     9.2       46
SM00028    4/14    310   343 ..     1    34 []    22.6    0.056
SM00028    5/14    424   457 ..     1    34 []    24.2    0.018
SM00028    6/14    458   496 ..     1    34 []     6.8       85
SM00028    7/14    497   531 ..     1    34 []     9.8       39
SM00028    8/14    568   601 ..     1    34 []    27.2   0.0022
SM00028    9/14    602   635 ..     1    34 []    25.9   0.0054
SM00028   10/14    636   669 ..     1    34 []    10.8       30
SM00028   11/14    865   898 ..     1    34 []    29.3  0.00054
SM00028   12/14    984  1017 ..     1    34 []    11.8       23
SM00028   13/14   1055  1088 ..     1    34 []    10.9       29
SM00028   14/14   1404  1437 ..     1    34 []    18.3      1.1

Alignments of top-scoring domains:
SM00028: domain 1 of 14, from 10 to 43: score 9.8, E = 39
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +++ +  +    ++++y+eA+++++ +L+ + nn   
    KIAA0372    10    VKTALKSARDAIRNKEYKEALKHCKTVLKQEKNN    43   

SM00028: domain 2 of 14, from 44 to 77: score 23.1, E = 0.038
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + a+  +G+a   l++ d+A  +y+kA el+P+    
    KIAA0372    44    YNAWVFIGVAAAELEQPDQAQSAYKKAAELEPDQ    77   

SM00028: domain 3 of 14, from 276 to 309: score 9.2, E = 46
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                         l  lG   l+ ++y++A+  +++ L+  P +   
    KIAA0372   276    GPGLIGLGIKALQDKKYEDAVRNLTEGLKESPVC    309  

SM00028: domain 4 of 14, from 310 to 343: score 22.6, E = 0.056
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                         +y l++a  k+ + +eA+  +++AL++  n    
    KIAA0372   310    TSGWYHLAEAQVKMHRPKEAVLSCSQALKIVDNL    343  

SM00028: domain 5 of 14, from 424 to 457: score 24.2, E = 0.018
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ae++   +++++ ++dy +A++++++ALe d +    
    KIAA0372   424    AEVHALEALIHFTKKDYLQAEKCFQRALEKDTEV    457  

SM00028: domain 6 of 14, from 458 to 496: score 6.8, E = 85
                   *->aealynlGnaylklg.....dydeAieyyekALeldPnn<-*
                      ae++y+lG+ y  +g+++++d  +A+ ++ kA +ld      
    KIAA0372   458    AEYHYQLGLTYWFMGeetrkDKTKALTHFLKAARLDTYM    496  

SM00028: domain 7 of 14, from 497 to 531: score 9.8, E = 39
                   *->aealynlGnaylk.lgdydeAieyyekALeldPnn<-*
                       ++++ lG+ y+   gd + A  +y+kA eld ++   
    KIAA0372   497    GKVFCYLGHYYRDvVGDKNRARGCYRKAFELDDTD    531  

SM00028: domain 8 of 14, from 568 to 601: score 27.2, E = 0.0022
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       +a++++G+ ylk g++ +A+++++ AL+ dP++   
    KIAA0372   568    KWAWLRRGLYYLKAGQHSQAVADLQAALRADPKD    601  

SM00028: domain 9 of 14, from 602 to 635: score 25.9, E = 0.0054
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                        ++  lG+ayl++g y  A++ ++kA el+P+    
    KIAA0372   602    FNCWESLGEAYLSRGGYTTALKSFTKASELNPES    635  

SM00028: domain 10 of 14, from 636 to 669: score 10.8, E = 30
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +   +  + +   lg+y+eA++ y+  ++  +++   
    KIAA0372   636    IYSVFKVAAIQQILGKYKEAVAQYQMIIKKKEDY    669  

SM00028: domain 11 of 14, from 865 to 898: score 29.3, E = 0.00054
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      a a+ nlG++yl ++++++A e+++ A +ldP++   
    KIAA0372   865    AVAWTNLGVLYLTNENIEQAHEAFKMAQSLDPSY    898  

SM00028: domain 12 of 14, from 984 to 1017: score 11.8, E = 23
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      a a+  lG + ++l   +eA ++y++A+ l  +    
    KIAA0372   984    APAFTMLGYLNEHLQLKKEAANAYQRAILLLQTA    1017 

SM00028: domain 13 of 14, from 1055 to 1088: score 10.9, E = 29
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       e     ++a++ +g y+e  ++ye+AL++ ++    
    KIAA0372  1055    LEDIIGFALALFMKGLYKESSKAYERALSIVESE    1088 

SM00028: domain 14 of 14, from 1404 to 1437: score 18.3, E = 1.1
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + a+  l+++y ++g    A+ +y+k+L+l+ +    
    KIAA0372  1404    VPAWQWLAHVYQSQGMMRAAEMCYRKSLQLASQR    1437 

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