hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-01045650/chunk_1/iprscan-20080502-01045650.nocrc
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Query sequence: KIAA0370
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08389.2.ls Exportin 1-like protein                        135.7    1.2e-37   1
PF08389.2.fs Exportin 1-like protein                        133.8    4.3e-37   1
PF03810.9.fs Importin-beta N-terminal domain                 29.4    1.9e-07   1
PF03810.9.ls Importin-beta N-terminal domain                 31.1    3.5e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03810.9.fs   1/1      38   104 ..     1    85 []    29.4  1.9e-07
PF03810.9.ls   1/1      38   104 ..     1    85 []    31.1  3.5e-06
PF08389.2.fs   1/1     110   260 ..     1   171 []   133.8  4.3e-37
PF08389.2.ls   1/1     110   260 ..     1   171 []   135.7  1.2e-37

Alignments of top-scoring domains:
PF03810.9.fs: domain 1 of 1, from 38 to 104: score 29.4, E = 1.9e-07
                   *->AEkqLeqlekqklPgFllaLlqIlansdtssdlqvRqlAalyLKNlI
                       E+ L+++++q   g++ ++l+ l++  t  + +v + ++  ++NlI
    KIAA0370    38    IEELLNNFAQQI--GAWRFCLYFLSS--TR-NDYVMMYSLTVFENLI 79   

                   trhWnshrkqggyeqrwlslpeeekeqIknnllnllgs<-*
                   ++ W               +p+++k +I++ l +ll+    
    KIAA0370    80 NKMWL-------------GVPSQDKMEIRSCLPKLLLA    104  

PF03810.9.ls: domain 1 of 1, from 38 to 104: score 31.1, E = 3.5e-06
                   *->AEkqLeqlekqklPgFllaLlqIlansdtssdlqvRqlAalyLKNlI
                       E+ L+++++q   g++ ++l+ l++  t  + +v + ++  ++NlI
    KIAA0370    38    IEELLNNFAQQI--GAWRFCLYFLSS--TR-NDYVMMYSLTVFENLI 79   

                   trhWnshrkqggyeqrwlslpeeekeqIknnllnllgs<-*
                   ++ W               +p+++k +I++ l +ll+    
    KIAA0370    80 NKMWL-------------GVPSQDKMEIRSCLPKLLLA    104  

PF08389.2.fs: domain 1 of 1, from 110 to 260: score 133.8, E = 4.3e-37
                   *->pkflrnKLalalaelakqewPnnWptffpdlvsllssspsgcellLr
                      p f+rnKL+ +++++ +q+wP+ +++ff+++++l++s p +++l L+
    KIAA0370   110    PYFIRNKLCKVIVDIGRQDWPMFYHDFFTNILQLIQS-PVTTPLGLI 155  

                   iLkvLpEEifdqdfsrtpltqdrfnnrlkdllrsqDcmeqilelllqiLe
                   +Lk+ +EE+++   +r++l+ +r +++l++ll +q  ++++l ll+ iLe
    KIAA0370   156 MLKTTSEELAC---PREDLSVAR-KEELRKLLLDQ--VQTVLGLLTGILE 199  

                   ssqsthssetqe.kAkqssellsatLkclgswlslgWipiglianvnpi.
                   +++++hs    + +++++s +   + + l++ l+    +    +n +pi+
    KIAA0370   200 TVWDKHSV---TaATPPPSPTSGESGDLLSNLLQ--SPSSAKLLN-QPIp 243  

                   llnllfslLsgpesdpdlreaAveCL<-*
                   +l+  ++++         +  A+eCL   
    KIAA0370   244 ILDVESEYI---------CSLALECL    260  

PF08389.2.ls: domain 1 of 1, from 110 to 260: score 135.7, E = 1.2e-37
                   *->pkflrnKLalalaelakqewPnnWptffpdlvsllssspsgcellLr
                      p f+rnKL+ +++++ +q+wP+ +++ff+++++l++s p +++l L+
    KIAA0370   110    PYFIRNKLCKVIVDIGRQDWPMFYHDFFTNILQLIQS-PVTTPLGLI 155  

                   iLkvLpEEifdqdfsrtpltqdrfnnrlkdllrsqDcmeqilelllqiLe
                   +Lk+ +EE+++   +r++l+ +r +++l++ll +q  ++++l ll+ iLe
    KIAA0370   156 MLKTTSEELAC---PREDLSVAR-KEELRKLLLDQ--VQTVLGLLTGILE 199  

                   ssqsthssetqe.kAkqssellsatLkclgswlslgWipiglianvnpi.
                   +++++hs    + +++++s +   + + l++ l+    +    +n +pi+
    KIAA0370   200 TVWDKHSV---TaATPPPSPTSGESGDLLSNLLQ--SPSSAKLLN-QPIp 243  

                   llnllfslLsgpesdpdlreaAveCL<-*
                   +l+  ++++         +  A+eCL   
    KIAA0370   244 ILDVESEYI---------CSLALECL    260  

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