hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00513704/chunk_1/iprscan-20080502-00513704.nocrc
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Query sequence: KIAA0362
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00325                                                 222.0    5.3e-62   1
SM00516                                                 100.7    1.8e-25   1
SM00233                                                  59.7    3.9e-13   1
SM00150                                                  57.1    2.2e-12   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00516     1/1      90   236 ..     1   184 []   100.7  1.8e-25
SM00150     1/1     369   470 ..     1   104 []    57.1  2.2e-12
SM00325     1/1     650   825 ..     1   211 []   222.0  5.3e-62
SM00233     1/1     845   962 ..     1    82 []    59.7  3.9e-13

Alignments of top-scoring domains:
SM00516: domain 1 of 1, from 90 to 236: score 100.7, E = 1.8e-25
                   *->elevgkayipggrigtregyDkdGrpVlieragrfdpkgllksvtle
                       l++  ay++ggr       + dG pV+ ++ ++      ++s++++
    KIAA0362    90    QLKKRFAYLSGGR-------GQDGSPVITFPDYP------AFSEIPD 123  

                   ellrylvyvlEkalqelpaklekktggiegftvifDlkglsmsnfwspdl
                   + +++++ +l ++ +        ++ gi gf+ ++D +  +        +
    KIAA0362   124 KEFQNVMTYLTSIPSL-------QDAGI-GFILVIDRRRDK--------W 157  

                   sllrkilkilqdhYPErLgkvliiNpPwvmaffrvlwkiikpFldektre
                   + +++ +  + +++P++L+ vl+ +p+ +  f r+l +i+ +F +++++ 
    KIAA0362   158 TSVKASVLRIAASFPANLQLVLVLRPTGF--FQRTLSDIAFKFNRDDFKM 205  

                   KivfvgpnkVsdsdwkeeLlkyidpeqLPeelGGtlk<-*
                   K+ +++       +++ +L+ yid++qL+e+lGGtl+   
    KIAA0362   206 KVPVIML------SSVPDLHGYIDKSQLTEDLGGTLD    236  

SM00150: domain 1 of 1, from 369 to 470: score 57.1, E = 2.2e-12
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                      ++F +  +e++a l+ + +++++ +d+g  ++l++ve ll+ +  +e
    KIAA0362   369    RHFEQGFREVKAILDAASqKIATFTDIG--NSLAHVEHLLRDLASFE 413  

                   aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela
                   +      er  al   geqLi + +h++ ++I+ +++el++  ++  +  
    KIAA0362   414 EKSGVAVERARALSLDGEQLIGN-KHYAVDSIRPKCQELRHLCDQFSAEI 462  

                   eeRrqkLe<-*
                   ++Rr  L    
    KIAA0362   463 ARRRGLLS    470  

SM00325: domain 1 of 1, from 650 to 825: score 222.0, E = 5.3e-62
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      v+ ELl+TEr+YV++L +++e++  +++++++ +ll    +++++ l
    KIAA0362   650    VMSELLDTERAYVEELLCVLEGYAAEMDNPLMAHLLSTGLHNKKDVL 696  

                   FgpNieeiyefH.rrFLdeLeerveewllskdlKsernsviedsgerigd
                   Fg N+eeiy fH+r+FL eLe + +                   +e++g+
    KIAA0362   697 FG-NMEEIYHFHnRIFLRELENYTDC------------------PELVGR 727  

                   vFlklfsaeeffkiYseYcsnhpdalellkkLmkkkknpaFqkflkeies
                   +Fl+    +e+f+iY +Yc+n+p++++l+++ +   ++++F++++++   
    KIAA0362   728 CFLER---MEDFQIYEKYCQNKPRSESLWRQ-C---SDCPFFQECQRKLD 770  

                   kpncrsksearltLeslLikPvQRltkYpLLLkellkhtppdhedredLk
                   +         +l+L+s+L+kPvQR+tkY+LLLke+lk++  ++e  edL+
    KIAA0362   771 H---------KLSLDSYLLKPVQRITKYQLLLKEMLKYSR-NCEGAEDLQ 810  

                   kAleaikelasqvNe<-*
                   +Al +i  ++++vN+   
    KIAA0362   811 EALSSILGILKAVND    825  

SM00233: domain 1 of 1, from 845 to 962: score 59.7, E = 3.9e-13
                   *->vikeGwLlkks.............k.swkkryfvLfngvLlyyksk.
                      ++++G  ++++++++++++ +   + + ++r+++L+++ +l++k+++
    KIAA0362   845    LLMQGSFSVWTdhkrghtkvkelaRfKPMQRHLFLHEKAVLFCKKRe 891  

                   ............kpkgsipLsgcsvre.p.....cFeivt.dr..tlllq
                   +++++ ++ ++ ++k s+++  + ++e+++++ + Fei+++ r++++++q
    KIAA0362   892 engegyekapsySYKQSLNMAAVGITEnVkgdakKFEIWYnAReeVYIVQ 941  

                   AeseeereeWvealqsaiaka<-*
                   A+++e +  Wv+ +++++ ++   
    KIAA0362   942 APTPEIKAAWVNEIRKVLTSQ    962  

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