# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg01396.fasta.nr -Q ../query/KIAA0340.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0340, 1053 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7813441 sequences Expectation_n fit: rho(ln(x))= 6.4385+/-0.000206; mu= 9.5485+/- 0.011 mean_var=142.3360+/-27.282, 0's: 41 Z-trim: 78 B-trim: 2 in 1/66 Lambda= 0.107502 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|19909898|dbj|BAB87121.1| RIM short form [Homo s (1028) 6957 1091.5 0 gi|19909970|dbj|BAB87242.1| RIM long form [Homo sa (1470) 6950 1090.5 0 gi|68349554|gb|AAY96658.1| regulating synaptic mem (1028) 6898 1082.3 0 gi|68349552|gb|AAY96657.1| regulating synaptic mem ( 946) 6328 993.9 0 gi|2317778|gb|AAB66703.1| rab3 effector [Rattus no (1553) 5660 890.5 0 gi|34395745|sp|Q9JIR4.1|RIMS1_RAT RecName: Full=Re (1615) 5660 890.5 0 gi|148682448|gb|EDL14395.1| regulating synaptic me (1548) 5549 873.3 0 gi|119901074|ref|XP_613769.3| PREDICTED: similar t (1568) 5238 825.0 0 gi|55960263|emb|CAI16961.1| regulating synaptic me (1039) 3829 606.3 2.6e-170 gi|34395763|sp|Q86UR5.1|RIMS1_HUMAN RecName: Full= (1692) 3829 606.5 3.6e-170 gi|126310373|ref|XP_001373346.1| PREDICTED: simila (1694) 3680 583.4 3.3e-163 gi|119569177|gb|EAW48792.1| regulating synaptic me ( 556) 3659 579.7 1.4e-162 gi|119569172|gb|EAW48787.1| regulating synaptic me ( 993) 3659 579.9 2.2e-162 gi|119569174|gb|EAW48789.1| regulating synaptic me (1058) 3659 580.0 2.3e-162 gi|194223659|ref|XP_001918224.1| PREDICTED: simila (1568) 3656 579.7 4.1e-162 gi|119569176|gb|EAW48791.1| regulating synaptic me ( 860) 3652 578.8 4.1e-162 gi|119569178|gb|EAW48793.1| regulating synaptic me ( 888) 3652 578.8 4.2e-162 gi|119569181|gb|EAW48796.1| regulating synaptic me ( 998) 3652 578.9 4.6e-162 gi|119569179|gb|EAW48794.1| regulating synaptic me (1032) 3652 578.9 4.7e-162 gi|119569173|gb|EAW48788.1| regulating synaptic me (1060) 3652 578.9 4.8e-162 gi|149069191|gb|EDM18632.1| regulating synaptic me (1045) 3548 562.7 3.4e-157 gi|73973280|ref|XP_538998.2| PREDICTED: similar to (1691) 3542 562.0 9e-157 gi|73973278|ref|XP_867334.1| PREDICTED: similar to (1567) 3537 561.2 1.5e-156 gi|73973276|ref|XP_867327.1| PREDICTED: similar to (1628) 3537 561.2 1.5e-156 gi|118088916|ref|XP_419884.2| PREDICTED: similar t (1695) 3524 559.2 6.3e-156 gi|119569175|gb|EAW48790.1| regulating synaptic me ( 809) 3515 557.5 9.9e-156 gi|221040646|dbj|BAH12000.1| unnamed protein produ ( 980) 3494 554.3 1.1e-154 gi|38231924|gb|AAR14800.1| RIM1 splicing variant-4 (1350) 3306 525.3 8.1e-146 gi|38231922|gb|AAR14799.1| RIM1 splicing variant-3 (1374) 3306 525.3 8.2e-146 gi|38231920|gb|AAR14798.1| RIM1 splicing variant-2 (1435) 3306 525.4 8.4e-146 gi|122065961|sp|Q99NE5.2|RIMS1_MOUSE RecName: Full (1463) 3306 525.4 8.5e-146 gi|194215032|ref|XP_001494286.2| PREDICTED: simila (1338) 3245 515.9 5.6e-143 gi|221040536|dbj|BAH11945.1| unnamed protein produ ( 817) 3234 513.9 1.3e-142 gi|221041264|dbj|BAH12309.1| unnamed protein produ ( 826) 3233 513.8 1.5e-142 gi|221045604|dbj|BAH14479.1| unnamed protein produ ( 826) 3219 511.6 6.6e-142 gi|221040470|dbj|BAH11906.1| unnamed protein produ (1012) 3217 511.4 9.4e-142 gi|38231926|gb|AAR14801.1| RIM1 splicing variant-5 (1299) 3175 505.0 1e-139 gi|134024398|gb|AAI35773.1| Rims1 protein [Xenopus (1518) 3103 493.9 2.6e-136 gi|221039684|dbj|BAH11605.1| unnamed protein produ ( 736) 2880 459.0 4.1e-126 gi|73974264|ref|XP_859187.1| PREDICTED: similar to (1294) 2871 457.8 1.6e-125 gi|73974266|ref|XP_859226.1| PREDICTED: similar to (1354) 2871 457.9 1.6e-125 gi|73974276|ref|XP_859414.1| PREDICTED: similar to (1527) 2871 457.9 1.8e-125 gi|149066474|gb|EDM16347.1| regulating synaptic me (1292) 2860 456.1 5.2e-125 gi|149066477|gb|EDM16350.1| regulating synaptic me (1352) 2860 456.2 5.4e-125 gi|149066472|gb|EDM16345.1| regulating synaptic me (1524) 2860 456.2 5.8e-125 gi|149066471|gb|EDM16344.1| regulating synaptic me (1538) 2860 456.2 5.9e-125 gi|8925870|gb|AAF81650.1|AF199328_1 RIM2-4B [Rattu (1292) 2855 455.4 8.9e-125 gi|8925860|gb|AAF81645.1|AF199323_1 RIM2-2A [Rattu (1352) 2855 455.4 9.2e-125 gi|8925876|gb|AAF81653.1|AF199331_1 RIM2-5B [Rattu (1525) 2855 455.4 1e-124 gi|8925874|gb|AAF81652.1|AF199330_1 RIM2-5A [Rattu (1539) 2855 455.4 1e-124 >>gi|19909898|dbj|BAB87121.1| RIM short form [Homo sapie (1028 aa) initn: 6957 init1: 6957 opt: 6957 Z-score: 5835.9 bits: 1091.5 E(): 0 Smith-Waterman score: 6957; 100.000% identity (100.000% similar) in 1028 aa overlap (26-1053:1-1028) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|199 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 110 120 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 PVPAEAPELKAQEPLRKQSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 PVPAEAPELKAQEPLRKQSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKR 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 WQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 WQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA 700 710 720 730 740 750 790 800 810 820 830 840 KIAA03 TDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 TDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER 760 770 780 790 800 810 850 860 870 880 890 900 KIAA03 MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR 820 830 840 850 860 870 910 920 930 940 950 960 KIAA03 RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRT 880 890 900 910 920 930 970 980 990 1000 1010 1020 KIAA03 THHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 THHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTR 940 950 960 970 980 990 1030 1040 1050 KIAA03 DVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR ::::::::::::::::::::::::::::::::: gi|199 DVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR 1000 1010 1020 >>gi|19909970|dbj|BAB87242.1| RIM long form [Homo sapien (1470 aa) initn: 6950 init1: 6950 opt: 6950 Z-score: 5828.1 bits: 1090.5 E(): 0 Smith-Waterman score: 6950; 100.000% identity (100.000% similar) in 1027 aa overlap (26-1052:1-1027) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|199 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 110 120 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 PVPAEAPELKAQEPLRKQSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 PVPAEAPELKAQEPLRKQSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKR 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 WQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 WQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA 700 710 720 730 740 750 790 800 810 820 830 840 KIAA03 TDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 TDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER 760 770 780 790 800 810 850 860 870 880 890 900 KIAA03 MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR 820 830 840 850 860 870 910 920 930 940 950 960 KIAA03 RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRT 880 890 900 910 920 930 970 980 990 1000 1010 1020 KIAA03 THHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|199 THHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTR 940 950 960 970 980 990 1030 1040 1050 KIAA03 DVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR :::::::::::::::::::::::::::::::: gi|199 DVDSQYLSEQDSELLMLPRAKRGRSAECLHTTSELQPFLDRARSASTNCLRPDTSLHSPE 1000 1010 1020 1030 1040 1050 gi|199 RERMHRQRSPTQSPPADTSFSSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRFK 1060 1070 1080 1090 1100 1110 >>gi|68349554|gb|AAY96658.1| regulating synaptic membran (1028 aa) initn: 6898 init1: 6898 opt: 6898 Z-score: 5786.4 bits: 1082.3 E(): 0 Smith-Waterman score: 6898; 99.125% identity (99.708% similar) in 1028 aa overlap (26-1053:1-1028) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|683 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 110 120 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|683 SRSQTPLSTAAASSQDTAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|683 GLSEQNGKGALKSERKRVPKTSAQPGEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL :::.::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|683 EGKVADEEKQRKEEEYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|683 PRTEAGAALPEGKVGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 PVPAEAPELKAQEPLRKQSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKR :::::: ::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|683 PVPAEATELKAQAPLRKQSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKR 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 QMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVT 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 WQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|683 WQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA 700 710 720 730 740 750 790 800 810 820 830 840 KIAA03 TDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 TDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRER 760 770 780 790 800 810 850 860 870 880 890 900 KIAA03 MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR 820 830 840 850 860 870 910 920 930 940 950 960 KIAA03 RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 RHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRT 880 890 900 910 920 930 970 980 990 1000 1010 1020 KIAA03 THHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|683 THHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRAR 940 950 960 970 980 990 1030 1040 1050 KIAA03 DVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR ::::::::::::::::::::::::::::::::: gi|683 DVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR 1000 1010 1020 >>gi|68349552|gb|AAY96657.1| regulating synaptic membran (946 aa) initn: 6328 init1: 6328 opt: 6328 Z-score: 5309.1 bits: 993.9 E(): 0 Smith-Waterman score: 6328; 99.049% identity (99.683% similar) in 946 aa overlap (108-1053:1-946) 80 90 100 110 120 130 KIAA03 MLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDD :::::::::::::::::::::::::::::: gi|683 RLHQQFESYKEQVRKIGEEARRYQGEHKDD 10 20 30 140 150 160 170 180 190 KIAA03 APTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 APTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEIL 40 50 60 70 80 90 200 210 220 230 240 250 KIAA03 TKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|683 TKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDT 100 110 120 130 140 150 260 270 280 290 300 310 KIAA03 APPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 APPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKR 160 170 180 190 200 210 320 330 340 350 360 370 KIAA03 VPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRDEGKAADEEKQRKEEDYQ :::::::: :::::::::::::::::::::::::::::::::::::.::::::::::.:: gi|683 VPKTSAQPGEGAVEERERKERRESRRLEKGRSQDYPDTPEKRDEGKVADEEKQRKEEEYQ 220 230 240 250 260 270 380 390 400 410 420 430 KIAA03 TRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAALPEGKAGKR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|683 TRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAALPEGKVGKR 280 290 300 310 320 330 440 450 460 470 480 490 KIAA03 APAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHGPVPAEAPELKAQEPLRK ::::::::::::::::::::::::::::::::::::::::::::::::: ::::: :::: gi|683 APAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHGPVPAEATELKAQAPLRK 340 350 360 370 380 390 500 510 520 530 540 550 KIAA03 QSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVSTPEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 QSRLDPSSAVLMLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVSTPEY 400 410 420 430 440 450 560 570 580 590 600 610 KIAA03 TSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 TSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILN 460 470 480 490 500 510 620 630 640 650 660 670 KIAA03 KRTTMPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKP :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 KRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKP 520 530 540 550 560 570 680 690 700 710 720 730 KIAA03 LPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 LPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPS 580 590 600 610 620 630 740 750 760 770 780 790 KIAA03 ISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNPYVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 ISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNPYVK 640 650 660 670 680 690 800 810 820 830 840 850 KIAA03 MYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 MYFLPDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEES 700 710 720 730 740 750 860 870 880 890 900 910 KIAA03 EFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 EFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQR 760 770 780 790 800 810 920 930 940 950 960 970 KIAA03 ISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGNDQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|683 ISDSDISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGNDQG 820 830 840 850 860 870 980 990 1000 1010 1020 1030 KIAA03 KPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTRDVDSQYLSEQDSELLML :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|683 KPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRARDVDSQYLSEQDSELLML 880 890 900 910 920 930 1040 1050 KIAA03 PRAKRGRSAECLHTTR :::::::::::::::: gi|683 PRAKRGRSAECLHTTR 940 >>gi|2317778|gb|AAB66703.1| rab3 effector [Rattus norveg (1553 aa) initn: 5376 init1: 3548 opt: 5660 Z-score: 4746.5 bits: 890.5 E(): 0 Smith-Waterman score: 6268; 88.701% identity (93.032% similar) in 1062 aa overlap (26-1052:1-1052) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|231 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQP------------SP- :::::::::::::::::::::::::::::::::::::::.::::: .: gi|231 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPS 40 50 60 70 80 90 110 120 130 140 150 KIAA03 ----------RLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLC :::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 SEEGGPERDWRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLC 100 110 120 130 140 150 160 170 180 190 200 210 KIAA03 SYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGT :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|231 SYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGT 160 170 180 190 200 210 220 230 240 250 260 270 KIAA03 LSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQAL ::::::::::::::::::::::::::::::::::.::::.: :.:: :.:::::::::: gi|231 LSDTATGAGSEVPREKKARLQERSRSQTPLSTAAVSSQDTATPGAPLHRNKGAEPSQQAL 220 230 240 250 260 270 280 290 300 310 320 330 KIAA03 GPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKE :::::::: ::::::::::::.::::::::::. :::::::::. .:: :: ..:::::: gi|231 GPEQKQAS-RSRSEPPRERKKAPGLSEQNGKGGQKSERKRVPKSVVQPGEGIADERERKE 280 290 300 310 320 330 340 350 360 370 380 390 KIAA03 RRESRRLEKGRSQDYPDTPEKRDEGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEE :::.::::::::::: : :::::.:..:...::::::.::::::::::::::::: :::: gi|231 RRETRRLEKGRSQDYSDRPEKRDNGRVAEDQKQRKEEEYQTRYRSDPNLARYPVKAPPEE 340 350 360 370 380 390 400 410 420 430 440 450 KIAA03 QQMRMHARVSRARHERRHSDVALPRTEAGAALP-EGKAGKRAPAAARASPPDSPRAYSAE ::::::::::::::::::::::::.:::.:: : :. :::::::.::.:::.:::: gi|231 QQMRMHARVSRARHERRHSDVALPHTEAAAAAPAEATAGKRAPATARVSPPESPRA---- 400 410 420 430 440 450 460 470 480 490 500 KIAA03 RTAETRAPGAKQLTNHSPPAPRHGPVPAEAPELKAQEPLRKQSRLDPSSAVL-------- :: .:. :.:.:: :: .: ::: :: .. ::::::.::::.:::: gi|231 -----RAAAAQPPTEHGPPPPRPAPGPAEPPEPRVPEPLRKQGRLDPGSAVLLRKAKREK 460 470 480 490 500 510 520 530 540 550 560 KIAA03 ---MLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCEDVEL :::::::::::::::::::::::: :::::.:::::::::::::::::::::::::: gi|231 AESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRRQMSVSSSEEEGVSTPEYTSCEDVEL 510 520 530 540 550 560 570 580 590 600 610 620 KIAA03 ESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|231 ESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKE 570 580 590 600 610 620 630 640 650 660 670 680 KIAA03 SGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 SGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEE 630 640 650 660 670 680 690 700 710 720 730 740 KIAA03 VYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 VYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTS 690 700 710 720 730 740 750 760 770 780 790 800 KIAA03 PGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRS ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|231 PGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRS 750 760 770 780 790 800 810 820 830 840 850 860 KIAA03 DKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILI ::::::::::::.:::::::::::::::::::::::::::::::::::.::::::::::: gi|231 DKSKRRTKTVKKLLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQDEESEFLGEILI 810 820 830 840 850 860 870 880 890 900 910 920 KIAA03 ELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 ELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISD 870 880 890 900 910 920 930 940 950 960 970 980 KIAA03 YEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRSRLPN ::::::::::::::::.::::::.::::::::::::::::::::::::.:::.::::::: gi|231 YEVDDGIGVVPPVGYRASARESKATTLTVPEQQRTTHHRSRSVSPHRGDDQGRPRSRLPN 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 KIAA03 VPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTRDVDSQYLSEQDSELLMLPRAKRGRS :::::::::::::::::::::::::::::.:::.: :.::: :: ::::::::::::::: gi|231 VPLQRSLDEIHPTRRSRSPTRHHDASRSPADHRSRHVESQYSSEPDSELLMLPRAKRGRS 990 1000 1010 1020 1030 1040 1050 KIAA03 AECLHTTR :: :: : gi|231 AESLHMTSELQPSLDRARSASTNCLRPDTSLHSPERERHSRKSERCSIQKQSRKGTASDA 1050 1060 1070 1080 1090 1100 >>gi|34395745|sp|Q9JIR4.1|RIMS1_RAT RecName: Full=Regula (1615 aa) initn: 5376 init1: 3548 opt: 5660 Z-score: 4746.3 bits: 890.5 E(): 0 Smith-Waterman score: 6268; 88.701% identity (93.032% similar) in 1062 aa overlap (26-1052:1-1052) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|343 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQP------------SP- :::::::::::::::::::::::::::::::::::::::.::::: .: gi|343 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPS 40 50 60 70 80 90 110 120 130 140 150 KIAA03 ----------RLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLC :::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 SEEGGPERDWRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLC 100 110 120 130 140 150 160 170 180 190 200 210 KIAA03 SYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGT :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|343 SYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGT 160 170 180 190 200 210 220 230 240 250 260 270 KIAA03 LSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQAL ::::::::::::::::::::::::::::::::::.::::.: :.:: :.:::::::::: gi|343 LSDTATGAGSEVPREKKARLQERSRSQTPLSTAAVSSQDTATPGAPLHRNKGAEPSQQAL 220 230 240 250 260 270 280 290 300 310 320 330 KIAA03 GPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKE :::::::: ::::::::::::.::::::::::. :::::::::. .:: :: ..:::::: gi|343 GPEQKQAS-RSRSEPPRERKKAPGLSEQNGKGGQKSERKRVPKSVVQPGEGIADERERKE 280 290 300 310 320 330 340 350 360 370 380 390 KIAA03 RRESRRLEKGRSQDYPDTPEKRDEGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEE :::.::::::::::: : :::::.:..:...::::::.::::::::::::::::: :::: gi|343 RRETRRLEKGRSQDYSDRPEKRDNGRVAEDQKQRKEEEYQTRYRSDPNLARYPVKAPPEE 340 350 360 370 380 390 400 410 420 430 440 450 KIAA03 QQMRMHARVSRARHERRHSDVALPRTEAGAALP-EGKAGKRAPAAARASPPDSPRAYSAE ::::::::::::::::::::::::.:::.:: : :. :::::::.::.:::.:::: gi|343 QQMRMHARVSRARHERRHSDVALPHTEAAAAAPAEATAGKRAPATARVSPPESPRA---- 400 410 420 430 440 450 460 470 480 490 500 KIAA03 RTAETRAPGAKQLTNHSPPAPRHGPVPAEAPELKAQEPLRKQSRLDPSSAVL-------- :: .:. :.:.:: :: .: ::: :: .. ::::::.::::.:::: gi|343 -----RAAAAQPPTEHGPPPPRPAPGPAEPPEPRVPEPLRKQGRLDPGSAVLLRKAKREK 460 470 480 490 500 510 520 530 540 550 560 KIAA03 ---MLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCEDVEL :::::::::::::::::::::::: :::::.:::::::::::::::::::::::::: gi|343 AESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRRQMSVSSSEEEGVSTPEYTSCEDVEL 510 520 530 540 550 560 570 580 590 600 610 620 KIAA03 ESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|343 ESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKE 570 580 590 600 610 620 630 640 650 660 670 680 KIAA03 SGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 SGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEE 630 640 650 660 670 680 690 700 710 720 730 740 KIAA03 VYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 VYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTS 690 700 710 720 730 740 750 760 770 780 790 800 KIAA03 PGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRS ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|343 PGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRS 750 760 770 780 790 800 810 820 830 840 850 860 KIAA03 DKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILI ::::::::::::.:::::::::::::::::::::::::::::::::::.::::::::::: gi|343 DKSKRRTKTVKKLLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQDEESEFLGEILI 810 820 830 840 850 860 870 880 890 900 910 920 KIAA03 ELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 ELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISD 870 880 890 900 910 920 930 940 950 960 970 980 KIAA03 YEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRSRLPN ::::::::::::::::.::::::.::::::::::::::::::::::::.:::.::::::: gi|343 YEVDDGIGVVPPVGYRASARESKATTLTVPEQQRTTHHRSRSVSPHRGDDQGRPRSRLPN 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 KIAA03 VPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTRDVDSQYLSEQDSELLMLPRAKRGRS :::::::::::::::::::::::::::::.:::.: :.::: :: ::::::::::::::: gi|343 VPLQRSLDEIHPTRRSRSPTRHHDASRSPADHRSRHVESQYSSEPDSELLMLPRAKRGRS 990 1000 1010 1020 1030 1040 1050 KIAA03 AECLHTTR :: :: : gi|343 AESLHMTSELQPSLDRARSASTNCLRPDTSLHSPERERHSRKSERCSIQKQSRKGTASDA 1050 1060 1070 1080 1090 1100 >>gi|148682448|gb|EDL14395.1| regulating synaptic membra (1548 aa) initn: 5371 init1: 3096 opt: 5549 Z-score: 4653.5 bits: 873.3 E(): 0 Smith-Waterman score: 6161; 87.759% identity (92.467% similar) in 1062 aa overlap (26-1052:1-1047) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|148 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQP------------SP- :::::::::::::::::::::::::::::::::::::::.::::: .: gi|148 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAESQPHQPPLNIFRCVCVPRKPS 40 50 60 70 80 90 110 120 130 140 150 KIAA03 ----------RLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLC :::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEEGGPDRNWRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLC 100 110 120 130 140 150 160 170 180 190 200 210 KIAA03 SYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGT ::::::::::::::::::::: ::::::::::::::::::::::::::::: ::::: gi|148 SYCRTKFCARCGGRVSLRSNN----VMWVCNLCRKQQEILTKSGAWFFGSGPQQPSQDGT 160 170 180 190 200 210 220 230 240 250 260 270 KIAA03 LSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQAL ::::::::::::::::::::::::::::::::::.::::.: .:: ::.:::::::::: gi|148 LSDTATGAGSEVPREKKARLQERSRSQTPLSTAAVSSQDTASHGAPLDRNKGAEPSQQAL 220 230 240 250 260 270 280 290 300 310 320 330 KIAA03 GPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKE :::::::: ::::::::::::.::::::::::. :::::::::. .:: ::...:::::: gi|148 GPEQKQAS-RSRSEPPRERKKAPGLSEQNGKGGQKSERKRVPKSVVQPGEGTADERERKE 280 290 300 310 320 330 340 350 360 370 380 390 KIAA03 RRESRRLEKGRSQDYPDTPEKRDEGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEE :::.::::::::::::: :::..:..:..:::::::.::::::::::::::::: : :: gi|148 RRETRRLEKGRSQDYPDRLEKREDGRVAEDEKQRKEEEYQTRYRSDPNLARYPVKAPLEE 340 350 360 370 380 390 400 410 420 430 440 450 KIAA03 QQMRMHARVSRARHERRHSDVALPRTEAGAALP-EGKAGKRAPAAARASPPDSPRAYSAE ::::::::::::::::::::::::.:::.::. : ::::: ..::.:::.:::: gi|148 QQMRMHARVSRARHERRHSDVALPHTEAAAAVSAETTAGKRAQTTARVSPPESPRA---- 400 410 420 430 440 460 470 480 490 500 KIAA03 RTAETRAPGAKQLTNHSPPAPRHGPVPAEAPELKAQEPLRKQSRLDPSSAVL-------- :::.:. ..:.:: :: .: ::: :: .. ::::::.::::.:::: gi|148 -----RAPAAQPPAEHGPPPPRPAPGPAEPPEPRVPEPLRKQGRLDPGSAVLLRKAKREK 450 460 470 480 490 500 510 520 530 540 550 560 KIAA03 ---MLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCEDVEL :::::::::::::::::::::::: :::::.:::::::::::::::::::::::::: gi|148 AESMLRNDSLSSDQSESVRPSPPKPHRPKRGGKRRQMSVSSSEEEGVSTPEYTSCEDVEL 510 520 530 540 550 560 570 580 590 600 610 620 KIAA03 ESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKD ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::. gi|148 ESESVSEKGDLDY-WLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKE 570 580 590 600 610 620 630 640 650 660 670 680 KIAA03 SGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEE 630 640 650 660 670 680 690 700 710 720 730 740 KIAA03 VYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTS 690 700 710 720 730 740 750 760 770 780 790 800 KIAA03 PGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRS ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|148 PGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRS 750 760 770 780 790 800 810 820 830 840 850 860 KIAA03 DKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILI ::::::::::::.:::::::::::::::::::::::::::::::::::.::::::::::: gi|148 DKSKRRTKTVKKLLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQDEESEFLGEILI 810 820 830 840 850 860 870 880 890 900 910 920 KIAA03 ELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISD 870 880 890 900 910 920 930 940 950 960 970 980 KIAA03 YEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRSRLPN ::::::::::::::::.::::::.::::::::::::::::::::::::.:::.::::::: gi|148 YEVDDGIGVVPPVGYRASARESKATTLTVPEQQRTTHHRSRSVSPHRGDDQGRPRSRLPN 930 940 950 960 970 980 990 1000 1010 1020 1030 1040 KIAA03 VPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTRDVDSQYLSEQDSELLMLPRAKRGRS :::::::::::::::::::::::::::: .:::.: ..::: :: ::::::::::::::: gi|148 VPLQRSLDEIHPTRRSRSPTRHHDASRSLADHRSRHAESQYSSEPDSELLMLPRAKRGRS 990 1000 1010 1020 1030 1040 1050 KIAA03 AECLHTTR ::::: : gi|148 AECLHMTSELQPSLDRARSASTNCLRPDTSLHSPERERHSRKSERSSIQKQSRKGTASDA 1050 1060 1070 1080 1090 1100 >>gi|119901074|ref|XP_613769.3| PREDICTED: similar to Re (1568 aa) initn: 5036 init1: 3558 opt: 5238 Z-score: 4392.7 bits: 825.0 E(): 0 Smith-Waterman score: 5299; 90.023% identity (94.898% similar) in 882 aa overlap (183-1053:47-922) 160 170 180 190 200 210 KIAA03 CGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQQT ::::::::::::::::::::::::::::: gi|119 DVITDTSTFNQSELEGPYLQHQRDGRMLCKVMWVCNLCRKQQEILTKSGAWFFGSGPQQP 20 30 40 50 60 70 220 230 240 250 260 270 KIAA03 SQDGTLSDTATGAGSEVPREKKARLQERSRSQTPLSTAAASSQDAAPPSAPPDRSKGAEP ::::::::::::::::.:::::::::::::::::::.::::.:: : :.: ::.::::: gi|119 SQDGTLSDTATGAGSEAPREKKARLQERSRSQTPLSSAAASAQDQATPGAQVDRTKGAEP 80 90 100 110 120 130 280 290 300 310 320 330 KIAA03 SQQALGPEQKQASSRSRSEPPRERKKTPGLSEQNGKGALKSERKRVPKTSAQPVEGAVEE . :: :::::::::::::::::.:::::::.::::::: :.::::.:.::: :.:. .:: gi|119 APQAGGPEQKQASSRSRSEPPRDRKKTPGLAEQNGKGAPKGERKRAPRTSAPPAEAPAEE 140 150 160 170 180 190 340 350 360 370 380 390 KIAA03 RERKERRESRRLEKGRSQDYPDTPEKRDEGKAADEEKQRKEEDYQTRYRSDPNLARYPVK :::::::::::::::::::: .::::.:: .:. :::::::.::::::::::::::::. gi|119 RERKERRESRRLEKGRSQDYSVVPEKREEGPVAEAEKQRKEEEYQTRYRSDPNLARYPVQ 200 210 220 230 240 250 400 410 420 430 440 450 KIAA03 PPPEEQQMRMHARVSRARHERRHSDVALPRTEAGAALPEGKAGKRAPAAARASPPDSPRA ::::::::::::::::::::::::::.:::::: :: :::. : ::: :::.::: :::: gi|119 PPPEEQQMRMHARVSRARHERRHSDVSLPRTEA-AAGPEGRPGPRAPHAARGSPPASPRA 260 270 280 290 300 310 460 470 480 490 500 KIAA03 YSAERTAETRAPGAKQLTNHSPPAPRHGPVPAEAPELKAQEPLRKQSRLDPSSAVL---- ::::::::.:::::. :.. :::::: :: :::.:: ::::::::::.:::: gi|119 YSAERTAEARAPGAQPLADSSPPAPRPGPGPAEVPE-----PLRKQSRLDPGSAVLVRKA 320 330 340 350 360 370 510 520 530 540 550 560 KIAA03 -------MLRNDSLSSDQSESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCE ::::::::::::::::::::::::.:::::.:::::::::::::::::::::: gi|119 KREKVETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKRRQMSVSSSEEEGVSTPEYTSCE 380 390 400 410 420 430 570 580 590 600 610 620 KIAA03 DVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTT 440 450 460 470 480 490 630 640 650 660 670 680 KIAA03 MPKDSGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGA :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGA 500 510 520 530 540 550 690 700 710 720 730 740 KIAA03 TNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVI 560 570 580 590 600 610 750 760 770 780 790 800 KIAA03 SPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPARVDGRPRNPYVKMYFL ::::::::::::::::::::::::::::::::::::::::::: :::::::::::::::: gi|119 SPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFL 620 630 640 650 660 670 810 820 830 840 850 860 KIAA03 PDRSDKSKRRTKTVKKILEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEESEFLG ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|119 PDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEEESEFLG 680 690 700 710 720 730 870 880 890 900 910 920 KIAA03 EILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHIHGESSSKKLQRSQRISDS ::::::::::::::::::::::::::::::::::::::::: ::::.::::::::::::: gi|119 EILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHTHGESASKKLQRSQRISDS 740 750 760 770 780 790 930 940 950 960 970 980 KIAA03 DISDYEVDDGIGVVPPVGYRSSARESKSTTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRS :.:::::::.::::::::::::.:::: .:::::::::::::::::::::::.:::.::: gi|119 DMSDYEVDDAIGVVPPVGYRSSTRESKPSTLTVPEQQRTTHHRSRSVSPHRGDDQGRPRS 800 810 820 830 840 850 990 1000 1010 1020 1030 1040 KIAA03 RLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRTRDVDSQYLSEQDSELLMLPRAK ::::::::::::::::::::::::::.::::::.:.: :::::: ::::::::::::::: gi|119 RLPNVPLQRSLDEIHPTRRSRSPTRHRDASRSPIDQRIRDVDSQCLSEQDSELLMLPRAK 860 870 880 890 900 910 1050 KIAA03 RGRSAECLHTTR :::::::::::: gi|119 RGRSAECLHTTRHLVRHYKTLPPKMPLLETCSHWDIYSSILPARTKTQTLHHECFHSRAL 920 930 940 950 960 970 >>gi|55960263|emb|CAI16961.1| regulating synaptic membra (1039 aa) initn: 3658 init1: 3658 opt: 3829 Z-score: 3213.9 bits: 606.3 E(): 2.6e-170 Smith-Waterman score: 6925; 98.941% identity (98.941% similar) in 1039 aa overlap (26-1053:1-1039) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|559 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 110 120 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG 400 410 420 430 440 450 490 500 510 520 KIAA03 PVPAEAPELKAQEPLRKQSRLDPSSAVLM-----------LRNDSLSSDQSESVRPSPPK ::::::::::::::::::::::::::::: :::::::::::::::::::: gi|559 PVPAEAPELKAQEPLRKQSRLDPSSAVLMRKAKREKVETMLRNDSLSSDQSESVRPSPPK 460 470 480 490 500 510 530 540 550 560 570 580 KIAA03 PHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 PHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSR 520 530 540 550 560 570 590 600 610 620 630 640 KIAA03 ETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 ETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFI 580 590 600 610 620 630 650 660 670 680 690 700 KIAA03 TKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 TKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGD 640 650 660 670 680 690 710 720 730 740 750 760 KIAA03 IPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 IPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKV 700 710 720 730 740 750 770 780 790 800 810 820 KIAA03 GHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 GHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVY 760 770 780 790 800 810 830 840 850 860 870 880 KIAA03 SHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSL 820 830 840 850 860 870 890 900 910 920 930 940 KIAA03 PLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 PLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKS 880 890 900 910 920 930 950 960 970 980 990 1000 KIAA03 TTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 TTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHD 940 950 960 970 980 990 1010 1020 1030 1040 1050 KIAA03 ASRSPVDHRTRDVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR :::::::::::::::::::::::::::::::::::::::::::: gi|559 ASRSPVDHRTRDVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR 1000 1010 1020 1030 >>gi|34395763|sp|Q86UR5.1|RIMS1_HUMAN RecName: Full=Regu (1692 aa) initn: 3658 init1: 3658 opt: 3829 Z-score: 3211.3 bits: 606.5 E(): 3.6e-170 Smith-Waterman score: 6925; 98.941% identity (98.941% similar) in 1039 aa overlap (26-1053:1-1039) 10 20 30 40 50 60 KIAA03 GAQLLGVHPKGESQRASRGGGQATKMSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI ::::::::::::::::::::::::::::::::::: gi|343 MSSAVGPRGPRPPTVPPPMQELPDLSHLTEEERNI 10 20 30 70 80 90 100 110 120 KIAA03 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 IMAVMDRQKEEEEKEEAMLKCVVRDMAKPAACKTPRNAENQPHQPSPRLHQQFESYKEQV 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 RKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNED 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 KVVMWVCNLCRKQQEILTKSGAWFFGSGPQQTSQDGTLSDTATGAGSEVPREKKARLQER 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 SRSQTPLSTAAASSQDAAPPSAPPDRSKGAEPSQQALGPEQKQASSRSRSEPPRERKKTP 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 GLSEQNGKGALKSERKRVPKTSAQPVEGAVEERERKERRESRRLEKGRSQDYPDTPEKRD 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 EGKAADEEKQRKEEDYQTRYRSDPNLARYPVKPPPEEQQMRMHARVSRARHERRHSDVAL 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 PRTEAGAALPEGKAGKRAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHSPPAPRHG 400 410 420 430 440 450 490 500 510 520 KIAA03 PVPAEAPELKAQEPLRKQSRLDPSSAVLM-----------LRNDSLSSDQSESVRPSPPK ::::::::::::::::::::::::::::: :::::::::::::::::::: gi|343 PVPAEAPELKAQEPLRKQSRLDPSSAVLMRKAKREKVETMLRNDSLSSDQSESVRPSPPK 460 470 480 490 500 510 530 540 550 560 570 580 KIAA03 PHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 PHRSKRGGKKRQMSVSSSEEEGVSTPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSR 520 530 540 550 560 570 590 600 610 620 630 640 KIAA03 ETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 ETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKDSGALLGLKVVGGKMTDLGRLGAFI 580 590 600 610 620 630 650 660 670 680 690 700 KIAA03 TKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 TKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGD 640 650 660 670 680 690 710 720 730 740 750 760 KIAA03 IPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 IPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKV 700 710 720 730 740 750 770 780 790 800 810 820 KIAA03 GHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 GHQLIVNVLQATDLPARVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKILEPKWNQTFVY 760 770 780 790 800 810 830 840 850 860 870 880 KIAA03 SHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 SHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSL 820 830 840 850 860 870 890 900 910 920 930 940 KIAA03 PLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 PLPQPSPFMPRRHIHGESSSKKLQRSQRISDSDISDYEVDDGIGVVPPVGYRSSARESKS 880 890 900 910 920 930 950 960 970 980 990 1000 KIAA03 TTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 TTLTVPEQQRTTHHRSRSVSPHRGNDQGKPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHD 940 950 960 970 980 990 1010 1020 1030 1040 1050 KIAA03 ASRSPVDHRTRDVDSQYLSEQDSELLMLPRAKRGRSAECLHTTR :::::::::::::::::::::::::::::::::::::::::::: gi|343 ASRSPVDHRTRDVDSQYLSEQDSELLMLPRAKRGRSAECLHTTRHLVRHYKTLPPKMPLL 1000 1010 1020 1030 1040 1050 gi|343 QSSSHWNIYSSILPAHTKTKSVTRQDISLHHECFNSTVLRFTDEILVSELQPFLDRARSA 1060 1070 1080 1090 1100 1110 1053 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 14:17:19 2009 done: Wed Mar 4 14:20:53 2009 Total Scan time: 1729.060 Total Display time: 0.910 Function used was FASTA [version 34.26.5 April 26, 2007]