hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00060722/chunk_1/iprscan-20080502-00060722.nocrc
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Query sequence: KIAA0335
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00096.16.ls Zinc finger, C2H2 type                          99.1    1.2e-26   7
PF00096.16.fs Zinc finger, C2H2 type                          85.4    1.7e-22   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.ls   6/7     263   286 ..     1    24 []    22.2   0.0017

Alignments of top-scoring domains:
PF00096.16.ls: domain 6 of 7, from 263 to 286: score 22.2, E = 0.0017
                   *->ykCpfdCgksFsrksnLkrHlrt.H<-*
                      ++C+ +C +  +r+++L rH  t H   
    KIAA0335   263    FTCQ-YCSYGATRREHLVRHVITlH    286  

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