hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-00005850/chunk_1/iprscan-20080502-00005850.nocrc
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Query sequence: KIAA0332
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00582                                                 154.2    1.3e-41   1
SM00648                                                  84.9    9.9e-21   1
SM00360                                                  77.1    2.2e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00360    1/1     274   350 ..     1   121 []    77.1  2.2e-18
SM00648    1/1     427   481 ..     1    54 []    84.9  9.9e-21
SM00582    1/1     536   675 ..     1   146 []   154.2  1.3e-41

Alignments of top-scoring domains:
SM00360: domain 1 of 1, from 274 to 350: score 77.1, E = 2.2e-18
                   *->tlfVgNLndppdvteedLrelFkevksvevfraeteskfGkvvsvri
                      +l+ gN+  +p+++ee+L + F              ++fG++ sv+i
    KIAA0332   274    NLYLGNI--NPQMNEEMLCQEF--------------GRFGPLASVKI 304  

                   vrdkdnilirressleqkvqlgkdsgTGkskGfaFVeFedeedAekAlli
                   +  ++                  d++  + ++++FV F +++dAe+A  +
    KIAA0332   305 MWPRT------------------DEERARERNCGFVAFMNRRDAERA--L 334  

                   ealnaskGkeledgGrptlglrVe<-*
                   ++ln   Gk++  +  +   ++++   
    KIAA0332   335 KNLN---GKMI--MSFE---MKLG    350  

SM00648: domain 1 of 1, from 427 to 481: score 84.9, E = 9.9e-21
                   *->ldiIdktAqFVarnGpeFEaklmekeknNpqFdFLkp.ndpyhaYYr
                      l +I+++ +FV+r Gp+FEa++m +e nNp+F FL++++ p h+YYr
    KIAA0332   427    LALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFEnQTPAHVYYR 473  

                   kklaeyse<-*
                   +kl+++ +   
    KIAA0332   474 WKLYSILQ    481  

SM00582: domain 1 of 1, from 536 to 675: score 154.2, E = 1.3e-41
                   *->afeqkLesLldskTfnsqesIqtlTkwaienashakeeIVelwek..
                      ++++kLe+ l+ +T +++++I++++ ++++na++a+e IV++++++ 
    KIAA0332   536    EQRDKLEEILRGLT-PRKNDIGDAMVFCLNNAEAAEE-IVDCITEsl 580  

                   yikkapsdkqKLplLYLldsIvqnskrkyaknseSsNvtgsefkdelgpv
                    i+k+p + +K+++LYL++++++ns  k+a++s+    ++++f+ +l+++
    KIAA0332   581 SILKTPLP-KKIARLYLVSDVLYNSSAKVANASY----YRKFFETKLCQI 625  

                   fqk...alrdvdealqkaGtpeevkkkirrllniWeeRgvFppevlqple
                   f++ + ++r+++++lq    +e++k++++ +++ We++ ++p+++l +l+
    KIAA0332   626 FSDlnaTYRTIQGHLQ----SENFKQRVMTCFRAWEDWAIYPEPFLIKLQ 671  

                   eklk<-*
                   + ++   
    KIAA0332   672 NIFL    675  

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