hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23592198/chunk_1/iprscan-20080501-23592198.nocrc
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Query sequence: KIAA0331
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 689.2   1.2e-202   1
SM00423                                                  50.3    2.5e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1      97   539 ..     1   532 []   689.2 1.2e-202
SM00423    1/1     557   612 ..     1    56 []    50.3  2.5e-10

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 97 to 539: score 689.2, E = 1.2e-202
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      ++++llde +   rl+VG+r+ +ysLsl+ +s        ++++wps
    KIAA0331    97    LHTMLLDEYQE--RLFVGGRDLVYSLSLERISD-----GYKEIHWPS 136  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                   +        k+eeC++kgk    + ++eC+Ny+rvL+ +n+    thL++
    KIAA0331   137 TAL------KMEECIMKGK----D-AGECANYVRVLHHYNR----THLLT 171  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CGT+af P  +C++i++g +        ed+ ++l+++     +se grg
    KIAA0331   172 CGTGAFDP--VCAFIRVGYHL-------EDPLFHLESP-----RSERGRG 207  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   +CP+dP++s++s ++++      eL++g + d ++       +d++ifRs
    KIAA0331   208 RCPFDPSSSFISTLIGS------ELFAGLYSDYWS-------RDAAIFRS 244  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipes.g.dgdfV
                   +g        + +++rt+ +d ++   l+ep+FV+++ ip+++++d+++V
    KIAA0331   245 MG--------RLAHIRTEHDDERL---LKEPKFVGSYMIPDNeDrDDNKV 283  

                   YFFFrEtaveainrdcssekavvsRVARvCknDvGGqrlLqkkWtSFLKa
                   YFFF+E a ea    +  ++a+++RV+R+C nDvGGqr+L++kW++FLKa
    KIAA0331   284 YFFFTEKALEA----ENNAHAIYTRVGRLCVNDVGGQRILVNKWSTFLKA 329  

                   rLnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYgVFsqg
                   rL+Csvpg +g++ +yF+eL +vfllp+    r+++   ++v++g F   
    KIAA0331   330 RLVCSVPGMNGID-TYFDELEDVFLLPT----RDHK---NPVIFGLFN-- 369  

                   qqtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpvegn
                     t+s    n+++g A+C++++++I+a+Fn Gp++++egp+++w  +eg 
    KIAA0331   370 --TTS----NIFRGHAICVYHMSSIRAAFN-GPYAHKEGPEYHWSVYEG- 411  

                   kvPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpPltg
                   kvPyprPG+C+s+ ++    ++++kd+Pdd + f+++hpLm++a++P + 
    KIAA0331   412 KVPYPRPGSCASKVNGG--RYGTTKDYPDDAIRFARSHPLMYQAIKPAHK 459  

                   rPllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvvvsr
                   +P+lvkt+++y+l +iaVdrv+++dG+   y+VlF+GT++G vlKv+ ++
    KIAA0331   460 KPILVKTDGKYNLKQIAVDRVEAEDGQ---YDVLFIGTDNGIVLKVITIY 506  

                   sssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   +++   ++++e+v+leelq+f+++  pi +m++ssk+   
    KIAA0331   507 NQE---MESMEEVILEELQIFKDP-VPIISMEISSKR    539  

SM00423: domain 1 of 1, from 557 to 612: score 50.3, E = 2.5e-10
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrg...erCderrgsr
                      +C+ yg + C++C+lardpy C+W+  +  C+r+ +++   +rr++r
    KIAA0331   557    HCDMYG-SACADCCLARDPY-CAWD--GISCSRYyptGTHAKRRFRR 599  

                   qnwssg.pssqCp<-*
                   q++++g+ ++qC    
    KIAA0331   600 QDVRHGnAAQQCF    612  

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