# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hg00928.fasta.nr -Q ../query/KIAA0331.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0331, 814 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825946 sequences Expectation_n fit: rho(ln(x))= 4.6150+/-0.000185; mu= 15.9608+/- 0.010 mean_var=66.3460+/-13.109, 0's: 34 Z-trim: 47 B-trim: 2892 in 1/68 Lambda= 0.157459 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|8134690|sp|O15041.1|SEM3E_HUMAN RecName: Full=S ( 775) 5344 1223.5 0 gi|114614256|ref|XP_527803.2| PREDICTED: semaphori ( 775) 5339 1222.3 0 gi|219518233|gb|AAI44339.1| Sema domain, immunoglo ( 775) 5334 1221.2 0 gi|194386258|dbj|BAG59693.1| unnamed protein produ ( 766) 5189 1188.3 0 gi|194384160|dbj|BAG64853.1| unnamed protein produ ( 715) 4936 1130.8 0 gi|4104334|gb|AAD01996.1| semaphorin M-SemaK [Mus ( 775) 4912 1125.3 0 gi|74210786|dbj|BAE25038.1| unnamed protein produc ( 775) 4901 1122.8 0 gi|8134695|sp|P70275.2|SEM3E_MOUSE RecName: Full=S ( 775) 4900 1122.6 0 gi|149046642|gb|EDL99467.1| sema domain, immunoglo ( 775) 4878 1117.6 0 gi|1934965|emb|CAB07987.1| semaphorin H [Mus muscu ( 777) 4733 1084.7 0 gi|8134691|sp|O42237.1|SEM3E_CHICK RecName: Full=S ( 785) 4436 1017.2 0 gi|41472949|gb|AAS07488.1| unknown [Homo sapiens] ( 591) 4070 934.0 0 gi|94732445|emb|CAK03834.1| novel protein similar ( 768) 3197 735.7 1.6e-209 gi|157265863|gb|ABV26010.1| semaphorin 3E [Danio r ( 720) 3073 707.5 4.7e-201 gi|126336638|ref|XP_001380329.1| PREDICTED: simila ( 760) 2864 660.1 9.5e-187 gi|169154724|emb|CAQ13772.1| novel protein similar ( 771) 2757 635.8 2e-179 gi|149639241|ref|XP_001506000.1| PREDICTED: simila ( 839) 2705 624.0 7.6e-176 gi|8134665|sp|Q63548.1|SEM3A_RAT RecName: Full=Sem ( 772) 2695 621.7 3.5e-175 gi|8134674|sp|Q14563.1|SEM3A_HUMAN RecName: Full=S ( 771) 2692 621.0 5.5e-175 gi|73981850|ref|XP_859556.1| PREDICTED: similar to ( 771) 2692 621.0 5.5e-175 gi|8134669|sp|O08665.1|SEM3A_MOUSE RecName: Full=S ( 772) 2691 620.8 6.5e-175 gi|109503043|ref|XP_224613.3| PREDICTED: similar t ( 780) 2689 620.3 9e-175 gi|57101570|ref|XP_541852.1| PREDICTED: similar to ( 772) 2688 620.1 1e-174 gi|149705894|ref|XP_001491284.1| PREDICTED: simila ( 772) 2688 620.1 1e-174 gi|158260931|dbj|BAF82643.1| unnamed protein produ ( 771) 2683 619.0 2.3e-174 gi|114614264|ref|XP_001160811.1| PREDICTED: semaph ( 769) 2677 617.6 5.9e-174 gi|194221235|ref|XP_001915923.1| PREDICTED: simila ( 770) 2673 616.7 1.1e-173 gi|73981852|ref|XP_859593.1| PREDICTED: similar to ( 773) 2665 614.9 3.9e-173 gi|73981844|ref|XP_849675.1| PREDICTED: similar to ( 772) 2663 614.4 5.3e-173 gi|194041227|ref|XP_001928286.1| PREDICTED: simila ( 771) 2661 614.0 7.3e-173 gi|74761676|sp|Q9NS98.1|SEM3G_HUMAN RecName: Full= ( 782) 2659 613.5 1e-172 gi|73981848|ref|XP_859525.1| PREDICTED: similar to ( 773) 2653 612.2 2.6e-172 gi|8134683|sp|Q90607.1|SEM3A_CHICK RecName: Full=S ( 772) 2651 611.7 3.5e-172 gi|854330|emb|CAA59985.1| semaphorin D [Mus muscul ( 772) 2651 611.7 3.5e-172 gi|73981858|ref|XP_859682.1| PREDICTED: similar to ( 773) 2651 611.7 3.5e-172 gi|114587295|ref|XP_001172139.1| PREDICTED: semaph ( 782) 2650 611.5 4.2e-172 gi|119365060|sp|Q4LFA9.1|SEM3G_MOUSE RecName: Full ( 780) 2633 607.6 6.1e-171 gi|109067651|ref|XP_001096722.1| PREDICTED: simila ( 734) 2630 606.9 9.3e-171 gi|20384677|gb|AAK38166.1| semaphorin 3A [Xenopus ( 774) 2630 606.9 9.7e-171 gi|74210325|dbj|BAE23363.1| unnamed protein produc ( 780) 2630 606.9 9.7e-171 gi|126340456|ref|XP_001369710.1| PREDICTED: simila ( 734) 2626 606.0 1.7e-170 gi|148692850|gb|EDL24797.1| mCG3815 [Mus musculus] ( 741) 2585 596.7 1.1e-167 gi|114587293|ref|XP_516513.2| PREDICTED: semaphori ( 800) 2581 595.8 2.2e-167 gi|149034189|gb|EDL88959.1| sema domain, immunoglo ( 719) 2564 591.9 3e-166 gi|74183783|dbj|BAE24487.1| unnamed protein produc ( 688) 2527 583.5 9.8e-164 gi|10440359|dbj|BAB15715.1| FLJ00014 protein [Homo ( 725) 2527 583.5 1e-163 gi|73981860|ref|XP_859714.1| PREDICTED: similar to ( 767) 2523 582.6 2e-163 gi|118096768|ref|XP_414289.2| PREDICTED: similar t ( 681) 2509 579.4 1.7e-162 gi|703190|gb|AAA73934.1| semaphorin III ( 666) 2467 569.9 1.2e-159 gi|190339706|gb|AAI63261.1| Semaphorin 3ab [Danio ( 778) 2420 559.2 2.2e-156 >>gi|8134690|sp|O15041.1|SEM3E_HUMAN RecName: Full=Semap (775 aa) initn: 5344 init1: 5344 opt: 5344 Z-score: 6553.5 bits: 1223.5 E(): 0 Smith-Waterman score: 5344; 100.000% identity (100.000% similar) in 775 aa overlap (40-814:1-775) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :::::::::::::::::::::::::::::: gi|813 MASAGHIITLLLWGYLLELWTGGHTADTTH 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS ::::::::::::::::::::::::: gi|813 YANPQEKKLRSKPEHYRLPRHTLDS 760 770 >>gi|114614256|ref|XP_527803.2| PREDICTED: semaphorin 3E (775 aa) initn: 5339 init1: 5339 opt: 5339 Z-score: 6547.4 bits: 1222.3 E(): 0 Smith-Waterman score: 5339; 99.871% identity (100.000% similar) in 775 aa overlap (40-814:1-775) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :::::::::::::::::::::::::::::: gi|114 MASAGHIITLLLWGYLLELWTGGHTADTTH 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|114 PRLRLSHKELLNLNRTSIFHSPFGFLDLHAMLLDEYQERLFVGGRDLVYSLSLERISDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS ::::::::::::::::::::::::: gi|114 YANPQEKKLRSKPEHYRLPRHTLDS 760 770 >>gi|219518233|gb|AAI44339.1| Sema domain, immunoglobuli (775 aa) initn: 5334 init1: 5334 opt: 5334 Z-score: 6541.3 bits: 1221.2 E(): 0 Smith-Waterman score: 5334; 99.871% identity (99.871% similar) in 775 aa overlap (40-814:1-775) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :::::::::::::::::::::::::::::: gi|219 MASAGHIITLLLWGYLLELWTGGHTADTTH 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|219 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGPLA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS ::::::::::::::::::::::::: gi|219 YANPQEKKLRSKPEHYRLPRHTLDS 760 770 >>gi|194386258|dbj|BAG59693.1| unnamed protein product [ (766 aa) initn: 5209 init1: 5185 opt: 5189 Z-score: 6363.3 bits: 1188.3 E(): 0 Smith-Waterman score: 5241; 98.581% identity (98.710% similar) in 775 aa overlap (40-814:1-766) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :::::::::::::::::::::::::::::: gi|194 MASAGHIITLLLWGYLLELWTGGHTADTTH 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|194 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGPLA 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV ::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YGTTKDYPDDAIQFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS :: :::::::::::::: gi|194 YA---------KPEHYRLPRHTLDS 760 >>gi|194384160|dbj|BAG64853.1| unnamed protein product [ (715 aa) initn: 4936 init1: 4936 opt: 4936 Z-score: 6053.1 bits: 1130.8 E(): 0 Smith-Waterman score: 4936; 100.000% identity (100.000% similar) in 715 aa overlap (100-814:1-715) 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::::::::::::::::::::: gi|194 MLLDEYQERLFVGGRDLVYSLSLERISDGY 10 20 30 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH 40 50 60 70 80 90 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA 100 110 120 130 140 150 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC 160 170 180 190 200 210 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN 220 230 240 250 260 270 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR 280 290 300 310 320 330 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV 340 350 360 370 380 390 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA 400 410 420 430 440 450 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ 460 470 480 490 500 510 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD 520 530 540 550 560 570 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR 580 590 600 610 620 630 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK 640 650 660 670 680 690 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS ::::::::::::::::::::::::: gi|194 YANPQEKKLRSKPEHYRLPRHTLDS 700 710 >>gi|4104334|gb|AAD01996.1| semaphorin M-SemaK [Mus musc (775 aa) initn: 4968 init1: 4912 opt: 4912 Z-score: 6023.2 bits: 1125.3 E(): 0 Smith-Waterman score: 4912; 90.194% identity (97.677% similar) in 775 aa overlap (40-814:1-775) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :: ::::.::::::.:::::: ::.:. .. gi|410 MAPAGHILTLLLWGHLLELWTPGHSANPSY 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::.:::::::.::.::::::::::::::::::::::::::::.:::.:::: gi|410 PRLRLSHKELLELNRTSIFQSPLGFLDLHTMLLDEYQERLFVGGRDLVYSLNLERVSDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH .::.:::::.:.::::::::::.:::::.::::::::::::::.:::::: :::::::.: gi|410 REIYWPSTAVKVEECIMKGKDANECANYIRVLHHYNRTHLLTCATGAFDPHCAFIRVGHH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA :.::::::: :::::::::::::.:::.:::.:.:::::::::::.::.:::::::.:. gi|410 SEEPLFHLESHRSERGRGRCPFDPNSSFVSTLVGNELFAGLYSDYWGRDSAIFRSMGKLG 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::.::::::::::::::::.::::::::: gi|410 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::.::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|410 VNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR ::::::::::.::::::::: :::::::::::::::::.::::::::::::::::::::. gi|410 TTSNIFRGHAVCVYHMSSIREAFNGPYAHKEGPEYHWSLYEGKVPYPRPGSCASKVNGGK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::::::::::::::: :::::: :::.:::::::::::::::.:.:::::::::::::: gi|410 YGTTKDYPDDAIRFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA ::::::.::::::::::::: : :::::::::::::::.::::::::::::::::::::: gi|410 LFIGTDTGIVLKVITIYNQETEWMEEVILEELQIFKDPAPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|410 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGAHAKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::.:::.::::::.::::::::::::::::::::::::..::::::::: gi|410 QCFGQQFVGDALDRTEERLAYGIESNSTLLECTPRSLQAKVIWFVQKGRDVRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::..::::::::::::::.:::::::::::::::.::: ::.:: ::.: gi|410 RVVKMDLGLLFLRVRKSDAGTYFCQTVEHNFVHTVRKITLEVVEEHKVEGMFHKDHEEER 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK ::.:::: :..:::.::::::::::::::::::::::::::::::.::::::::::::: gi|410 HHKMPCPPLSGMSQGTKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDKKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS :::::::.:::: ::.::::::: : gi|410 YANPQEKRLRSKAEHFRLPRHTLLS 760 770 >>gi|74210786|dbj|BAE25038.1| unnamed protein product [M (775 aa) initn: 4925 init1: 4901 opt: 4901 Z-score: 6009.7 bits: 1122.8 E(): 0 Smith-Waterman score: 4901; 90.065% identity (97.548% similar) in 775 aa overlap (40-814:1-775) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :: ::::.::::::.:::::: ::.:. .. gi|742 MAPAGHILTLLLWGHLLELWTPGHSANPSY 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::.:::::::.::.::::::::::::::::::::::::::::.:::.:::: gi|742 PRLRLSHKELLELNRTSIFQSPLGFLDLHTMLLDEYQERLFVGGRDLVYSLNLERVSDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH .::.:::::.:.::::::::::.:::::.::::::::::::::.::::: :::::::.: gi|742 REIYWPSTAVKVEECIMKGKDANECANYIRVLHHYNRTHLLTCATGAFDSHCAFIRVGHH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA :.::::::: :::::::::::::.:::.:::.:.:::::::::::.::.:::::::.:. gi|742 SEEPLFHLESHRSERGRGRCPFDPNSSFVSTLVGNELFAGLYSDYWGRDSAIFRSMGKLG 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::.::::::::::::::::.::::::::: gi|742 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::.::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|742 VNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR ::::::::::.::::::::: :::::::::::::::::.::::::::::::::::::::. gi|742 TTSNIFRGHAVCVYHMSSIREAFNGPYAHKEGPEYHWSLYEGKVPYPRPGSCASKVNGGK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::::::::::::::: :::::: :::.:::::::::::::::.:.:::::::::::::: gi|742 YGTTKDYPDDAIRFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA ::::::.::::::::::::: : :::::::::::::::.::::::::::::::::::::: gi|742 LFIGTDTGIVLKVITIYNQETEWMEEVILEELQIFKDPAPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|742 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGAHAKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::.:::.::::::.::::::::::::::::::::::::..::::::::: gi|742 QCFGQQFVGDALDRTEERLAYGIESNSTLLECTPRSLQAKVIWFVQKGRDVRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::..::::::::::::::.:::::::::::::::.::: ::.:: ::.: gi|742 RVVKMDLGLLFLRVRKSDAGTYFCQTVEHNFVHTVRKITLEVVEEHKVEGMFHKDHEEER 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK ::.:::: :..:::.::::::::::::::::::::::::::::::.::::::::::::: gi|742 HHKMPCPPLSGMSQGTKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDKKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS :::::::.:::: ::.::::::: : gi|742 YANPQEKRLRSKAEHFRLPRHTLLS 760 770 >>gi|8134695|sp|P70275.2|SEM3E_MOUSE RecName: Full=Semap (775 aa) initn: 4956 init1: 4900 opt: 4900 Z-score: 6008.4 bits: 1122.6 E(): 0 Smith-Waterman score: 4900; 90.065% identity (97.548% similar) in 775 aa overlap (40-814:1-775) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :: ::::.::::::.:::::: ::.:. .. gi|813 MAPAGHILTLLLWGHLLELWTPGHSANPSY 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::.:::::::.::.::::::::::::::::::::::::::::.:::.:::: gi|813 PRLRLSHKELLELNRTSIFQSPLGFLDLHTMLLDEYQERLFVGGRDLVYSLNLERVSDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH .::.:::::.:.::::::::::.:::::.::::::::::::::.:::::: :::::::.: gi|813 REIYWPSTAVKVEECIMKGKDANECANYIRVLHHYNRTHLLTCATGAFDPHCAFIRVGHH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA :.::::::: :::::::::::::.:::.:::.:.:::::::::::.::.:::::::.:. gi|813 SEEPLFHLESHRSERGRGRCPFDPNSSFVSTLVGNELFAGLYSDYWGRDSAIFRSMGKLG 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::.::::::::::::::::.::::::::: gi|813 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::.::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|813 VNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR ::::::::::.::::::::: :::::::::::::::::.::::::::::::::::::::. gi|813 TTSNIFRGHAVCVYHMSSIREAFNGPYAHKEGPEYHWSLYEGKVPYPRPGSCASKVNGGK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::::::::::::::: ::::: :::.:::::::::::::::.:.:::::::::::::: gi|813 YGTTKDYPDDAIRFARIDPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA ::::::.::::::::::::: : :::::::::::::::.::::::::::::::::::::: gi|813 LFIGTDTGIVLKVITIYNQETEWMEEVILEELQIFKDPAPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|813 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGAHAKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::.:::.::::::.::::::::::::::::::::::::..::::::::: gi|813 QCFGQQFVGDALDRTEERLAYGIESNSTLLECTPRSLQAKVIWFVQKGRDVRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::..::::::::::::::.:::::::::::::::.::: ::.:: ::.: gi|813 RVVKMDLGLLFLRVRKSDAGTYFCQTVEHNFVHTVRKITLEVVEEHKVEGMFHKDHEEER 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK ::.:::: :..:::.::::::::::::::::::::::::::::::.::::::::::::: gi|813 HHKMPCPPLSGMSQGTKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDKKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS :::::::.:::: ::.::::::: : gi|813 YANPQEKRLRSKAEHFRLPRHTLLS 760 770 >>gi|149046642|gb|EDL99467.1| sema domain, immunoglobuli (775 aa) initn: 4905 init1: 4878 opt: 4878 Z-score: 5981.4 bits: 1117.6 E(): 0 Smith-Waterman score: 4878; 89.419% identity (97.548% similar) in 775 aa overlap (40-814:1-775) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :: .:::.::::::.:::::: :.::. .. gi|149 MAPTGHILTLLLWGHLLELWTPGYTANPSY 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :::::::::::.:::::::.:::::::::::::::::::::::::::::::.:::.:::: gi|149 PRLRLSHKELLELNRTSIFQSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLNLERVSDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH .::.:::::.:.::::::::::.::::::::::::::::::::.:::::: :::::::.: gi|149 REIYWPSTAVKVEECIMKGKDANECANYVRVLHHYNRTHLLTCATGAFDPHCAFIRVGHH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA ::::::::: :::::::::::::.:::.:::.:.:::::::::::.::.:::::.:.:. gi|149 SEDPLFHLESHRSERGRGRCPFDPNSSFVSTLVGNELFAGLYSDYWGRDSAIFRSLGKLG 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::: .:::.::::::::::::::::.::::::::: gi|149 HIRTEHDDERLLKEPKFVGSYMIPDNEDPEDNKMYFFFTEKALEAENNAHTIYTRVGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::.::::::::::::::::::::::::::::::.:::::::::::::: :::::::::: gi|149 VNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTHFDELEDVFLLPTRDPKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR ::::::::::.::::::::: :::::::::::::::::.::::::::::::::::::::. gi|149 TTSNIFRGHAVCVYHMSSIREAFNGPYAHKEGPEYHWSLYEGKVPYPRPGSCASKVNGGK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV ::.::::::::::::: :::::: :::.:::::::::::::::.:.:::::::::::::: gi|149 YGSTKDYPDDAIRFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVLKVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSASA ::::::.::::::::::::: : :::::::::::::::.::::::::::::::::::::: gi|149 LFIGTDTGIVLKVITIYNQETEWMEEVILEELQIFKDPAPIISMEISSKRQQLYIGSASA 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAAQ :::::::::::::::::::::::::::::::::::::::::.:.:::::::::::::::: gi|149 VAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGAHSKRRFRRQDVRHGNAAQ 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTDD :::::::::::::.:::.::::::.::::::::::::::::.:::::::..::::::::: gi|149 QCFGQQFVGDALDRTEERLAYGIESNSTLLECTPRSLQAKVVWFVQKGRDVRKEEVKTDD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 RVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEEDR :::::::::::::..::::::::::::::::::::::::::::::.::: ::.:: ::.. gi|149 RVVKMDLGLLFLRVRKSDAGTYFCQTVEHSFVHTVRKITLEVVEEHKVEGMFHKDREEEK 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 HHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDRKRKKLKMSPSKWK ::.:::: ...:::.::::::::::::::::::::::::::::::.::::::::::::: gi|149 HHKMPCPPLTGMSQGTKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDKKRKKLKMSPSKWK 700 710 720 730 740 750 790 800 810 KIAA03 YANPQEKKLRSKPEHYRLPRHTLDS :::::::.:::: ::.::::::: : gi|149 YANPQEKRLRSKAEHFRLPRHTLVS 760 770 >>gi|1934965|emb|CAB07987.1| semaphorin H [Mus musculus] (777 aa) initn: 4734 init1: 2788 opt: 4733 Z-score: 5803.4 bits: 1084.7 E(): 0 Smith-Waterman score: 4733; 87.259% identity (95.624% similar) in 777 aa overlap (40-814:1-777) 10 20 30 40 50 60 KIAA03 LARCPWREVLSKTQTLLKVRSEGLDGEHGSMASAGHIITLLLWGYLLELWTGGHTADTTH :: ::::.::::::.:::::: ::.:. .. gi|193 MAPAGHILTLLLWGHLLELWTPGHSANPSY 10 20 30 70 80 90 100 110 120 KIAA03 PRLRLSHKELLNLNRTSIFHSPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLERISDGY :: ::::::..:: . :..:.::::::::::::::::::::::::::::.:::.:::: gi|193 ARLPLSHKELFELNGLQYFKAPLGFLDLHTMLLDEYQERLFVGGRDLVYSLNLERVSDGY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA03 KEIHWPSTALKMEECIMKGKDAGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYH .::.:::::.:.::::::::::.:::::.::::::::::::::.:::::: :::::::.: gi|193 REIYWPSTAVKVEECIMKGKDANECANYIRVLHHYNRTHLLTCATGAFDPHCAFIRVGHH 100 110 120 130 140 150 190 200 210 220 230 240 KIAA03 LEDPLFHLESPRSERGRGRCPFDPSSSFISTLIGSELFAGLYSDYWSRDAAIFRSMGRLA :.::::::: :::::::::::::.:::.:::.:.:::::::::::.::.:::::::.:. gi|193 SEEPLFHLESHRSERGRGRCPFDPNSSFVSTLVGNELFAGLYSDYWGRDSAIFRSMGKLG 160 170 180 190 200 210 250 260 270 280 290 300 KIAA03 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKVYFFFTEKALEAENNAHAIYTRVGRLC :::::::::::::::::::::::::::::::::.::::::::::::::::.: :::: gi|193 HIRTEHDDERLLKEPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTILHPSGRLC 220 230 240 250 260 270 310 320 330 340 350 360 KIAA03 VNDVGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDHKNPVIFGLFN :::.::::::::::::::::::::::::::::::::::::::::::::: :::::::::: gi|193 VNDMGGQRILVNKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFN 280 290 300 310 320 330 370 380 390 400 410 420 KIAA03 TTSNIFRGHAICVYHMSSIRAAFNGPYAHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGR ::::::::::.::::::::: :::::::::::::::::.:::::::::: :::::::::. gi|193 TTSNIFRGHAVCVYHMSSIREAFNGPYAHKEGPEYHWSLYEGKVPYPRPRSCASKVNGGK 340 350 360 370 380 390 430 440 450 460 470 480 KIAA03 YGTTKDYPDDAIRFARSHPLMYQAIKPAHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDV :::.. ::::::::: :::::: :::.:::::::::::::::.:.:::::::::::::: gi|193 YGTNQRLPDDAIRFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAEDGQYDV 400 410 420 430 440 450 490 500 510 520 530 540 KIAA03 LFIGTDNGIVL-KVITIYNQEMESMEEVILEELQIFKDPVPIISMEISSKRQQLYIGSAS ::::::.:::: ::::::::: : :::::::::::::::.:::::::::::::::::::: gi|193 LFIGTDTGIVLLKVITIYNQETEWMEEVILEELQIFKDPAPIISMEISSKRQQLYIGSAS 460 470 480 490 500 510 550 560 570 580 590 600 KIAA03 AVAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGTHAKRRFRRQDVRHGNAA ::::::::::::::::::::::::::::::::::::::::::.: ::::::::::::::: gi|193 AVAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTGAHEKRRFRRQDVRHGNAA 520 530 540 550 560 570 610 620 630 640 650 660 KIAA03 QQCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKVIWFVQKGRETRKEEVKTD ::::::::::::::.:::.::::::.::::::::: :::::::::.::::..:::::::: gi|193 QQCFGQQFVGDALDRTEERLAYGIESNSTLLECTPLSLQAKVIWFLQKGRDVRKEEVKTD 580 590 600 610 620 630 670 680 690 700 710 720 KIAA03 DRVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLEVVEEEKVEDMFNKDDEED ::::::::::::::..::::::::::::::.:::::::::::::::.::: ::.:: ::. gi|193 DRVVKMDLGLLFLRVRKSDAGTYFCQTVEHNFVHTVRKITLEVVEEHKVEGMFHKDHEEE 640 650 660 670 680 690 730 740 750 760 770 780 KIAA03 RHHRMPCPAQSSISQGAKPWYKEFLQLIGYSN-FQRVEEYCEKVWCTDRKRKKLKMSPSK :::.:::: :..:::.::::::::::::::. :::::::::::::::.::::::::::: gi|193 RHHKMPCPPLSGMSQGTKPWYKEFLQLIGYSSKFQRVEEYCEKVWCTDKKRKKLKMSPSK 700 710 720 730 740 750 790 800 810 KIAA03 WKYANPQEKKLRSKPEHYRLPRHTLDS :::::::::.:::: ::.::::::: : gi|193 WKYANPQEKRLRSKAEHFRLPRHTLLS 760 770 814 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 13:42:46 2009 done: Wed Mar 4 13:46:20 2009 Total Scan time: 1625.040 Total Display time: 0.500 Function used was FASTA [version 34.26.5 April 26, 2007]