hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23130622/chunk_1/iprscan-20080501-23130622.nocrc
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Query sequence: KIAA0307
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00091                                                  86.6    3.1e-21   2
SM00353                                                  58.1    1.1e-12   1
SM00086                                                  31.1    0.00016   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1      68   121 ..     1    61 []    58.1  1.1e-12
SM00091    1/2     136   203 ..     1    68 []    44.2  1.8e-08
SM00091    2/2     324   390 ..     1    68 []    42.4  6.1e-08
SM00086    1/1     397   440 ..     1    43 []    31.1  0.00016

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 68 to 121: score 58.1, E = 1.1e-12
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      +++ER  r R+k+ + ++ eL+++vPt+    +  +K++K++iLr+A
    KIAA0307    68    SEIER--RKRNKMTQ-YITELSDMVPTCS---ALARKPDKLTILRMA 108  

                   ieYIrksLqeqlqe<-*
                   ++++ ks++    +   
    KIAA0307   109 VSHM-KSMRGTGNK    121  

SM00091: domain 1 of 2, from 136 to 203: score 44.2, E = 1.8e-08
                   *->erlraileslpdgiivld.ldGrilyaNpaaeellGyspeeliGksl
                      e  + ile+++ +++v+  ++Gr++y++++++  l++++ e+ G +l
    KIAA0307   136    ELKHLILEAADGFLFVVAaETGRVIYVSDSVTPVLNQPQSEWFGSTL 182  

                   lelihpedrlleevqe.lqrlla<-*
                   +e +hp+d   e ++e+l ++ +   
    KIAA0307   183 YEQVHPDDV--EKLREqLCTSEN    203  

SM00091: domain 2 of 2, from 324 to 390: score 42.4, E = 6.1e-08
                   *->erlraileslpdgiivldldGrilyaNpaaeellGyspeeliGksll
                       +  +  +   +++ +++ dG i++++p++    Gy p++l+Gk++l
    KIAA0307   324    CMDMNGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDIL 370  

                   elihpedrlleevqe.lqrlla<-*
                   e++hped+   +++e++q++++   
    KIAA0307   371 EFCHPEDQ--SHLREsFQQVVK    390  

SM00086: domain 1 of 1, from 397 to 440: score 31.1, E = 0.00016
                   *->tveyrlrrkdGsliwvlvsaspird.edgevegilgvvrDITer<-*
                      +v yr+r+k+ ++  +++s   + ++ ++e+e+i+++++++ +    
    KIAA0307   397    SVMYRFRTKNREWMLIRTSSFTFQNpYSDEIEYIICTNTNVKQL    440  

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