hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-23093127/chunk_1/iprscan-20080501-23093127.nocrc
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Query sequence: KIAA0305
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01363.12.ls FYVE zinc finger                               124.9    2.1e-34   1
PF01363.12.fs FYVE zinc finger                               123.1    7.3e-34   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01363.12.fs   1/1     750   814 ..     1    77 []   123.1  7.3e-34
PF01363.12.ls   1/1     750   814 ..     1    77 []   124.9  2.1e-34

Alignments of top-scoring domains:
PF01363.12.fs: domain 1 of 1, from 750 to 814: score 123.1, E = 7.3e-34
                   *->phWvpDeevsnCmrCgkpFtkltkRrHHCRaCGrifCgsCssktvll
                      p+WvpD+e+ nCm+C+++Ft +tkRrHHCRaCG++fCg C+++++ l
    KIAA0305   750    PTWVPDSEAPNCMNCQVKFT-FTKRRHHCRACGKVFCGVCCNRKCKL 795  

                   pylgiaallkndviekpvRVCdsCydrlnk<-*
                   +yl           ek++RVC +Cy+  +k   
    KIAA0305   796 QYL-----------EKEARVCVVCYETISK    814  

PF01363.12.ls: domain 1 of 1, from 750 to 814: score 124.9, E = 2.1e-34
                   *->phWvpDeevsnCmrCgkpFtkltkRrHHCRaCGrifCgsCssktvll
                      p+WvpD+e+ nCm+C+++Ft +tkRrHHCRaCG++fCg C+++++ l
    KIAA0305   750    PTWVPDSEAPNCMNCQVKFT-FTKRRHHCRACGKVFCGVCCNRKCKL 795  

                   pylgiaallkndviekpvRVCdsCydrlnk<-*
                   +yl           ek++RVC +Cy+  +k   
    KIAA0305   796 QYL-----------EKEARVCVVCYETISK    814  

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