hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080909/iprscan-20080909-09370164/chunk_1/iprscan-20080909-09370164.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0302 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00150 1393.3 0 17 SM00033 187.3 1.4e-51 2 SM00233 64.3 1.5e-14 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00033 1/2 83 183 .. 1 100 [] 104.4 1.3e-26 SM00033 2/2 202 300 .. 1 100 [] 82.9 3.8e-20 SM00150 1/17 332 438 .. 1 104 [] 11.4 0.81 SM00150 2/17 452 552 .. 1 104 [] 89.9 3e-22 SM00150 3/17 558 662 .. 1 104 [] 100.4 2.2e-25 SM00150 4/17 668 768 .. 1 104 [] 102.5 4.7e-26 SM00150 5/17 774 873 .. 1 104 [] 86.8 2.6e-21 SM00150 6/17 879 979 .. 1 104 [] 78.2 9.9e-19 SM00150 7/17 985 1086 .. 1 104 [] 94.4 1.4e-23 SM00150 8/17 1092 1193 .. 1 104 [] 82.6 4.6e-20 SM00150 9/17 1199 1299 .. 1 104 [] 87.0 2.2e-21 SM00150 10/17 1305 1404 .. 1 104 [] 81.2 1.3e-19 SM00150 11/17 1410 1509 .. 1 104 [] 94.3 1.4e-23 SM00150 12/17 1515 1609 .. 1 104 [] 91.4 1e-22 SM00150 13/17 1615 1715 .. 1 104 [] 96.5 3.1e-24 SM00150 14/17 1721 1822 .. 1 104 [] 86.3 3.6e-21 SM00150 15/17 1828 1928 .. 1 104 [] 83.2 3.3e-20 SM00150 16/17 1934 2034 .. 1 104 [] 91.7 8.8e-23 SM00150 17/17 2040 2280 .. 1 104 [] 35.4 7.8e-06 SM00233 1/1 2243 2354 .. 1 82 [] 64.3 1.5e-14 Alignments of top-scoring domains: SM00033: domain 1 of 2, from 83 to 183: score 104.4, E = 1.3e-26 *->eeeallrWinsll.....kvtnfssdlkDGvvLckLlnslsPagsvd +++++++W+ns+l + + +v +++sdl+DG+ L++Ll++ls + + KIAA0302 83 QKKTFTKWVNSHLarvtcRVGDLYSDLRDGRNLLRLLEVLSG-EILP 128 kkk....rfkkleNinlalsfaeklgafLGvgkvvlfdpeDlvegnenkk k ++++ r+++leN+ al+f++++ + +++ +++D+v+g n++ KIAA0302 129 KPTkgrmRIHCLENVDKALQFLKEQ-----KVHLENMGSHDIVDG--NHR 171 lilgviwtLirl<-* l+lg++wt+i++ KIAA0302 172 LTLGLVWTIILR 183 SM00033: domain 2 of 2, from 202 to 300: score 82.9, E = 3.8e-20 *->eeeallrWinsll......kvtnfssdlkDGvvLckLlnslsPagsv +++all W++ ++ + ++ +v nf+++++DG+++++ +++++P ++ KIAA0302 202 AKDALLLWCQMKTagypnvNVHNFTTSWRDGLAFNAIVHKHRP-DLL 247 dkkk..rfkkleNinlalsfaeklgafLGvgkvvlfdpeDlvegnenkkl d+ ++ +++ N+++a+++aek+ +g ++l+dpeD++ + ++ KIAA0302 248 DFESlkKCNAHYNLQNAFNLAEKE-----LGLTKLLDPEDVNV---DQPD 289 ilgviwtLirl<-* ++++i+++ + KIAA0302 290 EKSIITYVATY 300 SM00150: domain 1 of 17, from 332 to 438: score 11.4, E = 0.81 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea +++ + a el++W+e + + l++ l+ ++l++v+++l+ + ++ KIAA0302 332 EKYESLASELLQWIEQTIVTLNDRQLA--NSLSGVQNQLQSFNSYRT 376 el....aaheervdalnelgeqLiee.sghpdaeeIeerleelnerWeeL ++++ + + ++ l + + ++++ + + + + ++n++We+L KIAA0302 377 VEkppkFTEKGNLEVLLFTIQSKLRAnNQKVYTPREGRLISDINKAWERL 426 lelaeeRrqkLe<-* +++ eR+ +L KIAA0302 427 EKAEHERELALR 438 SM00150: domain 2 of 17, from 452 to 552: score 89.9, E = 3e-22 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea +F r+a+ e Wl+e ++l+s++++g l++vea +kH+a+e+ KIAA0302 452 ARFDRKAAMRETWLSENQRLVSQDNFG--LELAAVEAAVRKHEAIET 496 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae ++ a+ rv+a+++ + +L +e +d + I +r++++ + W+ L+++++ KIAA0302 497 DIVAYSGRVQAVDAVAAELAAE-RYHDIKRIAARQHNVARLWDFLRQMVA 545 eRrqkLe<-* +Rr++L KIAA0302 546 ARRERLL 552 SM00150: domain 3 of 17, from 558 to 662: score 100.4, E = 2.2e-25 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q+ ++d+ l++W+ee++ l+s+dlg ++l++ve+ll+ H+ ea KIAA0302 558 QKVFQDLLYLMDWMEEMKGRLQSQDLG--RHLAGVEDLLQLHELVEA 602 elaaheervdalnelgeqLiee...sghpdaeeIeerleelnerWeeLle ++a ++erv a+ + + ++++ ++++ + d + + er+++l++ +e+L+e KIAA0302 603 DIAVQAERVRAVSASALRFCNPgkeYRPCDPQLVSERVAKLEQSYEALCE 652 laeeRrqkLe<-* la++Rr++Le KIAA0302 653 LAAARRARLE 662 SM00150: domain 4 of 17, from 668 to 768: score 102.5, E = 4.7e-26 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea ++Fl+++ e+eaW++e++ ll+s d+g +Dl+++ +ll kH al+ KIAA0302 668 WRFLWEVGEAEAWVREQQHLLASADTG--RDLTGALRLLNKHTALRG 712 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e++ + ++ e+g+qL++e ghp a + +r +el+++We+L++lae KIAA0302 713 EMSGRLGPLKLTLEQGQQLVAE-GHPGASQASARAAELQAQWERLEALAE 761 eRrqkLe<-* eR q+L KIAA0302 762 ERAQRLA 768 SM00150: domain 5 of 17, from 774 to 873: score 86.8, E = 2.6e-21 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea +qF++da+++eaWl ++ +l+ss +lg +D+ s +al ++H ale+ KIAA0302 774 YQFQADANDMEAWLVDALRLVSSPELG--HDEFSTQALARQHRALEE 818 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e+ h++++dal e++ +L +e++ r+ l++++eeL+++a KIAA0302 819 EIRSHRPTLDALREQAAALPPT--LSRTPEVQGRVPTLERHYEELQARAG 866 eRrqkLe<-* eR ++Le KIAA0302 867 ERARALE 873 SM00150: domain 6 of 17, from 879 to 979: score 78.2, E = 9.9e-19 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea + l++a W+eekeq+l+ l+ le++e+ ++++++le KIAA0302 879 YTMLSEAGACGLWVEEKEQWLNGLALP--ERLEDLEVVQQRFETLEP 923 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e+++ ++++ a+n+ +eqL+++ ++p ++ I + +e+ln+rW++ ++la+ KIAA0302 924 EMNTLAAQITAVNDIAEQLLKA-NPPGKDRIVNTQEQLNHRWQQFRRLAD 972 eRrqkLe<-* ++++L KIAA0302 973 GKKAALT 979 SM00150: domain 7 of 17, from 985 to 1086: score 94.4, E = 1.4e-23 *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale q ++ ++ e+ aW++ek +++ s++ lg +Dl++v al++k+ e KIAA0302 985 QNYHLECTETQAWMREKTkVIESTQGLG--NDLAGVLALQRKLAGTE 1029 aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela ++l+a ++rv +l++++++L + ++++a +I +rl+e+++ We+L++ + KIAA0302 1030 RDLEAIAARVGELTREANALAAG-HPAQAVAINARLREVQTGWEDLRATM 1078 eeRrqkLe<-* ++R++ L KIAA0302 1079 RRREESLG 1086 SM00150: domain 8 of 17, from 1092 to 1193: score 82.6, E = 4.6e-20 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q Flr +d++ aWl+ ++++++se+ + +l+++eall +H al+ KIAA0302 1092 QDFLRSLDDFQAWLGRTQTAVASEEGP--ATLPEAEALLAQHAALRG 1136 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e++ + +++ l +lge+ +++ +p+ +++rle+l + WeeL +++e KIAA0302 1137 EVERAQSEYSRLRALGEEVTRDQADPQCLFLRQRLEALGTGWEELGRMWE 1186 eRrqkLe<-* R+ +L KIAA0302 1187 SRQGRLA 1193 SM00150: domain 9 of 17, from 1199 to 1299: score 87.0, E = 2.2e-21 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q Flrda+++e l+++e +ls+++++ ++l+++ a +kk+++++ KIAA0302 1199 QGFLRDARQAEGVLSSQEYVLSHTEMP--GTLQAADAAIKKLEDFMS 1243 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae ++a++er+ l e+g+qL++e g+ +a++I+e+ + +++r ++ +++a+ KIAA0302 1244 TMDANGERIHGLLEAGRQLVSE-GNIHADKIREKADSIERRHKKNQDAAQ 1292 eRrqkLe<-* + +L KIAA0302 1293 QFLGRLR 1299 SM00150: domain 10 of 17, from 1305 to 1404: score 81.2, E = 1.3e-19 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q+Fl+d+ el+ W++ek+ +++ + + ++ +++kHqa++a KIAA0302 1305 QHFLQDCHELKLWIDEKMLTAQDVSY---DEARNLHTKWQKHQAFMA 1348 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae elaa+++ +d+++++g++L e +++ ++ + e+l++l++rW+eL+ ++ KIAA0302 1349 ELAANKDWLDKVDKEGRELTLE-KPELKALVSEKLRDLHRRWDELETTTQ 1397 eRrqkLe<-* ++ + L KIAA0302 1398 AKARSLF 1404 SM00150: domain 11 of 17, from 1410 to 1509: score 94.3, E = 1.4e-23 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea + F + + le+Wle+ +++l s+d+g kDl+sv+ llkk+q le KIAA0302 1410 ELFAQSCCALESWLESLQAQLHSDDYG--KDLTSVNILLKKQQMLEW 1454 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e+a +e +v+a+++++++L +e + a e+e+ ++++e++++L++ ++ KIAA0302 1455 EMAVREKEVEAIQAQAKALAQE--DQGAGEVERTSRAVEEKFRALCQPMR 1502 eRrqkLe<-* eR ++L+ KIAA0302 1503 ERCRRLQ 1509 SM00150: domain 12 of 17, from 1515 to 1609: score 91.4, E = 1e-22 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea +qF+rd+++++ W++e +++ss+++g kDl+sv+ l+kk q+l++ KIAA0302 1515 HQFHRDVEDEILWVTERLPMASSMEHG--KDLPSVQLLMKKNQTLQK 1559 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e++ he+r+ +l e ++L ++ ++ +e+ e l+e W++L +e KIAA0302 1560 EIQGHEPRIADLRERQRALGAA---AAGPELAE----LQEMWKRLGHELE 1602 eRrqkLe<-* R+++Le KIAA0302 1603 LRGKRLE 1609 SM00150: domain 13 of 17, from 1615 to 1715: score 96.5, E = 3.1e-24 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea qqF+rda+e+eaW++e+e ++ ++ + kD+ s++a kkHq le+ KIAA0302 1615 QQFYRDAAEAEAWMGEQELHMMGQEKA--KDELSAQAEVKKHQVLEQ 1659 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae la +++++ +l + +++i+ +hp++ I r++++++ ++ L+ela KIAA0302 1660 ALADYAQTIHQLAASSQDMIDH-EHPESTRISIRQAQVDKLYAGLKELAG 1708 eRrqkLe<-* eRr++L+ KIAA0302 1709 ERRERLQ 1715 SM00150: domain 14 of 17, from 1721 to 1822: score 86.3, E = 3.6e-21 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q+ r++d+le+W++e e++++s +lg +D e+v l +k+ ++ + KIAA0302 1721 CQLRRELDDLEQWIQEREVVAASHELG--QDYEHVTMLRDKFREFSR 1765 el.aaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela + ++ +ervd+ n+l++ Li+ gh++ +++ e+ + lne+W++Llel+ KIAA0302 1766 DTsTIGQERVDSANALANGLIAG-GHAARATVAEWKDSLNEAWADLLELL 1814 eeRrqkLe<-* + R+q L KIAA0302 1815 DTRGQVLA 1822 SM00150: domain 15 of 17, from 1828 to 1928: score 83.2, E = 3.3e-20 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea q+Fl+ a++++a ++ k+q+l + +g +Dl ++eal+++H a e+ KIAA0302 1828 QRFLHGARQALARVQHKQQQL-PDGTG--RDLNAAEALQRRHCAYEH 1871 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae +++a ++v+++++ g +L +++ ++ aeeI ++++++ e+W++L+ ++ KIAA0302 1872 DIQALSPQVQQVQDDGHRLQKAYAGDKAEEIGRHMQAVAEAWAQLQGSSA 1921 eRrqkLe<-* +Rrq L KIAA0302 1922 ARRQLLL 1928 SM00150: domain 16 of 17, from 1934 to 2034: score 91.7, E = 8.8e-23 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea ++F+++++el+ W++e ++ ++ + +D++s+ +k +q ++a KIAA0302 1934 FRFFKAVRELMLWMDEVNLQMDAQERP--RDVSSADLVIKNQQGIKA 1978 elaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlelae e++a+++r+++++++g++L+++ +h++aeeI e+l +l++r++e e+++ KIAA0302 1979 EIEARADRFSSCIDMGKELLAR-SHYAAEEISEKLSQLQARRQETAEKWQ 2027 eRrqkLe<-* e+ +L+ KIAA0302 2028 EKMDWLQ 2034 SM00150: domain 17 of 17, from 2040 to 2280: score 35.4, E = 7.8e-06 *->qqFlrdadeleaWleekeqllssedlgeskDlesveallkkHqalea F rda +eaWl ++e+l+ s +lg ++++ve+l+k+H+a+++ KIAA0302 2040 LVFGRDAGMAEAWLCSQEPLVRSAELG--CTVDEVESLIKRHEAFQK 2084 elaaheervdalne.lgeqLieesghpdaeeIeerl.............. a+eer+ al++ ++ + e+ + + e eer+++++ ++++ + ++ KIAA0302 2085 SAVAWEERFCALEKlTALEEREK-ERKRKREEEERRkqppapeptasvpp 2133 .................................................. ++ ++++ ++++ ++++++++++++ ++ ++ ++++++++ ++++ + KIAA0302 2134 gdlvggqtasdttwdgtqprpppstqapsvngvctdgepsqpllgqqrle 2183 .................................................. +++ +++++++++++ ++++++++++++++ ++ ++++++++ + + + KIAA0302 2184 hssfpegpgpgsgdeangprgerqtrtrgpapsampqsrstesahaatlp 2233 ...........................eelnerWeeLlelaeeRrqkLe< +++++++ +++ ++ ++++ + ++++ n+ W+ + Rr L KIAA0302 2234 prgpepsaqeqmegmlcrkqemeafgkKAANRSWQ--NVYCVLRRGSLG 2280 -* KIAA0302 - - SM00233: domain 1 of 1, from 2243 to 2354: score 64.3, E = 1.5e-14 *->vikeGwLlkks..........k.swkkryfvLfngvLlyyksk.... ++eG L +k +++ ++sw+ +y+vL++g+L +yk+ + + KIAA0302 2243 EQMEGMLCRKQemeafgkkaaNrSWQNVYCVLRRGSLGFYKDAkaas 2289 ...kpkgsipLsgcsvre.p.........cFeivt.dr.tlllqAeseee + + g++p+s ++ + ++ + ++++++F++ +d++++l+qA++e e KIAA0302 2290 agvPYHGEVPVSLARAQGsVafdyrkrkhVFKLGLqDGkEYLFQAKDEAE 2339 reeWvealqsaiaka<-* + +W++ ++aia a KIAA0302 2340 MSSWLRVVNAAIATA 2354 //