hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22565327/chunk_1/iprscan-20080501-22565327.nocrc
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Query sequence: KIAA0299
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF06920.3.ls Dedicator of cytokinesis                        10.1    2.5e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF06920.3.ls   1/1    1320  1507 ..     1   190 []    10.1  2.5e-08

Alignments of top-scoring domains:
PF06920.3.ls: domain 1 of 1, from 1320 to 1507: score 10.1, E = 2.5e-08
                   *->TyFernhnlrRFmFeTPFTktGraq.GeleEQfKRkTILttensFPy
                        F r +n+r F ++ PF k  + ++ e    +  +T Lt  +s P 
    KIAA0299  1320    KSFYRVNNVRKFRYDRPFHKGPKDKeNEFKSLWIERTTLTLTHSLPG 1366 

                   iktRilViskeeieLsPIEVAIediqKKtaeLaaainqppssEGDqLpdl
                   i     V  +e  e sP E+AI   + K++eL+ +i+q           +
    KIAA0299  1367 ISRWFEVERRELVEVSPLENAIQVVENKNQELRSLISQYQ--HKQVHGNI 1414 

                   KmLQmvLQGSVgvtVNaGPLevAraFLanepadrlGrPpdrhvnkLrlvF
                     L+m L G + + VN G   +  aF +    +      + ++ +L++  
    KIAA0299  1415 NLLSMCLNGVIDAAVNGGIARYQEAFFDKDYINKH-PGDAEKITQLKELM 1463 

                   reFikrCkrALevNkrLIgeDQkEYqreLeeNYekLkeeLsplI<-*
                    e + + +  L+v++    ++ +  ++ L   ++ +++ L +     
    KIAA0299  1464 QEQVHVLGVGLAVHEKFVHPEMRPLHKKLIDQFQMMRASLYHEF    1507 

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