hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22414945/chunk_1/iprscan-20080501-22414945.nocrc
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Query sequence: KIAA0290
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00055                                                  93.4    2.7e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00055    1/1      23   109 ..     1   103 []    93.4  2.7e-23

Alignments of top-scoring domains:
SM00055: domain 1 of 1, from 23 to 109: score 93.4, E = 2.7e-23
                   *->mgfwselwsddGfeaLlsrlknglrlledlkkflreRakiEeeYAkk
                       +fw+e   ++Gfe+L++ +k+g  + ++l+ f+reRa+iEe Y+k 
    KIAA0290    23    EHFWGEK--NHGFEVLYHSVKQGPISTKELADFIRERATIEETYSKA 67   

                   Lqklskkyfnkkssvgdlravreteselgslkkswevllsetdalakshl
                   ++klsk               +++++++g++   wev++ + d+la +hl
    KIAA0290    68 MAKLSKL--------------ASNGTPMGTFAPLWEVFRVSSDKLALCHL 103  

                   qlsedL<-*
                   +l+ +L   
    KIAA0290   104 ELTRKL    109  

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