# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha06634.fasta.nr -Q ../query/KIAA0278.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0278, 460 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7818851 sequences Expectation_n fit: rho(ln(x))= 5.8847+/-0.000197; mu= 9.4535+/- 0.011 mean_var=108.9620+/-22.104, 0's: 28 Z-trim: 34 B-trim: 6554 in 2/63 Lambda= 0.122867 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|109087648|ref|XP_001090976.1| PREDICTED: simila ( 489) 3038 549.0 9.6e-154 gi|74738627|sp|Q7LC44.1|ARC_HUMAN RecName: Full=Ac ( 396) 2743 496.6 4.5e-138 gi|81882082|sp|Q9WV31.1|ARC_MOUSE RecName: Full=Ac ( 396) 2538 460.3 3.9e-127 gi|81863214|sp|Q63053.1|ARC_RAT RecName: Full=Acti ( 396) 2528 458.5 1.3e-126 gi|644829|gb|AAA68695.1| growth factor gi|9506 ( 396) 2524 457.8 2.2e-126 gi|119922443|ref|XP_597621.3| PREDICTED: similar t ( 396) 2507 454.8 1.8e-125 gi|126322377|ref|XP_001370970.1| PREDICTED: simila ( 400) 2234 406.4 6.6e-111 gi|194215148|ref|XP_001917044.1| PREDICTED: simila ( 392) 2083 379.6 7.5e-103 gi|149410164|ref|XP_001512750.1| PREDICTED: simila ( 401) 2070 377.3 3.7e-102 gi|82100500|sp|Q8AWC3.1|ARC_CHICK RecName: Full=Ac ( 404) 1871 342.1 1.6e-91 gi|9966423|gb|AAG10254.1| ARC [Mus musculus] ( 242) 1574 289.2 7.6e-76 gi|114622029|ref|XP_528245.2| PREDICTED: activity- ( 625) 1491 274.9 4.1e-71 gi|119602727|gb|EAW82321.1| activity-regulated cyt ( 362) 1465 270.0 6.7e-70 gi|119602726|gb|EAW82320.1| activity-regulated cyt ( 360) 1461 269.3 1.1e-69 gi|117671280|gb|ABK56827.1| activity-regulated cyt ( 216) 1090 203.4 4.7e-50 gi|55710027|gb|AAV58856.1| activity-regulated cyto ( 132) 541 105.9 6.5e-21 gi|183206338|gb|ACC54426.1| activity-regulated cyt ( 197) 372 76.1 9e-12 gi|222778469|gb|ACM67355.1| activity-regulated cyt ( 197) 366 75.0 1.9e-11 gi|78708038|gb|ABB47013.1| retrotransposon protein (1475) 221 50.1 0.0044 gi|189531845|ref|XP_001921717.1| PREDICTED: simila (1309) 217 49.3 0.0066 >>gi|109087648|ref|XP_001090976.1| PREDICTED: similar to (489 aa) initn: 3040 init1: 2806 opt: 3038 Z-score: 2916.4 bits: 549.0 E(): 9.6e-154 Smith-Waterman score: 3038; 95.207% identity (98.039% similar) in 459 aa overlap (5-460:31-489) 10 20 30 KIAA02 GRVGRSSRAGPASPGVLRRPRRRPAATDRRSPQL :::::::::::.:..::::::::::::::: gi|109 MGYLTLPCRTLSLRAGGRDSAQSSGAASSLRSSRAGPASPGALHQPRRRPAATDRRSPQL 10 20 30 40 50 60 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAG---PPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVAKPNV .:::::: .:: :::::::::.:: ::::::::::::::::::::::::: .::::: gi|109 HTGPRPPGTAAGLQRPPSVRPEEFVACPSTCAQMELDHRTSGGLHAYPGPRGGPAAKPNV 70 80 90 100 110 120 100 110 120 130 140 150 KIAA02 ILQIGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRW :::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::: gi|109 ILQIGKCRAEMLEHVRRTHRHLLTEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRW 130 140 150 160 170 180 160 170 180 190 200 210 KIAA02 KKSIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|109 KKSIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSEPARHT 190 200 210 220 230 240 220 230 240 250 260 270 KIAA02 VSVGVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VSVGVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSP 250 260 270 280 290 300 280 290 300 310 320 330 KIAA02 GVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEF 310 320 330 340 350 360 340 350 360 370 380 390 KIAA02 KKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVG :.::::::::.:::::.::::::::::::::::::::::::::::::::::::::::::: gi|109 KREFLQYSEGALSREAVQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVG 370 380 390 400 410 420 400 410 420 430 440 450 KIAA02 TLQPKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSES ::::::::::::::::::::::::::::::::::::::: ::.:.::::::::::::::: gi|109 TLQPKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAVPHVPAEDEAETLTPAPNSES 430 440 450 460 470 480 460 KIAA02 VASDRTQPE ::::::::: gi|109 VASDRTQPE >>gi|74738627|sp|Q7LC44.1|ARC_HUMAN RecName: Full=Activi (396 aa) initn: 2743 init1: 2743 opt: 2743 Z-score: 2635.0 bits: 496.6 E(): 4.5e-138 Smith-Waterman score: 2743; 100.000% identity (100.000% similar) in 396 aa overlap (65-460:1-396) 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVAKPNVILQ :::::::::::::::::::::::::::::: gi|747 MELDHRTSGGLHAYPGPRGGQVAKPNVILQ 10 20 30 100 110 120 130 140 150 KIAA02 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS 40 50 60 70 80 90 160 170 180 190 200 210 KIAA02 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSV 100 110 120 130 140 150 220 230 240 250 260 270 KIAA02 GVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSPGVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 GVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSPGVD 160 170 180 190 200 210 280 290 300 310 320 330 KIAA02 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE 220 230 240 250 260 270 340 350 360 370 380 390 KIAA02 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQ 280 290 300 310 320 330 400 410 420 430 440 450 KIAA02 PKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSESVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 PKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSESVAS 340 350 360 370 380 390 460 KIAA02 DRTQPE :::::: gi|747 DRTQPE >>gi|81882082|sp|Q9WV31.1|ARC_MOUSE RecName: Full=Activi (396 aa) initn: 2538 init1: 2538 opt: 2538 Z-score: 2438.6 bits: 460.3 E(): 3.9e-127 Smith-Waterman score: 2538; 92.929% identity (96.717% similar) in 396 aa overlap (65-460:1-396) 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVAKPNVILQ ::::: :.:::::::.:::: .:::::::: gi|818 MELDHMTTGGLHAYPAPRGGPAAKPNVILQ 10 20 30 100 110 120 130 140 150 KIAA02 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS ::::::::::::::::::::.:::::::::::::::::::::.::::::::.:::::::: gi|818 IGKCRAEMLEHVRRTHRHLLTEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKS 40 50 60 70 80 90 160 170 180 190 200 210 KIAA02 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSV :::::::::::::::::::::::::::::::::::::::::: ::::::::: ::::::: gi|818 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSV 100 110 120 130 140 150 220 230 240 250 260 270 KIAA02 GVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSPGVD :::::: ::.:::::::::::::::::::::::: :: .:::::: : :::::::::::: gi|818 GVGGPEPYCQEADGYDYTVSPYAITPPPAAGELPEQESVEAQQYQSWGPGEDGQPSPGVD 160 170 180 190 200 210 280 290 300 310 320 330 KIAA02 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE 220 230 240 250 260 270 340 350 360 370 380 390 KIAA02 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQ ::::::::::::::::::.:::::::::::::::::::::::::::.::::::::::::: gi|818 FLQYSEGTLSREAIQRELELPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQ 280 290 300 310 320 330 400 410 420 430 440 450 KIAA02 PKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSESVAS ::::::::::::::::::::::::::: :::::::.: ::.:::.:.:::: .:::::: gi|818 PKLKRFLRHPLPKTLEQLIQRGMEVQDGLEQAAEPSGTPLPTEDETEALTPALTSESVAS 340 350 360 370 380 390 460 KIAA02 DRTQPE :::::: gi|818 DRTQPE >>gi|81863214|sp|Q63053.1|ARC_RAT RecName: Full=Activity (396 aa) initn: 2528 init1: 2528 opt: 2528 Z-score: 2429.0 bits: 458.5 E(): 1.3e-126 Smith-Waterman score: 2528; 92.677% identity (96.465% similar) in 396 aa overlap (65-460:1-396) 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVAKPNVILQ ::::: :.:::::::.:::: .:::::::: gi|818 MELDHMTTGGLHAYPAPRGGPAAKPNVILQ 10 20 30 100 110 120 130 140 150 KIAA02 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS ::::::::::::::::::::.:::::::::::::::::::::.::::::::.:::::::: gi|818 IGKCRAEMLEHVRRTHRHLLTEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKS 40 50 60 70 80 90 160 170 180 190 200 210 KIAA02 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSV :::::::::::::::::::::::::::::::::::::::::: ::::::::: ::::::: gi|818 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSV 100 110 120 130 140 150 220 230 240 250 260 270 KIAA02 GVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSPGVD :::::: ::.:::::::::::::::::::::::: :: . ::::: :::::::::::::: gi|818 GVGGPEPYCQEADGYDYTVSPYAITPPPAAGELPEQESVGAQQYQSWVPGEDGQPSPGVD 160 170 180 190 200 210 280 290 300 310 320 330 KIAA02 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|818 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE 220 230 240 250 260 270 340 350 360 370 380 390 KIAA02 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|818 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQ 280 290 300 310 320 330 400 410 420 430 440 450 KIAA02 PKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSESVAS ::.:::::::::::::::::::::::: :::::::. ::.:::.:.:::: .:::::: gi|818 PKFKRFLRHPLPKTLEQLIQRGMEVQDGLEQAAEPSVTPLPTEDETEALTPALTSESVAS 340 350 360 370 380 390 460 KIAA02 DRTQPE :::::: gi|818 DRTQPE >>gi|644829|gb|AAA68695.1| growth factor gi|9506397| (396 aa) initn: 2524 init1: 2524 opt: 2524 Z-score: 2425.2 bits: 457.8 E(): 2.2e-126 Smith-Waterman score: 2524; 92.424% identity (96.465% similar) in 396 aa overlap (65-460:1-396) 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVAKPNVILQ ::::: :.:::::::.:::: .:::::::: gi|644 MELDHMTTGGLHAYPAPRGGPAAKPNVILQ 10 20 30 100 110 120 130 140 150 KIAA02 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS ::::::::::::::::::::.:::::::::::::::::::::.::::::::.:::::::: gi|644 IGKCRAEMLEHVRRTHRHLLTEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKS 40 50 60 70 80 90 160 170 180 190 200 210 KIAA02 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSV :::::::::::::::::::::::::::::::::::::::::: ::::::::: ::::::: gi|644 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESMGGKYPVGSEPARHTVSV 100 110 120 130 140 150 220 230 240 250 260 270 KIAA02 GVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSPGVD :::::: ::.:::::::::::::::::::::::: :: . ::::: ::::::::::::.: gi|644 GVGGPEPYCQEADGYDYTVSPYAITPPPAAGELPEQESVGAQQYQSWVPGEDGQPSPGLD 160 170 180 190 200 210 280 290 300 310 320 330 KIAA02 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|644 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE 220 230 240 250 260 270 340 350 360 370 380 390 KIAA02 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|644 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQ 280 290 300 310 320 330 400 410 420 430 440 450 KIAA02 PKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSESVAS ::.:::::::::::::::::::::::: :::::::. ::.:::.:.:::: .:::::: gi|644 PKFKRFLRHPLPKTLEQLIQRGMEVQDGLEQAAEPSVTPLPTEDETEALTPALTSESVAS 340 350 360 370 380 390 460 KIAA02 DRTQPE :::::: gi|644 DRTQPE >>gi|119922443|ref|XP_597621.3| PREDICTED: similar to ac (396 aa) initn: 2507 init1: 2507 opt: 2507 Z-score: 2408.9 bits: 454.8 E(): 1.8e-125 Smith-Waterman score: 2507; 91.667% identity (96.465% similar) in 396 aa overlap (65-460:1-396) 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVAKPNVILQ :::::::.::::::::::.: .:::::::: gi|119 MELDHRTTGGLHAYPGPRSGPAAKPNVILQ 10 20 30 100 110 120 130 140 150 KIAA02 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS 40 50 60 70 80 90 160 170 180 190 200 210 KIAA02 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSV ::::: :::::::::::::::::::::::::::::::::::: ::::::::. ::::::: gi|119 IKACLSRCQETIANLERWVKREMHVWREVFYRLERWADRLESGGGKYPVGSDPARHTVSV 100 110 120 130 140 150 220 230 240 250 260 270 KIAA02 GVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSPGVD ::::::.::.:::.::::::::::: :::::.::::: .::::: :: :::::: ::::: gi|119 GVGGPEGYCQEADNYDYTVSPYAITSPPAAGQLPGQEEVEAQQYPPWGPGEDGQLSPGVD 160 170 180 190 200 210 280 290 300 310 320 330 KIAA02 TQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE ::.::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|119 TQVFEDPREFLSHLEDYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEFKKE 220 230 240 250 260 270 340 350 360 370 380 390 KIAA02 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVGTLQ ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|119 FLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDAEEEEIIQYVVGTLQ 280 290 300 310 320 330 400 410 420 430 440 450 KIAA02 PKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPNSESVAS :::::::: :::::::::::.:::::: :: ::::.::: :.:.:::.:::: ..::::: gi|119 PKLKRFLRPPLPKTLEQLIQKGMEVQDGLEPAAEPTGPHPPAEEEAESLTPALTNESVAS 340 350 360 370 380 390 460 KIAA02 DRTQPE :::::: gi|119 DRTQPE >>gi|126322377|ref|XP_001370970.1| PREDICTED: similar to (400 aa) initn: 2266 init1: 1085 opt: 2234 Z-score: 2147.3 bits: 406.4 E(): 6.6e-111 Smith-Waterman score: 2234; 82.338% identity (91.294% similar) in 402 aa overlap (65-460:1-400) 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVAKPNVILQ :::.: .:::::.: ::::: .:::::::: gi|126 MELEHLSSGGLHTYHGPRGGPAAKPNVILQ 10 20 30 100 110 120 130 140 150 KIAA02 IGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKKS :::::::::::::.::::::.:::::::::::::::::::::.::::::::.:::::::: gi|126 IGKCRAEMLEHVRKTHRHLLTEVSKQVERELKGLHRSVGKLENNLDGYVPTGDSQRWKKS 40 50 60 70 80 90 160 170 180 190 200 210 KIAA02 IKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVSV ::::: :::::::.:::::::::.::::::::::.::::::: ::::::..: .:.:::: gi|126 IKACLSRCQETIAHLERWVKREMNVWREVFYRLEKWADRLESMGGKYPVSGEPTRQTVSV 100 110 120 130 140 150 220 230 240 250 260 KIAA02 GVGGPESYCHEADGYDYTVSPYAITPP-P----AAGELPGQEPAEAQQYQPWVPG-EDGQ :::::::::.:.: ::::::::::::: : :.:: ..::.: ::: :: ::: gi|126 GVGGPESYCQETDPYDYTVSPYAITPPTPVGVTAGGEALSHEPSEIQQYPPWSSTTEDGT 160 170 180 190 200 210 270 280 290 300 310 320 KIAA02 PSPGVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNW :::::::::::::::::::::::.::::.:::::::::::::::::::::.:::::::: gi|126 LSPGVDTQIFEDPREFLSHLEEYLKQVGGTEEYWLSQIQNHMNGPAKKWWEYKQGSVKNW 220 230 240 250 260 270 330 340 350 360 370 380 KIAA02 VEFKKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQY :::::::::::::::.:.::.::::::::::::::::::::::::::::::::::::::: gi|126 VEFKKEFLQYSEGTLTRDAIKRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQY 280 290 300 310 320 330 390 400 410 420 430 440 KIAA02 VVGTLQPKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPAPN ::::::::::.:::::::::::::::::.:::. :::. .: . ::. :.:::: gi|126 VVGTLQPKLKHFLRHPLPKTLEQLIQRGQEVQEGLEQGEDPIEQQTQSEDNDESLTPA-- 340 350 360 370 380 450 460 KIAA02 SESVASDRTQPE ::.::: :::: gi|126 MESLASDGTQPE 390 400 >>gi|194215148|ref|XP_001917044.1| PREDICTED: similar to (392 aa) initn: 2008 init1: 1885 opt: 2083 Z-score: 2002.8 bits: 379.6 E(): 7.5e-103 Smith-Waterman score: 2083; 90.029% identity (95.308% similar) in 341 aa overlap (122-460:55-392) 100 110 120 130 140 150 KIAA02 ILQIGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRW ::::.: ::: .:: :::::::: .::::: gi|194 RAAPDSGDGEGVVVVEVMVVAVRCHGTNGAERELNGQHRS-SKLXSNLDGYVP-GDSQRW 30 40 50 60 70 80 160 170 180 190 200 210 KIAA02 KKSIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHT : :::::::::::::::::::::::::::::.::::::::::::. :.:: :::: ::.: gi|194 K-SIKACLCRCQETIANLERWVKREMHVWREIFYRLERWADRLEAMGSKYQVGSEPARQT 90 100 110 120 130 140 220 230 240 250 260 270 KIAA02 VSVGVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPSP :::::::::.::..::.::::::::::: ::::::::::::.::::: :: :::::: :: gi|194 VSVGVGGPENYCQDADAYDYTVSPYAITSPPAAGELPGQEPVEAQQYPPWGPGEDGQLSP 150 160 170 180 190 200 280 290 300 310 320 330 KIAA02 GVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVEF 210 220 230 240 250 260 340 350 360 370 380 390 KIAA02 KKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVVG 270 280 290 300 310 320 400 410 420 430 440 KIAA02 TLQPKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDE--AETLTPAPNS :::::::::::::::::::::::::::::: ::::::::::.::.::: ::..::: .. gi|194 TLQPKLKRFLRHPLPKTLEQLIQRGMEVQDGLEQAAEPAGPRLPTEDEGEAESVTPALTN 330 340 350 360 370 380 450 460 KIAA02 ESVASDRTQPE ::::::::::: gi|194 ESVASDRTQPE 390 >>gi|149410164|ref|XP_001512750.1| PREDICTED: similar to (401 aa) initn: 1905 init1: 1092 opt: 2070 Z-score: 1990.2 bits: 377.3 E(): 3.7e-102 Smith-Waterman score: 2070; 76.238% identity (87.871% similar) in 404 aa overlap (65-460:1-401) 40 50 60 70 80 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDH-------RTSGGLHAYPGPRGGQVA ::::. . :.::: ::: ::: .: gi|149 MELDRLNPSSGLHPSSGLHPYPGLRGGATA 10 20 30 90 100 110 120 130 140 KIAA02 KPNVILQIGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSD ::::::::::::::::::::.::::::.:::.::::::::::.::::::::::::::.:: gi|149 KPNVILQIGKCRAEMLEHVRKTHRHLLTEVSRQVERELKGLHKSVGKLESNLDGYVPSSD 40 50 60 70 80 90 150 160 170 180 190 200 KIAA02 SQRWKKSIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSES :::::::::::: :::::::.:::::::::.:::::::::::::::::. :::::.: :. gi|149 SQRWKKSIKACLSRCQETIAHLERWVKREMNVWREVFYRLERWADRLEAMGGKYPAG-EQ 100 110 120 130 140 210 220 230 240 250 260 KIAA02 ARHTVSVGVGGPESYCHEADGYDYTVSPYAITPPPAAGELPGQEPAEAQQYQPWVPGEDG ::.::::::::::. : ..:: .::::. ::..:: : . :.:: : . gi|149 ARRTVSVGVGGPETCCPGDESYDCPISPYAV--PPSTGESPESLDQGDQHYQQWFALPEE 150 160 170 180 190 200 270 280 290 300 310 320 KIAA02 QP-SPGVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVK .: :::::::::::::::: :::.::.::::.:: ::::::::::::::::::.:::::: gi|149 SPVSPGVDTQIFEDPREFLRHLEKYLKQVGGTEEDWLSQIQNHMNGPAKKWWEYKQGSVK 210 220 230 240 250 260 330 340 350 360 370 380 KIAA02 NWVEFKKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEII ::.::::::::::::::.:.:..::::::::::::::::::::::::::::::::::::: gi|149 NWLEFKKEFLQYSEGTLTRDALKRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEII 270 280 290 300 310 320 390 400 410 420 430 440 KIAA02 QYVVGTLQPKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAGPHLPVEDEAETLTPA :::::::::::::::.::::::::::::::.:::. :: . .::: . ::. :.:::: gi|149 QYVVGTLQPKLKRFLHHPLPKTLEQLIQRGQEVQNGLEPTDDPAGQRTQSEDNDESLTPA 330 340 350 360 370 380 450 460 KIAA02 PNSESVASDRTQPE ..::.::. : :: gi|149 VTNESTASEGTLPE 390 400 >>gi|82100500|sp|Q8AWC3.1|ARC_CHICK RecName: Full=Activi (404 aa) initn: 1460 init1: 990 opt: 1871 Z-score: 1799.5 bits: 342.1 E(): 1.6e-91 Smith-Waterman score: 1871; 70.968% identity (85.608% similar) in 403 aa overlap (65-460:1-395) 40 50 60 70 80 90 KIAA02 RTGPRPPDPSAGPPSVRPEEFAACRSTCAQMELDHRTSGGLHAYPGPRGGQVA-KPNVIL :.::. :..:.:.. : :: :: :::::: gi|821 MQLDNVTNAGIHSFQGHRG--VANKPNVIL 10 20 100 110 120 130 140 150 KIAA02 QIGKCRAEMLEHVRRTHRHLLAEVSKQVERELKGLHRSVGKLESNLDGYVPTSDSQRWKK :::::::::::::::::::::.:::::::::::::..::::::.::. .::: :.::::: gi|821 QIGKCRAEMLEHVRRTHRHLLSEVSKQVERELKGLQKSVGKLENNLEDHVPT-DNQRWKK 30 40 50 60 70 80 160 170 180 190 200 210 KIAA02 SIKACLCRCQETIANLERWVKREMHVWREVFYRLERWADRLESTGGKYPVGSESARHTVS :::::: :::::::.:::::::::.::.:::.:::.::::::: :::: : : ...::: gi|821 SIKACLARCQETIAHLERWVKREMNVWKEVFFRLEKWADRLESMGGKYCPG-EHGKQTVS 90 100 110 120 130 140 220 230 240 250 260 270 KIAA02 VGVGGPESYCHEADGYDYTVSP---YAITPPPAAGELPGQEPAEAQQYQPWVPGEDGQPS ::::::: :.. :::... ::.:: : ::.:. : ..:: :: . :. gi|821 VGVGGPEIRPSEGEIYDYALDMSQMYALTPAP--GEVPSI-PQAHDSYQ-WVSVSEDAPA 150 160 170 180 190 200 280 290 300 310 320 330 KIAA02 PGVDTQIFEDPREFLSHLEEYLRQVGGSEEYWLSQIQNHMNGPAKKWWEFKQGSVKNWVE :.:::::::.::::::::::.::::.:::::::::::::::::::::.:: ::::::: gi|821 SPVETQIFEDPHEFLSHLEEYLKQVGGTEEYWLSQIQNHMNGPAKKWWEYKQDSVKNWVE 210 220 230 240 250 260 340 350 360 370 380 390 KIAA02 FKKEFLQYSEGTLSREAIQRELDLPQKQGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVV :::::::::::::.:.::.::::::::.:::::::::::::::::::::::::::::::: gi|821 FKKEFLQYSEGTLTRDAIKRELDLPQKEGEPLDQFLWRKRDLYQTLYVDADEEEIIQYVV 270 280 290 300 310 320 400 410 420 430 440 KIAA02 GTLQPKLKRFLRHPLPKTLEQLIQRGMEVQDDLEQAAEPAG---PHLPVEDEAETLTPAP ::::::::::: .::::::::::::: ::: ..... ::. :.. : .:.. :. gi|821 GTLQPKLKRFLSYPLPKTLEQLIQRGKEVQGNMDHSEEPSPQRTPEIQSGDSVESMPPST 330 340 350 360 370 380 450 460 KIAA02 NSESVASDRTQPE .. : :. :::: gi|821 TASPVPSNGTQPEPPSPPATVI 390 400 460 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 09:36:12 2009 done: Wed Mar 4 09:40:43 2009 Total Scan time: 1537.570 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]