hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22080221/chunk_1/iprscan-20080501-22080221.nocrc
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Query sequence: KIAA0271
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00337                                                 166.7    2.3e-45   1
SM00265                                                  52.1    7.3e-11   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00265    1/1      15    41 ..     1    27 []    52.1  7.3e-11
SM00337    1/1      55   153 ..     1   120 []   166.7  2.3e-45

Alignments of top-scoring domains:
SM00265: domain 1 of 1, from 15 to 41: score 52.1, E = 7.3e-11
                   *->srldsReLVvDfvsYKLsQnGyeweag<-*
                      s +d+R+LV+Dfv+YKL+Q+Gy+++ag   
    KIAA0271    15    SAPDTRALVADFVGYKLRQKGYVCGAG    41   

SM00337: domain 1 of 1, from 55 to 153: score 166.7, E = 2.3e-45
                   *->LrrvgdelenkryerafssfsaqlhvsvatpetaielfteVatelfe
                      +r++gde+e  r++r+fs+++aqlhv   tp++a+++ft+V +elf+
    KIAA0271    55    MRAAGDEFE-TRFRRTFSDLAAQLHV---TPGSAQQRFTQVSDELFQ 97   

                   dGqPCniNWGRvVallsFggaLalklvnsqikeledlvsrlasfrvesll
                    G     NWGR+Va+++Fg+aL++++vn   ke+e+lv++++++     +
    KIAA0271    98 GG----PNWGRLVAFFVFGAALCAESVN---KEMEPLVGQVQEW-----M 135  

                   veflketlgeRfpaeWlrenGGW<-*
                   v++l+++l     a+W+++ GGW   
    KIAA0271   136 VAYLETRL-----ADWIHSSGGW    153  

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