hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22080221/chunk_1/iprscan-20080501-22080221.nocrc
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Query sequence: KIAA0271
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00452.10.fs Apoptosis regulator proteins, Bcl-2 family     189.5    1.6e-78   1
PF00452.10.ls Apoptosis regulator proteins, Bcl-2 family     191.5    1.9e-54   1
PF02180.8.fs Bcl-2 homology region 4                         50.1    7.2e-14   1
PF02180.8.ls Bcl-2 homology region 4                         52.1    1.7e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02180.8.fs   1/1      15    41 ..     1    27 []    50.1  7.2e-14
PF02180.8.ls   1/1      15    41 ..     1    27 []    52.1  1.7e-12
PF00452.10.fs   1/1      55   153 ..     1   107 []   189.5  1.6e-78
PF00452.10.ls   1/1      55   153 ..     1   107 []   191.5  1.9e-54

Alignments of top-scoring domains:
PF02180.8.fs: domain 1 of 1, from 15 to 41: score 50.1, E = 7.2e-14
                   *->srldsReLVvDfvsYKLsQnGyeweag<-*
                      s +d+R+LV+Dfv+YKL+Q+Gy+++ag   
    KIAA0271    15    SAPDTRALVADFVGYKLRQKGYVCGAG    41   

PF02180.8.ls: domain 1 of 1, from 15 to 41: score 52.1, E = 1.7e-12
                   *->srldsReLVvDfvsYKLsQnGyeweag<-*
                      s +d+R+LV+Dfv+YKL+Q+Gy+++ag   
    KIAA0271    15    SAPDTRALVADFVGYKLRQKGYVCGAG    41   

PF00452.10.fs: domain 1 of 1, from 55 to 153: score 189.5, E = 1.6e-78
                   *->LrraGdelekrveraFssmsrqlhitpetArelFtqVaeelFeDGgi
                      +r+aGde+e r++r+Fs+++ qlh+tp+ A+++FtqV +elF++ g 
    KIAA0271    55    MRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQG-GP 100  

                   PCPmNWGRiVaLfsFggaLaaklvekemeDVelvsriadwvveFlkenil
                       NWGR+Va+f+Fg+aL+a++v+keme  +lv+++++w+v++l+++ l
    KIAA0271   101 ----NWGRLVAFFVFGAALCAESVNKEME--PLVGQVQEWMVAYLETR-L 143  

                   aeWiqenGGW<-*
                   a+Wi++ GGW   
    KIAA0271   144 ADWIHSSGGW    153  

PF00452.10.ls: domain 1 of 1, from 55 to 153: score 191.5, E = 1.9e-54
                   *->LrraGdelekrveraFssmsrqlhitpetArelFtqVaeelFeDGgi
                      +r+aGde+e r++r+Fs+++ qlh+tp+ A+++FtqV +elF++ g 
    KIAA0271    55    MRAAGDEFETRFRRTFSDLAAQLHVTPGSAQQRFTQVSDELFQG-GP 100  

                   PCPmNWGRiVaLfsFggaLaaklvekemeDVelvsriadwvveFlkenil
                       NWGR+Va+f+Fg+aL+a++v+keme  +lv+++++w+v++l+++ l
    KIAA0271   101 ----NWGRLVAFFVFGAALCAESVNKEME--PLVGQVQEWMVAYLETR-L 143  

                   aeWiqenGGW<-*
                   a+Wi++ GGW   
    KIAA0271   144 ADWIHSSGGW    153  

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