hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-22045074/chunk_1/iprscan-20080501-22045074.nocrc
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Query sequence: KIAA0269
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00246                                                  32.1    7.8e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00246    1/1     505   522 ..     1    19 []    32.1  7.8e-05

Alignments of top-scoring domains:
SM00246: domain 1 of 1, from 505 to 522: score 32.1, E = 7.8e-05
                   *->aRsaLLaqIrgqGkkLKKv<-*
                      aRs LL++Ir +G++L+Kv   
    KIAA0269   505    ARSVLLEAIR-KGIQLRKV    522  

//