# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha07040.fasta.nr -Q ../query/KIAA0264.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0264, 415 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826294 sequences Expectation_n fit: rho(ln(x))= 5.4819+/-0.000184; mu= 9.0299+/- 0.010 mean_var=79.7777+/-15.330, 0's: 47 Z-trim: 55 B-trim: 0 in 0/65 Lambda= 0.143593 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|168267252|dbj|BAG09682.1| mitochondrial 28S rib ( 414) 2698 568.4 1e-159 gi|209572725|sp|Q92552.3|RT27_HUMAN RecName: Full= ( 414) 2689 566.6 3.8e-159 gi|55732098|emb|CAH92755.1| hypothetical protein [ ( 414) 2673 563.3 3.7e-158 gi|109077545|ref|XP_001098829.1| PREDICTED: simila ( 414) 2552 538.2 1.3e-150 gi|114599745|ref|XP_001154270.1| PREDICTED: mitoch ( 388) 2368 500.0 3.7e-139 gi|114599749|ref|XP_001154328.1| PREDICTED: mitoch ( 358) 2335 493.2 4e-137 gi|119616108|gb|EAW95702.1| mitochondrial ribosoma ( 358) 2326 491.3 1.5e-136 gi|194390288|dbj|BAG61906.1| unnamed protein produ ( 358) 2314 488.8 8.2e-136 gi|55728852|emb|CAH91164.1| hypothetical protein [ ( 358) 2314 488.8 8.2e-136 gi|118573855|sp|Q32PI8.1|RT27_BOVIN RecName: Full= ( 415) 2252 476.0 6.7e-132 gi|109077547|ref|XP_001098623.1| PREDICTED: simila ( 388) 2245 474.6 1.7e-131 gi|73950170|ref|XP_852973.1| PREDICTED: similar to ( 452) 2229 471.3 2e-130 gi|109077549|ref|XP_001098529.1| PREDICTED: simila ( 358) 2212 467.7 1.9e-129 gi|149059161|gb|EDM10168.1| mitochondrial ribosoma ( 415) 2149 454.7 1.8e-125 gi|148668513|gb|EDL00832.1| mitochondrial ribosoma ( 415) 2117 448.1 1.8e-123 gi|50980303|ref|NP_776118.2| mitochondrial ribosom ( 415) 2107 446.0 7.4e-123 gi|81874048|sp|Q8BK72.1|RT27_MOUSE RecName: Full=2 ( 415) 2101 444.8 1.8e-122 gi|194220153|ref|XP_001504081.2| PREDICTED: simila ( 415) 2099 444.3 2.3e-122 gi|194387962|dbj|BAG61394.1| unnamed protein produ ( 428) 2091 442.7 7.6e-122 gi|126320580|ref|XP_001363041.1| PREDICTED: hypoth ( 416) 1932 409.7 6.1e-112 gi|114599743|ref|XP_001154560.1| PREDICTED: mitoch ( 436) 1861 395.1 1.7e-107 gi|114599747|ref|XP_001154505.1| PREDICTED: mitoch ( 363) 1783 378.8 1.1e-102 gi|149408537|ref|XP_001512710.1| PREDICTED: hypoth ( 457) 1782 378.7 1.5e-102 gi|50761690|ref|XP_424803.1| PREDICTED: hypothetic ( 407) 1755 373.1 6.5e-101 gi|38014602|gb|AAH03632.1| MRPS27 protein [Homo sa ( 222) 1409 301.2 1.5e-79 gi|47227588|emb|CAG09585.1| unnamed protein produc ( 402) 1368 292.9 8.8e-77 gi|149059166|gb|EDM10173.1| mitochondrial ribosoma ( 268) 1338 286.6 4.8e-75 gi|161612009|gb|AAI55952.1| LOC100127333 protein [ ( 397) 1236 265.5 1.5e-68 gi|29165736|gb|AAH49149.1| Mrps27 protein [Mus mus ( 248) 1191 256.1 6.6e-66 gi|50926011|gb|AAH79488.1| Zgc:100970 [Danio rerio ( 398) 1181 254.2 4e-65 gi|194383686|dbj|BAG59201.1| unnamed protein produ ( 195) 1135 244.4 1.7e-62 gi|20987810|gb|AAH30521.1| MRPS27 protein [Homo sa ( 168) 1054 227.6 1.7e-57 gi|149059162|gb|EDM10169.1| mitochondrial ribosoma ( 211) 887 193.1 5.3e-47 gi|148668514|gb|EDL00833.1| mitochondrial ribosoma ( 207) 859 187.2 2.9e-45 gi|149059164|gb|EDM10171.1| mitochondrial ribosoma ( 141) 708 155.8 5.6e-36 gi|149059163|gb|EDM10170.1| mitochondrial ribosoma ( 132) 707 155.6 6.1e-36 gi|149059168|gb|EDM10175.1| mitochondrial ribosoma ( 125) 518 116.5 3.6e-24 gi|72026752|ref|XP_799111.1| PREDICTED: hypothetic ( 372) 457 104.1 5.4e-20 gi|149059160|gb|EDM10167.1| mitochondrial ribosoma ( 96) 442 100.6 1.6e-19 gi|149059167|gb|EDM10174.1| mitochondrial ribosoma ( 90) 435 99.2 4.1e-19 gi|215497316|gb|EEC06810.1| conserved hypothetical ( 459) 264 64.2 6.9e-08 gi|212516110|gb|EEB18161.1| mitochondrial 28S ribo ( 449) 261 63.6 1e-07 gi|91081817|ref|XP_974377.1| PREDICTED: similar to ( 421) 258 63.0 1.5e-07 gi|156540696|ref|XP_001601605.1| PREDICTED: simila ( 449) 256 62.6 2.1e-07 gi|157013388|gb|EAA00401.4| AGAP011803-PA [Anophel ( 456) 232 57.6 6.8e-06 gi|108874517|gb|EAT38742.1| conserved hypothetical ( 448) 204 51.8 0.00037 gi|193587281|ref|XP_001946641.1| PREDICTED: simila ( 438) 202 51.4 0.00049 gi|122140177|sp|Q3SZ55.1|PTCD2_BOVIN RecName: Full ( 384) 200 50.9 0.00059 gi|110758704|ref|XP_001122395.1| PREDICTED: simila ( 300) 193 49.4 0.0013 gi|114599755|ref|XP_001155019.1| PREDICTED: pentat ( 388) 192 49.3 0.0019 >>gi|168267252|dbj|BAG09682.1| mitochondrial 28S ribosom (414 aa) initn: 2698 init1: 2698 opt: 2698 Z-score: 3023.6 bits: 568.4 E(): 1e-159 Smith-Waterman score: 2698; 100.000% identity (100.000% similar) in 414 aa overlap (2-415:1-414) 10 20 30 40 50 60 KIAA02 KMAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK 10 20 30 40 50 70 80 90 100 110 120 KIAA02 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA02 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL 300 310 320 330 340 350 370 380 390 400 410 KIAA02 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA 360 370 380 390 400 410 >>gi|209572725|sp|Q92552.3|RT27_HUMAN RecName: Full=28S (414 aa) initn: 2689 init1: 2689 opt: 2689 Z-score: 3013.5 bits: 566.6 E(): 3.8e-159 Smith-Waterman score: 2689; 99.758% identity (99.758% similar) in 414 aa overlap (2-415:1-414) 10 20 30 40 50 60 KIAA02 KMAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 MAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK 10 20 30 40 50 70 80 90 100 110 120 KIAA02 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE :::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::: gi|209 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLGAVLKALTSADGASEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA02 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL 300 310 320 330 340 350 370 380 390 400 410 KIAA02 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA 360 370 380 390 400 410 >>gi|55732098|emb|CAH92755.1| hypothetical protein [Pong (414 aa) initn: 2673 init1: 2673 opt: 2673 Z-score: 2995.6 bits: 563.3 E(): 3.7e-158 Smith-Waterman score: 2673; 99.034% identity (99.758% similar) in 414 aa overlap (2-415:1-414) 10 20 30 40 50 60 KIAA02 KMAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK :::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|557 MAASIVRRGMLLARQVVLPQLSPAGKRYLLSAAYVDSHKWEAREKEHYCLADLASLMDK 10 20 30 40 50 70 80 90 100 110 120 KIAA02 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA02 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL :::::::.:::::::::::::::::::::::::::::::::::::::::::.:::::::: gi|557 QSQNDEDDQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESESLLSLTTQL 300 310 320 330 340 350 370 380 390 400 410 KIAA02 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA :::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|557 VKEKLSTCEAEDIATYEQNLQQWHLDRVQLIQREQQQREQAKQEYQAQKAAKASA 360 370 380 390 400 410 >>gi|109077545|ref|XP_001098829.1| PREDICTED: similar to (414 aa) initn: 2552 init1: 2552 opt: 2552 Z-score: 2860.1 bits: 538.2 E(): 1.3e-150 Smith-Waterman score: 2552; 94.444% identity (98.309% similar) in 414 aa overlap (2-415:1-414) 10 20 30 40 50 60 KIAA02 KMAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK ::::::::::::::::::::: ::::: :::.::::::::::::::::::::::::::: gi|109 MAASIVRRGMLLARQVVLPQLFPAGKRCLLSAAYVDSHKWEAREKEHYCLADLASLMDK 10 20 30 40 50 70 80 90 100 110 120 KIAA02 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY ::::::::::::::::.::::::::::::::::::::::::::::::::::.:::::::: gi|109 TFERKLPVSSLTISRLVDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHSWIRQCLKY 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG ::::::::::::.:::::::::::::.::::::::::::::::::::: ::::::::::: gi|109 LLSLYVLFHCLAEKTDFSWEEERNFGGSLLLPGLKQKNSVGFSSQLYGCALLGKVELQQG 180 190 200 210 220 230 250 260 270 280 290 300 KIAA02 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE ::::::::::::::::::::::::::::::::::::::::: ::::::::::::::.::: gi|109 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALHVLDAVLKALTSADGVSEE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA02 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL :::.:::.: ::::::::::::::::::::::::.:::::::.:::::::.:::::::: gi|109 QSQKDEDKQEWEKLVEQLDIEETEQSKLPQYLERFQALHSKLQTLGKIESESLLSLTTQL 300 310 320 330 340 350 370 380 390 400 410 KIAA02 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA :::::::::::::.:::::::::::: ::::::::.:::.::::::::..::::: gi|109 VKEKLSTCEAEDIVTYEQNLQQWHLDRVQLIQREQEQREKAKQEYQAQEVAKASA 360 370 380 390 400 410 >>gi|114599745|ref|XP_001154270.1| PREDICTED: mitochondr (388 aa) initn: 2501 init1: 2368 opt: 2368 Z-score: 2654.5 bits: 500.0 E(): 3.7e-139 Smith-Waterman score: 2453; 93.720% identity (93.720% similar) in 414 aa overlap (2-415:1-388) 10 20 30 40 50 60 KIAA02 KMAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK :::::::::::::::::::::::: ::::::::: gi|114 MAASIVRRGMLLARQVVLPQLSPA--------------------------ADLASLMDK 10 20 30 70 80 90 100 110 120 KIAA02 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY 40 50 60 70 80 90 130 140 150 160 170 180 KIAA02 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ 100 110 120 130 140 150 190 200 210 220 230 240 KIAA02 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG 160 170 180 190 200 210 250 260 270 280 290 300 KIAA02 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTSADGASEE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA02 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQL 280 290 300 310 320 330 370 380 390 400 410 KIAA02 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA 340 350 360 370 380 >>gi|114599749|ref|XP_001154328.1| PREDICTED: mitochondr (358 aa) initn: 2335 init1: 2335 opt: 2335 Z-score: 2618.0 bits: 493.2 E(): 4e-137 Smith-Waterman score: 2335; 100.000% identity (100.000% similar) in 358 aa overlap (58-415:1-358) 30 40 50 60 70 80 KIAA02 RYLLSSAYVDSHKWEAREKEHYCLADLASLMDKTFERKLPVSSLTISRLIDNISSREEID :::::::::::::::::::::::::::::: gi|114 MDKTFERKLPVSSLTISRLIDNISSREEID 10 20 30 90 100 110 120 130 140 KIAA02 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL 40 50 60 70 80 90 150 160 170 180 190 200 KIAA02 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA 100 110 120 130 140 150 210 220 230 240 250 260 KIAA02 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV 160 170 180 190 200 210 270 280 290 300 310 320 KIAA02 AASPEDIKLCREALDVLDAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AASPEDIKLCREALDVLDAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSK 220 230 240 250 260 270 330 340 350 360 370 380 KIAA02 LPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDL 280 290 300 310 320 330 390 400 410 KIAA02 VQLIQREQQQREQAKQEYQAQKAAKASA :::::::::::::::::::::::::::: gi|114 VQLIQREQQQREQAKQEYQAQKAAKASA 340 350 >>gi|119616108|gb|EAW95702.1| mitochondrial ribosomal pr (358 aa) initn: 2326 init1: 2326 opt: 2326 Z-score: 2608.0 bits: 491.3 E(): 1.5e-136 Smith-Waterman score: 2326; 99.721% identity (99.721% similar) in 358 aa overlap (58-415:1-358) 30 40 50 60 70 80 KIAA02 RYLLSSAYVDSHKWEAREKEHYCLADLASLMDKTFERKLPVSSLTISRLIDNISSREEID :::::::::::::::::::::::::::::: gi|119 MDKTFERKLPVSSLTISRLIDNISSREEID 10 20 30 90 100 110 120 130 140 KIAA02 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL 40 50 60 70 80 90 150 160 170 180 190 200 KIAA02 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA 100 110 120 130 140 150 210 220 230 240 250 260 KIAA02 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV 160 170 180 190 200 210 270 280 290 300 310 320 KIAA02 AASPEDIKLCREALDVLDAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSK ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|119 AASPEDIKLCREALDVLGAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSK 220 230 240 250 260 270 330 340 350 360 370 380 KIAA02 LPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDL 280 290 300 310 320 330 390 400 410 KIAA02 VQLIQREQQQREQAKQEYQAQKAAKASA :::::::::::::::::::::::::::: gi|119 VQLIQREQQQREQAKQEYQAQKAAKASA 340 350 >>gi|194390288|dbj|BAG61906.1| unnamed protein product [ (358 aa) initn: 2314 init1: 2314 opt: 2314 Z-score: 2594.5 bits: 488.8 E(): 8.2e-136 Smith-Waterman score: 2314; 99.162% identity (99.441% similar) in 358 aa overlap (58-415:1-358) 30 40 50 60 70 80 KIAA02 RYLLSSAYVDSHKWEAREKEHYCLADLASLMDKTFERKLPVSSLTISRLIDNISSREEID :::::::::::: ::::::::::::::::: gi|194 MDKTFERKLPVSPLTISRLIDNISSREEID 10 20 30 90 100 110 120 130 140 KIAA02 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL 40 50 60 70 80 90 150 160 170 180 190 200 KIAA02 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA 100 110 120 130 140 150 210 220 230 240 250 260 KIAA02 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV 160 170 180 190 200 210 270 280 290 300 310 320 KIAA02 AASPEDIKLCREALDVLDAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSK ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|194 AASPEDIKLCREALDVLGAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSK 220 230 240 250 260 270 330 340 350 360 370 380 KIAA02 LPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|194 LPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLNL 280 290 300 310 320 330 390 400 410 KIAA02 VQLIQREQQQREQAKQEYQAQKAAKASA :::::::::::::::::::::::::::: gi|194 VQLIQREQQQREQAKQEYQAQKAAKASA 340 350 >>gi|55728852|emb|CAH91164.1| hypothetical protein [Pong (358 aa) initn: 2314 init1: 2314 opt: 2314 Z-score: 2594.5 bits: 488.8 E(): 8.2e-136 Smith-Waterman score: 2314; 99.162% identity (99.721% similar) in 358 aa overlap (58-415:1-358) 30 40 50 60 70 80 KIAA02 RYLLSSAYVDSHKWEAREKEHYCLADLASLMDKTFERKLPVSSLTISRLIDNISSREEID :::::::::::::::::::::::::::::: gi|557 MDKTFERKLPVSSLTISRLIDNISSREEID 10 20 30 90 100 110 120 130 140 KIAA02 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 HAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKYDAQDKALYTLVNKVQYGIFPDNFTFNL 40 50 60 70 80 90 150 160 170 180 190 200 KIAA02 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQLLSLYVLFHCLAKKTDFSWEEERNFGA 100 110 120 130 140 150 210 220 230 240 250 260 KIAA02 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 SLLLPGLKQKNSVGFSSQLYGYALLGKVELQQGLRAVYHNMPLIWKPGYLDRALQVMEKV 160 170 180 190 200 210 270 280 290 300 310 320 KIAA02 AASPEDIKLCREALDVLDAVLKALTSADGASEEQSQNDEDNQGSEKLVEQLDIEETEQSK ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|557 AASPEDIKLCREALDVLDAVLKALTSADGASEEQSQNDEDDQGSEKLVEQLDIEETEQSK 220 230 240 250 260 270 330 340 350 360 370 380 KIAA02 LPQYLERFKALHSKLQALGKIESEGLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDL ::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|557 LPQYLERFKALHSKLQALGKIESESLLSLTTQLVKEKLSTCEAEDIATYEQNLQQWHLDR 280 290 300 310 320 330 390 400 410 KIAA02 VQLIQREQQQREQAKQEYQAQKAAKASA :::::::::::::::::::::::::::: gi|557 VQLIQREQQQREQAKQEYQAQKAAKASA 340 350 >>gi|118573855|sp|Q32PI8.1|RT27_BOVIN RecName: Full=28S (415 aa) initn: 2276 init1: 1722 opt: 2252 Z-score: 2524.2 bits: 476.0 E(): 6.7e-132 Smith-Waterman score: 2252; 82.169% identity (95.181% similar) in 415 aa overlap (2-415:1-415) 10 20 30 40 50 60 KIAA02 KMAASIVRRGMLLARQVVLPQLSPAGKRYLLSSAYVDSHKWEAREKEHYCLADLASLMDK ::: .:::...:::.:.::::: ::::::::.:: ::.::::: :: :::::::::: gi|118 MAAPMVRRAIFLARNVLLPQLSLAGKRYLLSAAYEDSRKWEARAKEDCHLADLASLMDK 10 20 30 40 50 70 80 90 100 110 120 KIAA02 TFERKLPVSSLTISRLIDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY :.:::::::::::::..::::::::::::::::::::::::::::::::::::::::::: gi|118 TYERKLPVSSLTISRFVDNISSREEIDHAEYYLYKFRHSPNCWYLRNWTIHTWIRQCLKY 60 70 80 90 100 110 130 140 150 160 170 180 KIAA02 DAQDKALYTLVNKVQYGIFPDNFTFNLLMDSFIKKENYKDALSVVFEVMMQEAFEVPSTQ :::::::::::::::::::::.::::::: ::::::::::::::::.:::::::::::: gi|118 GAQDKALYTLVNKVQYGIFPDNYTFNLLMDHFIKKENYKDALSVVFEIMMQEAFEVPSTQ 120 130 140 150 160 170 190 200 210 220 230 240 KIAA02 LLSLYVLFHCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGFSSQLYGYALLGKVELQQG :::::::..::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|118 LLSLYVLYQCLAKKTDFSWEEERNFGASLLLPGLKQKNSVGLSSQLYGYALLGKVELQQG 180 190 200 210 220 230 250 260 270 280 290 KIAA02 LRAVYHNMPLIWKPGYLDRALQVMEKVAASPEDIKLCREALDVLDAVLKALTS-ADGASE ::::::::::.:.:::::::::::::::.:::: ::::::: ::: .:::::. :. . : gi|118 LRAVYHNMPLLWRPGYLDRALQVMEKVASSPEDGKLCREALGVLDRALKALTAPAQESPE 240 250 260 270 280 290 300 310 320 330 340 350 KIAA02 EQSQNDEDNQGSEKLVEQLDIEETEQSKLPQYLERFKALHSKLQALGKIESEGLLSLTTQ :: :. :.. .::.:.::::.:::::::::.:.::..:::::::::::.:::.::.:::: gi|118 EQPQEGEESPASEELMEQLDVEETEQSKLPRYVERYEALHSKLQALGKVESESLLTLTTQ 300 310 320 330 340 350 360 370 380 390 400 410 KIAA02 LVKEKLSTCEAEDIATYEQNLQQWHLDLVQLIQREQQQREQAKQEYQAQKAAKASA ::::.: ::::::::::::.::.:::.::.::.::...::.:. ...:..::::.: gi|118 LVKEQLPTCEAEDIATYEQKLQEWHLELVNLIEREKEMREKARLKHEARRAAKAAA 360 370 380 390 400 410 415 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Wed Mar 4 08:35:20 2009 done: Wed Mar 4 08:40:13 2009 Total Scan time: 1533.490 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]