hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21532928/chunk_1/iprscan-20080501-21532928.nocrc
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Query sequence: KIAA0262
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00097.15.fs Zinc finger, C3HC4 type (RING finger)           28.4    1.3e-09   1
PF00097.15.ls Zinc finger, C3HC4 type (RING finger)           30.2    6.8e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00097.15.fs   1/1     225   266 ..     1    50 []    28.4  1.3e-09
PF00097.15.ls   1/1     225   266 ..     1    50 []    30.2  6.8e-06

Alignments of top-scoring domains:
PF00097.15.fs: domain 1 of 1, from 225 to 266: score 28.4, E = 1.3e-09
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlss.sgntt
                      C+ICl +++ ++     i+ CgH      fC +C++++ls ++++++
    KIAA0262   225    CPICLYPPTAAK-----ITRCGHI-----FCWACILHYLSLsEKTWS 261  

                   .CplC<-*
                   +Cp+C   
    KIAA0262   262 kCPIC    266  

PF00097.15.ls: domain 1 of 1, from 225 to 266: score 30.2, E = 6.8e-06
                   *->CrICleelkepsndfplilpCgHsGslkyfCrsClerwlss.sgntt
                      C+ICl +++ ++     i+ CgH      fC +C++++ls ++++++
    KIAA0262   225    CPICLYPPTAAK-----ITRCGHI-----FCWACILHYLSLsEKTWS 261  

                   .CplC<-*
                   +Cp+C   
    KIAA0262   262 kCPIC    266  

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