hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21284253/chunk_1/iprscan-20080501-21284253.nocrc
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Query sequence: KIAA0247
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00032                                                  58.4    9.4e-13   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00032    1/1      43   103 ..     1    79 []    58.4  9.4e-13

Alignments of top-scoring domains:
SM00032: domain 1 of 1, from 43 to 103: score 58.4, E = 9.4e-13
                   *->Cp.PppdidienGrvtsssssitstpkgtysyGstvtysCnpGYtlv
                      Cp Pp   ++enG +++++++      ++ + Gs+++y C +GY+l+
    KIAA0247    43    CPlPP---EPENGGYICHPRP----CRDPLTAGSVIEYLCAEGYMLK 82   

                   GgsqpekSrestsstitCtsn.WspppsgplPtC<-*
                   G+           +++tC +++W p ++    +C   
    KIAA0247    83 GD----------YKYLTCKNGeWKPAME---ISC    103  

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