hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-21205812/chunk_1/iprscan-20080501-21205812.nocrc
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Query sequence: KIAA0244
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00510                                                 175.0    7.2e-48   1
SM00249                                                  48.5    8.7e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00249    1/1     724   775 ..     1    39 []    48.5  8.7e-10
SM00510    1/1     934  1034 ..     1   118 []   175.0  7.2e-48

Alignments of top-scoring domains:
SM00249: domain 1 of 1, from 724 to 775: score 48.5, E = 8.7e-10
                   *->yC.vCgk....g.llqCdkgCdrwyHv.Clgpple......epdg.w
                       C++C+k++++  +++C  +Cd+w+H +C+g++l++ ++ +e+d+++
    KIAA0244   724    QCgFCKKphgnRfMVGCG-RCDDWFHGdCVGLSLSqaqqmgEEDKeY 769  

                   yCprCk<-*
                   +C +C+   
    KIAA0244   770 VCVKCC    775  

SM00510: domain 1 of 1, from 934 to 1034: score 175.0, E = 7.2e-48
                   *->dkvRdkcqemLlkalqkesdpeeleaagdekkkltaldptelAvqiE
                      ++vR++++++L+k+l++++++++            + ++ ++A++iE
    KIAA0244   934    QSVRHSLKDILMKRLTDSNLKVP------------EEKAAKVATKIE 968  

                   aelfsvlaqdefgttdkkYknKyRSlyfNLKDkkNpdLRrkVLnGEItpe
                   +elfs     +f++td+kYknKyRSl+fNLKD+kN+ L++kVL+GE+tp+
    KIAA0244   969 KELFS-----FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 1013 

                   kLvtMtaeELASdeLkelrek<-*
                   +L++M++eELAS+eL+++r++   
    KIAA0244  1014 HLIRMSPEELASKELAAWRRR    1034 

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