# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha02748.fasta.nr -Q ../query/KIAA0227.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA0227, 336 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7810851 sequences
Expectation_n fit: rho(ln(x))= 5.9834+/-0.000208; mu= 7.7095+/- 0.012
mean_var=139.6528+/-26.698, 0's: 35 Z-trim: 66 B-trim: 64 in 2/64
Lambda= 0.108530
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|109084166|ref|XP_001082201.1| PREDICTED: simila ( 440) 2177 352.0 1.3e-94
gi|28839621|gb|AAH47950.1| TTC9 protein [Homo sapi ( 277) 1886 306.2 5e-81
gi|152031717|sp|Q92623.2|TTC9A_HUMAN RecName: Full ( 222) 1490 244.0 2e-62
gi|119601449|gb|EAW81043.1| hCG20925, isoform CRA_ ( 222) 1484 243.1 3.8e-62
gi|148670774|gb|EDL02721.1| mCG7933, isoform CRA_b ( 258) 1298 214.1 2.5e-53
gi|22137664|gb|AAH28891.1| Ttc9 protein [Mus muscu ( 259) 1298 214.1 2.5e-53
gi|123795474|sp|Q3V038.1|TTC9A_MOUSE RecName: Full ( 219) 1267 209.1 6.4e-52
gi|187469053|gb|AAI66802.1| Ttc9 protein [Rattus n ( 249) 1171 194.2 2.3e-47
gi|74149597|dbj|BAE36425.1| unnamed protein produc ( 164) 979 163.9 2e-38
gi|118091720|ref|XP_001231669.1| PREDICTED: simila ( 208) 909 153.0 4.6e-35
gi|197245591|gb|AAI68518.1| Unknown (protein for M ( 180) 874 147.5 1.9e-33
gi|220678844|emb|CAX13703.1| novel protein similar ( 175) 796 135.3 8.8e-30
gi|68371654|ref|XP_689195.1| PREDICTED: similar to ( 217) 796 135.4 1e-29
gi|47221312|emb|CAG13248.1| unnamed protein produc ( 182) 762 130.0 3.6e-28
gi|73948330|ref|XP_541617.2| PREDICTED: hypothetic ( 235) 751 128.4 1.4e-27
gi|148744921|gb|AAI42208.1| TTC9B protein [Bos tau ( 235) 743 127.1 3.4e-27
gi|149056508|gb|EDM07939.1| similar to hypothetica ( 239) 743 127.1 3.4e-27
gi|26332871|dbj|BAC30153.1| unnamed protein produc ( 229) 739 126.5 5.1e-27
gi|81905456|sp|Q9D6E4.1|TTC9B_MOUSE RecName: Full= ( 239) 739 126.5 5.2e-27
gi|90074984|dbj|BAE87172.1| unnamed protein produc ( 239) 728 124.8 1.7e-26
gi|74759948|sp|Q8N6N2.1|TTC9B_HUMAN RecName: Full= ( 239) 726 124.5 2.1e-26
gi|149557493|ref|XP_001520356.1| PREDICTED: hypoth ( 212) 724 124.1 2.5e-26
gi|126329327|ref|XP_001371061.1| PREDICTED: hypoth ( 226) 722 123.8 3.2e-26
gi|94734356|emb|CAK04202.1| novel protein similar ( 243) 684 117.9 2.1e-24
gi|111308980|gb|AAI21246.1| Tetratricopeptide repe ( 170) 654 113.0 4.3e-23
gi|73964259|ref|XP_547886.2| PREDICTED: similar to ( 221) 564 99.1 8.8e-19
gi|126333613|ref|XP_001362456.1| PREDICTED: simila ( 171) 514 91.1 1.7e-16
gi|57100453|ref|XP_540903.1| PREDICTED: similar to ( 171) 512 90.8 2.1e-16
gi|152112336|sp|A4IFF3|TTC9C_BOVIN Tetratricopepti ( 171) 507 90.0 3.6e-16
gi|119594492|gb|EAW74086.1| tetratricopeptide repe ( 304) 507 90.3 5.3e-16
gi|148701430|gb|EDL33377.1| tetratricopeptide repe ( 171) 503 89.4 5.6e-16
gi|81911277|sp|Q6P5P3.1|TTC9C_RAT RecName: Full=Te ( 171) 502 89.2 6.2e-16
gi|194218331|ref|XP_001916410.1| PREDICTED: simila ( 171) 502 89.2 6.2e-16
gi|119902200|ref|XP_001251776.1| PREDICTED: simila ( 171) 499 88.7 8.6e-16
gi|74759911|sp|Q8N5M4.1|TTC9C_HUMAN RecName: Full= ( 171) 498 88.6 9.6e-16
gi|61820159|ref|XP_585522.1| PREDICTED: similar to ( 171) 494 88.0 1.5e-15
gi|81912990|sp|Q810A3.1|TTC9C_MOUSE RecName: Full= ( 171) 494 88.0 1.5e-15
gi|12843142|dbj|BAB25875.1| unnamed protein produc ( 171) 485 86.6 3.9e-15
gi|210117968|gb|EEA65702.1| hypothetical protein B ( 175) 457 82.2 8.4e-14
gi|152112337|sp|A4IHU6.1|TTC9C_XENTR RecName: Full ( 178) 442 79.8 4.3e-13
gi|194215447|ref|XP_001916487.1| PREDICTED: simila ( 220) 435 78.9 1.1e-12
gi|47225018|emb|CAF97433.1| unnamed protein produc ( 268) 435 79.0 1.2e-12
gi|109124805|ref|XP_001089917.1| PREDICTED: hypoth ( 219) 433 78.5 1.3e-12
gi|114638081|ref|XP_001156979.1| PREDICTED: tetrat ( 146) 425 77.1 2.4e-12
gi|29124589|gb|AAH49032.1| Zgc:56497 [Danio rerio] ( 217) 423 77.0 3.9e-12
gi|209735350|gb|ACI68544.1| Tetratricopeptide repe ( 224) 410 75.0 1.6e-11
gi|149524273|ref|XP_001514442.1| PREDICTED: simila ( 82) 399 72.7 2.8e-11
gi|149478512|ref|XP_001515418.1| PREDICTED: simila ( 60) 370 68.0 5.3e-10
gi|149641284|ref|XP_001513252.1| PREDICTED: simila ( 110) 321 60.7 1.6e-07
gi|114677253|ref|XP_524267.2| PREDICTED: similar t ( 216) 306 58.6 1.3e-06
>>gi|109084166|ref|XP_001082201.1| PREDICTED: similar to (440 aa)
initn: 1623 init1: 1623 opt: 2177 Z-score: 1854.8 bits: 352.0 E(): 1.3e-94
Smith-Waterman score: 2177; 96.755% identity (97.640% similar) in 339 aa overlap (1-336:103-440)
10 20 30
KIAA02 SGPRSPRSASPGPASTGPRHPQVAEGGGRE
:::::::::::::::::::.::::::::::
gi|109 HTHRDTPQRQPGSTKRTKLLPGQRPSPPPHSGPRSPRSASPGPASTGPRRPQVAEGGGRE
80 90 100 110 120 130
40 50 60 70 80
KIAA02 RAARSREAGEGPASEAAAAAA---GAASGSSGENGSAGRQTAAGCHGRHEACEARGRRPR
::: : ::::: ::::::::: ::::::::::::::::::::::::::::::::::::
gi|109 RAAWSGEAGEGRASEAAAAAAAAAGAASGSSGENGSAGRQTAAGCHGRHEACEARGRRPR
140 150 160 170 180 190
90 100 110 120 130 140
KIAA02 LLNPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPG
::::::::::::: ::::::::::::::::::::.:::::::::::::::::::::::::
gi|109 LLNPGRRGGGGGG-QIAARTRRRGGGRMERKGSASGAKGNPSPPAAGEGQRPPPPLCVPG
200 210 220 230 240 250
150 160 170 180 190 200
KIAA02 GGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 GGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPP
260 270 280 290 300 310
210 220 230 240 250 260
KIAA02 PGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYC
:::::.:::::::::: :::::::::::::::::::::::::::::::::::::::::::
gi|109 PGEREQDSRAASPAGAPKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYC
320 330 340 350 360 370
270 280 290 300 310 320
KIAA02 LKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 LKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSR
380 390 400 410 420 430
330
KIAA02 CSQREKEAM
:::::::::
gi|109 CSQREKEAM
440
>>gi|28839621|gb|AAH47950.1| TTC9 protein [Homo sapiens] (277 aa)
initn: 1886 init1: 1886 opt: 1886 Z-score: 1610.9 bits: 306.2 E(): 5e-81
Smith-Waterman score: 1886; 100.000% identity (100.000% similar) in 277 aa overlap (60-336:1-277)
30 40 50 60 70 80
KIAA02 ERAARSREAGEGPASEAAAAAAGAASGSSGENGSAGRQTAAGCHGRHEACEARGRRPRLL
::::::::::::::::::::::::::::::
gi|288 ENGSAGRQTAAGCHGRHEACEARGRRPRLL
10 20 30
90 100 110 120 130 140
KIAA02 NPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|288 NPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGG
40 50 60 70 80 90
150 160 170 180 190 200
KIAA02 GGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|288 GGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPG
100 110 120 130 140 150
210 220 230 240 250 260
KIAA02 ERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|288 ERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLK
160 170 180 190 200 210
270 280 290 300 310 320
KIAA02 VLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|288 VLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCS
220 230 240 250 260 270
330
KIAA02 QREKEAM
:::::::
gi|288 QREKEAM
>>gi|152031717|sp|Q92623.2|TTC9A_HUMAN RecName: Full=Tet (222 aa)
initn: 1490 init1: 1490 opt: 1490 Z-score: 1277.0 bits: 244.0 E(): 2e-62
Smith-Waterman score: 1490; 100.000% identity (100.000% similar) in 222 aa overlap (115-336:1-222)
90 100 110 120 130 140
KIAA02 RPRLLNPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLC
::::::::::::::::::::::::::::::
gi|152 MERKGSAAGAKGNPSPPAAGEGQRPPPPLC
10 20 30
150 160 170 180 190 200
KIAA02 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|152 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
40 50 60 70 80 90
210 220 230 240 250 260
KIAA02 LPPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|152 LPPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
100 110 120 130 140 150
270 280 290 300 310 320
KIAA02 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|152 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK
160 170 180 190 200 210
330
KIAA02 LSRCSQREKEAM
::::::::::::
gi|152 LSRCSQREKEAM
220
>>gi|119601449|gb|EAW81043.1| hCG20925, isoform CRA_a [H (222 aa)
initn: 1484 init1: 1484 opt: 1484 Z-score: 1271.9 bits: 243.1 E(): 3.8e-62
Smith-Waterman score: 1484; 99.550% identity (99.550% similar) in 222 aa overlap (115-336:1-222)
90 100 110 120 130 140
KIAA02 RPRLLNPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLC
::::::::::::::::::::::::::::::
gi|119 MERKGSAAGAKGNPSPPAAGEGQRPPPPLC
10 20 30
150 160 170 180 190 200
KIAA02 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
40 50 60 70 80 90
210 220 230 240 250 260
KIAA02 LPPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
:::::::::::: :::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LPPPGERERDSRPASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
100 110 120 130 140 150
270 280 290 300 310 320
KIAA02 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK
160 170 180 190 200 210
330
KIAA02 LSRCSQREKEAM
::::::::::::
gi|119 LSRCSQREKEAM
220
>>gi|148670774|gb|EDL02721.1| mCG7933, isoform CRA_b [Mu (258 aa)
initn: 971 init1: 759 opt: 1298 Z-score: 1113.7 bits: 214.1 E(): 2.5e-53
Smith-Waterman score: 1349; 78.676% identity (86.765% similar) in 272 aa overlap (65-336:1-258)
40 50 60 70 80 90
KIAA02 SREAGEGPASEAAAAAAGAASGSSGENGSAGRQTAAGCHGRHEACEARGRRPRLLNPGRR
:. .: .:: ..: ::..: ::.:: :
gi|148 GQARGAQGNGRGRVCGARSQRSALLKPGSR
10 20 30
100 110 120 130 140 150
KIAA02 GGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPA
. :.:: ::::::: :: ..::::::: ::: :: :: :::.::: ::
gi|148 RALGAGG-----------GRMERKGLAARSSGNPSPPALGEGPRPVPPPCVPSGGG-APE
40 50 60 70
160 170 180 190 200 210
KIAA02 RGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERERD
:::.:.:::::::::::::::::::::::::::::::::::::::::::::: ...:::
gi|148 RGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLP--SQEERD
80 90 100 110 120 130
220 230 240 250 260 270
KIAA02 SRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKE
.: :: ::. : .:::::::::::::::::::::::::::::::::::::::::::::::
gi|148 ARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKKE
140 150 160 170 180 190
280 290 300 310 320 330
KIAA02 GENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREKE
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|148 GENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKLSRCSQREKE
200 210 220 230 240 250
KIAA02 AM
::
gi|148 AM
>>gi|22137664|gb|AAH28891.1| Ttc9 protein [Mus musculus] (259 aa)
initn: 971 init1: 759 opt: 1298 Z-score: 1113.7 bits: 214.1 E(): 2.5e-53
Smith-Waterman score: 1354; 78.755% identity (86.813% similar) in 273 aa overlap (64-336:1-259)
40 50 60 70 80 90
KIAA02 RSREAGEGPASEAAAAAAGAASGSSGENGSAGRQTAAGCHGRHEACEARGRRPRLLNPGR
::. .: .:: ..: ::..: ::.::
gi|221 AGQARGAQGNGRGRVCGARSQRSALLKPGS
10 20 30
100 110 120 130 140 150
KIAA02 RGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAP
: . :.:: ::::::: :: ..::::::: ::: :: :: :::.::: ::
gi|221 RRALGAGG-----------GRMERKGLAARSSGNPSPPALGEGPRPVPPPCVPSGGG-AP
40 50 60 70
160 170 180 190 200 210
KIAA02 ARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLLPPPGERER
:::.:.::::::::::::::::::::::::::::::::::::::::::::: :...::
gi|221 ERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGLL--PSQEER
80 90 100 110 120 130
220 230 240 250 260 270
KIAA02 DSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKK
:.: :: ::. : .::::::::::::::::::::::::::::::::::::::::::::::
gi|221 DARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVKEYCLKVLKK
140 150 160 170 180 190
280 290 300 310 320 330
KIAA02 EGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMKLSRCSQREK
:::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
gi|221 EGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMKLSRCSQREK
200 210 220 230 240 250
KIAA02 EAM
:::
gi|221 EAM
>>gi|123795474|sp|Q3V038.1|TTC9A_MOUSE RecName: Full=Tet (219 aa)
initn: 940 init1: 759 opt: 1267 Z-score: 1088.3 bits: 209.1 E(): 6.4e-52
Smith-Waterman score: 1267; 88.288% identity (93.694% similar) in 222 aa overlap (115-336:1-219)
90 100 110 120 130 140
KIAA02 RPRLLNPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLC
::::: :: ..::::::: ::: :: :: :
gi|123 MERKGLAARSSGNPSPPALGEGPRPVPPPC
10 20 30
150 160 170 180 190 200
KIAA02 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
::.::: :: :::.:.::::::::::::::::::::::::::::::::::::::::::::
gi|123 VPSGGG-APERGQAGTAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
40 50 60 70 80
210 220 230 240 250 260
KIAA02 LPPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
: :...:::.: :: ::. : .:::::::::::::::::::::::::::::::::::::
gi|123 L--PSQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
90 100 110 120 130 140
270 280 290 300 310 320
KIAA02 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
gi|123 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQLTEMK
150 160 170 180 190 200
330
KIAA02 LSRCSQREKEAM
::::::::::::
gi|123 LSRCSQREKEAM
210
>>gi|187469053|gb|AAI66802.1| Ttc9 protein [Rattus norve (249 aa)
initn: 1190 init1: 1004 opt: 1171 Z-score: 1006.4 bits: 194.2 E(): 2.3e-47
Smith-Waterman score: 1171; 81.081% identity (89.640% similar) in 222 aa overlap (115-336:1-216)
90 100 110 120 130 140
KIAA02 RPRLLNPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLC
::::: :: :.::::::: ::: :: :: :
gi|187 MERKGLAARASGNPSPPALGEGPRPGPPPC
10 20 30
150 160 170 180 190 200
KIAA02 VPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
::.::: :: :::.::::::::::::::::::::::::::::::::::::::::::::::
gi|187 VPSGGG-APERGQAGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELKGL
40 50 60 70 80
210 220 230 240 250 260
KIAA02 LPPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
::::::::::.: ::::: : .:::::::::::::::::::::::::::::::::::::
gi|187 LPPPGERERDARPASPAGIPKASRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNYERVK
90 100 110 120 130 140
270 280 290 300 310 320
KIAA02 EYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQLTEMK
:::::::::::::::::::.::::::::::::::::::::::.::. .: ... .:
gi|187 EYCLKVLKKEGENFKALYRAGVAFYHLGDYDKALYYLKEARTRQPS----VR-VRIHALK
150 160 170 180 190 200
330
KIAA02 LSRCSQREKEAM
. : .. .:..
gi|187 IIRRARWANEGLKKSSSSKPCGVHLQPQVPGEQRQEYHLTAGVPD
210 220 230 240
>>gi|74149597|dbj|BAE36425.1| unnamed protein product [M (164 aa)
initn: 759 init1: 759 opt: 979 Z-score: 846.1 bits: 163.9 E(): 2e-38
Smith-Waterman score: 979; 92.169% identity (96.386% similar) in 166 aa overlap (171-336:1-164)
150 160 170 180 190 200
KIAA02 PPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLE
::::::::::::::::::::::::::::::
gi|741 AHEFKSQGAQCYKDKKFREAIGKYHRALLE
10 20 30
210 220 230 240 250 260
KIAA02 LKGLLPPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNY
:::::: ...:::.: :: ::. : .:::::::::::::::::::::::::::::::::
gi|741 LKGLLP--SQEERDARPASSAGVPKSSRLSEEQSKTVEAIEIDCYNSLAACLLQAELVNY
40 50 60 70 80
270 280 290 300 310 320
KIAA02 ERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQL
::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
gi|741 ERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTRQPTDTNVIRYIQL
90 100 110 120 130 140
330
KIAA02 TEMKLSRCSQREKEAM
::::::::::::::::
gi|741 TEMKLSRCSQREKEAM
150 160
>>gi|118091720|ref|XP_001231669.1| PREDICTED: similar to (208 aa)
initn: 899 init1: 656 opt: 909 Z-score: 785.7 bits: 153.0 E(): 4.6e-35
Smith-Waterman score: 938; 70.925% identity (81.498% similar) in 227 aa overlap (115-336:1-208)
90 100 110 120 130 140
KIAA02 RPRLLNPGRRGGGGGGGQIAARTRRRGGGRMERKGSAAGAKGNPSPPAAGEGQRPPPPLC
::: . ::: : : . .::.:.
gi|118 MERASPAAG-KLNAGGRGAGDGH-------
10 20
150 160 170 180 190 200
KIAA02 VPGGGGGAPARGQVGAA--AEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRALLELK
: .::. :. ..:: :::.::: :: .:::.:::::::::::::::::::::::::
gi|118 --GIAGGSQPRAAAAAAGGAEPGELIGRALDFKSEGAQCYKDKKFREAIGKYHRALLELK
30 40 50 60 70 80
210 220 230 240 250
KIAA02 GLL---PPPGERERDSRAASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQAELVN
.:: : :.: ::.: : ::::: ..:::::.:::::::::::::::::
gi|118 ALLLSQEPGGQR--------PANA-AAGGLSEEQRQAVEAIEVDCYNSLAACLLQAELVN
90 100 110 120 130
260 270 280 290 300 310
KIAA02 YERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVIRYIQ
::::::::::::.::::::::::::::::::::::.::::::::::..::::::::::::
gi|118 YERVKEYCLKVLQKEGENFKALYRSGVAFYHLGDYNKALYYLKEARSRQPTDTNVIRYIQ
140 150 160 170 180 190
320 330
KIAA02 LTEMKLSRCSQREKEAM
::::::::::::::::.
gi|118 LTEMKLSRCSQREKEAL
200
336 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Wed Mar 4 06:00:45 2009 done: Wed Mar 4 06:06:00 2009
Total Scan time: 1484.000 Total Display time: 0.060
Function used was FASTA [version 34.26.5 April 26, 2007]