hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20372343/chunk_1/iprscan-20080501-20372343.nocrc
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Query sequence: KIAA0218
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
PF01026.11.ls TatD related DNase                           274.6    1.8e-79   1
PF01026.11.fs TatD related DNase                           273.9      3e-79   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
PF01026.11.fs   1/1     509   776 ..     1   327 []   273.9    3e-79
PF01026.11.ls   1/1     509   776 ..     1   327 []   274.6  1.8e-79

Alignments of top-scoring domains:
PF01026.11.fs: domain 1 of 1, from 509 to 776: score 273.9, E = 3e-79
                   *->MkkliDtHcHLDpl.gllA..........idfe.Fdkdreevedier
                       +++iDtHcHLD+l  +l+ +++ ++ ++i++++F k++ +   i+ 
    KIAA0218   509    -EGFIDTHCHLDMLySKLSfqgtftkfrkIYSSsFPKEFQGC--ISD 552  

                   areagvkkvvvpahdpgrtgvgtsledfdalralelaekypnvaglklya
                   ++                     ++++  +++  el ++  ++    ++ 
    KIAA0218   553 FC---------------------DPRTLTDCLWEELLKE--DL----VWG 575  

                   avGvHPheadefsdedleeleelleelelhaklveepdkvvAIGEiGLDy
                   a+G+HPh+a+++s+  + +l+++l++   +        k+vA GE+GLDy
    KIAA0218   576 AFGCHPHFARYYSESQERNLLQALRH---P--------KAVAFGEMGLDY 614  

                   ypvyakderrqfspkkevQeeevFraQleLAkelnlPvviHtRdAheaet
                           ++++ p  ++Q++ vF++Ql+LA  l++P+viH+R+A+e   
    KIAA0218   615 S-------YKCTTPV-PEQHK-VFERQLQLAVSLKKPLVIHCREADE--- 652  

                   dtleiLkee.gpkvggvlHcFtGsveeAkelldlG..fYisisGivTfKn
                   d+lei+k++ +p+ +++ HcFtGs+ + + ll++ +++ ++++ ++T++ 
    KIAA0218   653 DLLEIMKKFvPPDYKIHRHCFTGSYPVIEPLLKYFpnMSVGFTAVLTYSS 702  

                   taeelrevakeiPldrlLlETDaPylaP.reakrdvvPtHdeedPekkkl
                    a e+re++++iPl+r+++ETDaPy +P+       vP            
    KIAA0218   703 -AWEAREALRQIPLERIIVETDAPYFLPrQ------VP------------ 733  

                   rLpyrGkkrNePayvphvaekiAelkgisleevakitteNakrlFg<-*
                      +  ++  +P    h++++iA++k+ +l  + ++++eN+ rl++   
    KIAA0218   734 ---KSLCQYAHPGLALHTVREIARVKDQPLSLTLAALRENTSRLYS    776  

PF01026.11.ls: domain 1 of 1, from 509 to 776: score 274.6, E = 1.8e-79
                   *->MkkliDtHcHLDpl.gllA..........idfe.Fdkdreevedier
                       +++iDtHcHLD+l  +l+ +++ ++ ++i++++F k++ +   i+ 
    KIAA0218   509    -EGFIDTHCHLDMLySKLSfqgtftkfrkIYSSsFPKEFQGC--ISD 552  

                   areagvkkvvvpahdpgrtgvgtsledfdalralelaekypnvaglklya
                   ++                     ++++  +++  el ++  ++    ++ 
    KIAA0218   553 FC---------------------DPRTLTDCLWEELLKE--DL----VWG 575  

                   avGvHPheadefsdedleeleelleelelhaklveepdkvvAIGEiGLDy
                   a+G+HPh+a+++s+  + +l+++l++   +        k+vA GE+GLDy
    KIAA0218   576 AFGCHPHFARYYSESQERNLLQALRH---P--------KAVAFGEMGLDY 614  

                   ypvyakderrqfspkkevQeeevFraQleLAkelnlPvviHtRdAheaet
                           ++++ p  ++Q++ vF++Ql+LA  l++P+viH+R+A+e   
    KIAA0218   615 S-------YKCTTPV-PEQHK-VFERQLQLAVSLKKPLVIHCREADE--- 652  

                   dtleiLkee.gpkvggvlHcFtGsveeAkelldlG..fYisisGivTfKn
                   d+lei+k++ +p+ +++ HcFtGs+ + + ll++ +++ ++++ ++T++ 
    KIAA0218   653 DLLEIMKKFvPPDYKIHRHCFTGSYPVIEPLLKYFpnMSVGFTAVLTYSS 702  

                   taeelrevakeiPldrlLlETDaPylaP.reakrdvvPtHdeedPekkkl
                    a e+re++++iPl+r+++ETDaPy +P+       vP            
    KIAA0218   703 -AWEAREALRQIPLERIIVETDAPYFLPrQ------VP------------ 733  

                   rLpyrGkkrNePayvphvaekiAelkgisleevakitteNakrlFg<-*
                      +  ++  +P    h++++iA++k+ +l  + ++++eN+ rl++   
    KIAA0218   734 ---KSLCQYAHPGLALHTVREIARVKDQPLSLTLAALRENTSRLYS    776  

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