hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20335388/chunk_1/iprscan-20080501-20335388.nocrc
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Query sequence: KIAA0216
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00242                                                 170.7    1.5e-46   1
SM00228                                                  46.0    5.1e-09   1
SM00015                                                  32.3    6.7e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00228    1/1     242   324 ..     1    80 []    46.0  5.1e-09
SM00242    1/1     412  1199 ..     1   771 []   170.7  1.5e-46
SM00015    1/1    1200  1222 ..     1    23 []    32.3  6.7e-05

Alignments of top-scoring domains:
SM00228: domain 1 of 1, from 242 to 324: score 46.0, E = 5.1e-09
                   *->gglGfsivg.............gifvssvvpG.spAakaGrkslglL
                      g +Gfs++ ++  +++++++    +v   +pG +  + a +     L
    KIAA0216   242    GDFGFSLRRttmldrgpegqacRRVVHFAEPGaGTKDLALG-----L 283  

                   kvGDvIleVNGetsvegltheeavdllkkaggggvGekvtLtvlRgg<-*
                    +GD+++e+NG  +ve+++ +e+v++++++g+     +v+L+v++ +   
    KIAA0216   284 VPGDRLVEING-HNVESKSRDEIVEMIRQSGD-----SVRLKVQPIP    324  

SM00242: domain 1 of 1, from 412 to 1199: score 170.7, E = 1.5e-46
                   *->rnppkfegVeDmvlLtyLnEpavlhNLkkRYlkdlIYTYiGlvLvav
                       n p ++  eD++ L yLnE +vlh+L++RY   l +TY+G+ L ++
    KIAA0216   412    ANAPSCDRLEDLASLVYLNESSVLHTLRQRYGASLLHTYAGPSLLVL 458  

                   NPYkqlppiYtdevikkYrekkdldGksrgElpPHvFAiADeAYrnMlre
                    P      +Y++ v+++++      G++r++++PH++A+A  AYr+Ml  
    KIAA0216   459 GPRGAP-AVYSEKVMHMFK------GCRREDMAPHIYAVAQTAYRAMLMS 501  

                   keNQsIiISGESGAGKTEatKkimqYLAavsg....svesve..dqiLes
                   +++QsIi  G SG+GKT +  ++ qYLA ++g ++++v sve+ + +   
    KIAA0216   502 RQDQSIILLGSSGSGKTTSCQHLVQYLATIAGisgnKVFSVEkwQALYT- 550  

                   NPiLEAFGNAKTvRNnNSSRFGKfieIhFdekGkivGAkIenYLLEKSRV
                     +LEAFGN  T+ N N  RF     + Fd+ G +  A+I + LLEK RV
    KIAA0216   551 --LLEAFGNSPTIINGNATRFSQILSLDFDQAGQVASASIQTMLLEKLRV 598  

                   VsQakgERNYHIFYQLLaGaseelkkelgLskFSksped..YkYLnqggt
                    + +  E  + +FY+LLa  +  l+ el+L +    +e++ +  +     
    KIAA0216   599 ARRPASEATFNVFYYLLACGDGTLRTELHLNH---LAENnvFGIVPL--- 642  

                   pfankryssgcltvdgiDDaeeFkeTdEvtlkAmrvlGfseeEqesIFri
                                 +    a+ F +    ++ Am+vlG+s +Eq +++ i
    KIAA0216   643 ----------AKPEEKQKAAQQFSK----LQAAMKVLGISPDEQKACWFI 678  

                   lAAILHLGNieFeegrntgdnaavtslkvadeeelqkaAeLLgvdpeeLe
                   lAAI HLG    ++++   ++a+  ++  a +e +qkaA+LLg++ eeL 
    KIAA0216   679 LAAIYHLGAAGATKEA---AEAGRKQF--ARHEWAQKAAYLLGCSLEELS 723  

                   kaL.........tkRkiktggeggsvitkpln.....veqAvyaRDALAK
                    a+ ++++++++++R++  + +      + l ++++++  A+     +A 
    KIAA0216   724 SAIfkhqhkggtLQRSTSFRQG---PEESGLGdgtgpKLSALECLEGMAA 770  

                   aiYsRLFdWLVkrINksl.....sayfIGVLDIyGFEiFekN........
                   ++Ys LF  LV+ +N++l+++++s  ++ + D  GF     N++++++ +
    KIAA0216   771 GLYSELFTLLVSLVNRALkssqhSLCSMMIVDTPGF----QNpeqggsar 816  

                   ..SFEQfCINyaNEKLQQfFnqhvFKlEQEEYerEGIeWtfId...Ffli
                   + SFE +C Ny+  +LQ +F +++F++E E Y++E Ie  f d ++ ++ 
    KIAA0216   817 gaSFEELCHNYTQDRLQRLFHERTFVQELERYKEENIELAFDDlepPTD- 865  

                   DNQpciDLIEkKg........krPlGIlslLDEeClfHAqPkgTDqtFle
                   D  +++D    +   ++  ++ +  G+l lL+Ee l+   P ++ +t+le
    KIAA0216   866 DSVAAVDQASHQSlvrslartDEARGLLWLLEEEALV---PGASEDTLLE 912  

                   KLnkalyhqhhkkhphfskprkSlkk.gkp.kkrfgrt...aFiikHYAG
                   +L              + +p    ++++k++ +  +++++++F + H  G
    KIAA0216   913 RL------------FSYYGP---QEGdKKGqSPLLHSSkphHFLLGHSHG 947  

                   d..VtYnveGFL...eKNkDtLfedlieLlqsSknpliasLFpeeadqss
                   ++ V+Ynv+G+L+ +  N  +  ++   Llq S+ ++i +LF   a++++
    KIAA0216   948 TnwVEYNVTGWLnytKQN--PATQNAPRLLQDSQKKIISNLFLGRAGSAT 995  

                   saakekssggagksrkagrreps.k...................gt..i.
                                       ++s++  + +++++   ++ ++ ++t + +
    KIAA0216   996 --------------------VLSgSiagleggsqlalrratsmrKTftTg 1025 

                   sskkrppTvGsqFk.sLneLmetLnstnPHFIRCIKPNeeKkpg......
                   +   +++++  q k +   L++t+ ++  HF+ C  P  e  +g++++ +
    KIAA0216  1026 MAAVKKKSLCIQMKlQVDALIDTIKKSKLHFVHCFLPVAEGWAGeprsas 1075 

                   .......................vFdaslVlhQLrylGvLEniRIRraGF
                   +++ +++++ + +++++ + +  + d +l + QLr + +L++ R  r G+
    KIAA0216  1076 srrvsssseldlpsgdhceagllQLDVPLLRTQLRGSRLLDAMRMYRQGY 1125 

                   PyRlpfdeFlqRYkvLlpktwppwggewknr..lfgdakkacealLqslg
                   P  + f+eF++R+ vL+p   +  g     r+    d++ a+e lL+ l 
    KIAA0216  1126 PDHMVFSEFRRRFDVLAPHLTKKHG-----RnyIVVDERRAVEELLECLD 1170 

                   lgiegdnldeeeyqiGkTKvFlRnpgqlaeLEelRee<-*
                          l+++   +G + vF+R +g+la+LEe+R+e   
    KIAA0216  1171 -------LEKSSCCMGLSRVFFR-AGTLARLEEQRDE    1199 

SM00015: domain 1 of 1, from 1200 to 1222: score 32.3, E = 6.7e-05
                   *->rleraAiiIQaawRGylaRkryk<-*
                      +  r+ +++Qaa+RGylaR+++k   
    KIAA0216  1200    QTSRNLTLFQAACRGYLARQHFK    1222 

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