hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20290159/chunk_1/iprscan-20080501-20290159.nocrc
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Query sequence: KIAA0213
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 329.4    2.5e-94   1
SM00219                                                  45.0    6.4e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1    1361  1619 ..     1   280 []    45.0  6.4e-14
SM00220    1/1    1361  1619 ..     1   231 []   329.4  2.5e-94

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 1361 to 1619: score 45.0, E = 6.4e-14
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda.....keeFlr
                       + g k+GeG++G+Vy ++  ++++  A K ++   +++++++e  +
    KIAA0213  1361    WQRGNKIGEGQYGKVYTCISVdtgELMAMKEIRFQPndhktIKETAD 1407 

                   EakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGdLldy
                   E+ki   +  kHpN+V+ +Gv ++        e ++i mEy++ G L + 
    KIAA0213  1408 ELKIFEGI--KHPNLVRYFGVELHR-------EEMYIFMEYCDEGTLEE- 1447 

                   LrknrpklslsdLlsfAlQIAkGMeYLesknfvHRDLAARNcLvgenkvv
                      +r  l+      ++ QI    + L+++++vHRD+   N+ +++ + +
    KIAA0213  1448 --VSRLGLQEHVIRLYSKQITIAINVLHEHGIVHRDIKGANIFLTSSGLI 1495 

                   KIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPirWmAPEslkdgk
                   K +DFG s +l++           ++ +  ++  l     mAPE++   k
    KIAA0213  1496 KLGDFGCSVKLKNN-------AQTMPGE-VNST-LGTAAYMAPEVITRAK 1536 

                   ...FtskSDVWSFGVlLWEiftlGeqPYpgeiqqfmsneevleylkkGyR
                   +++   + D+WS G +  E+ t G+ P+ +       n++++ ++  G+ 
    KIAA0213  1537 gegHGRAADIWSLGCVVIEMVT-GKRPWHEY----EHNFQIMYKVGMGHK 1581 

                   lpkPendlpiSsvtCPdelYdlMlqCWaedPedRPtFsel..verl<-*
                   +p+Pe          ++e  d  + C + dP++R t s+l ++++    
    KIAA0213  1582 PPIPER--------LSPEGKDFLSHCLESDPKMRWTASQLldHSFV    1619 

SM00220: domain 1 of 1, from 1361 to 1619: score 329.4, E = 2.5e-94
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik.........erilr
                      ++ ++k+G+G +GkVy ++ ++tg+l+A+K+i+ +++++++ + +  
    KIAA0213  1361    WQRGNKIGEGQYGKVYTCISVDTGELMAMKEIRfqpndhktiKETAD 1407 

                   EikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkkrgrr
                   E+ki +  +HPN+V++++v  +++++y++mEyc+   G+L ++ +     
    KIAA0213  1408 ELKIFEGiKHPNLVRYFGVELHrEEMYIFMEYCDE--GTLEEVSRLG--- 1452 

                   glrkvlsE.earfyfrQilsaLeYLHsqgIiHRDLKPeNiLLds..hvKl
                        l E+++r y +Qi  a++ LH++gI+HRD+K +Ni+L+s++ +Kl
    KIAA0213  1453 -----LQEhVIRLYSKQITIAINVLHEHGIVHRDIKGANIFLTSsgLIKL 1497 

                   aDFGlArql...........ttfvGTpeYmAPEvl......gYgkpavDi
                   +DFG + +l+++ ++ +++ ++  GT  YmAPEv+++ +++g+g+ a+Di
    KIAA0213  1498 GDFGCSVKLknnaqtmpgevNSTLGTAAYMAPEVItrakgeGHGR-AADI 1546 

                   WSlGcilyElltGkpPFp....qldlifkkig..........SpeakdLi
                   WSlGc+++E++tGk P+++ +++ + ++k+ ++++++ +++ Spe+kd++
    KIAA0213  1547 WSLGCVVIEMVTGKRPWHeyehNFQIMYKVGMghkppiperlSPEGKDFL 1596 

                   kklLvkdPekRlta.eaLedeldikaHPff<-*
                   +++L+ dP+ R+ta+++L        H f+   
    KIAA0213  1597 SHCLESDPKMRWTAsQLLD-------HSFV    1619 

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